PDB Chemical Component ML2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ML2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C18 |
C16 |
1.514 |
1.507 |
| C16 |
N15 |
1.305 |
1.348 |
| C16 |
O17 |
1.236 |
1.212 |
| N15 |
C14 |
1.472 |
1.465 |
| C13 |
C14 |
1.556 |
1.531 |
| C13 |
C12 |
1.540 |
1.506 |
| C12 |
C2 |
1.411 |
1.343 |
| C12 |
C11 |
1.402 |
1.466 |
| I1 |
C2 |
2.044 |
2.095 |
| C2 |
N3 |
1.339 |
1.369 |
| C10 |
C11 |
1.422 |
1.396 |
| C10 |
C7 |
1.428 |
1.381 |
| C11 |
C4 |
1.417 |
1.406 |
| O8 |
C7 |
1.403 |
1.360 |
| O8 |
C9 |
1.444 |
1.429 |
| C7 |
C6 |
1.433 |
1.392 |
| N3 |
C4 |
1.320 |
1.380 |
| C4 |
C5 |
1.401 |
1.390 |
| C6 |
C5 |
1.413 |
1.378 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.080 |
1.080 |
| C9 |
H91 |
1.100 |
1.091 |
| C9 |
H92 |
1.100 |
1.090 |
| C9 |
H93 |
1.100 |
1.090 |
| C13 |
H131 |
1.100 |
1.089 |
| C13 |
H132 |
1.100 |
1.089 |
| N15 |
H15 |
1.000 |
0.969 |
| C18 |
H181 |
1.100 |
1.090 |
| C18 |
H182 |
1.100 |
1.090 |
| C18 |
H183 |
1.100 |
1.090 |
| N3 |
H3 |
1.000 |
0.969 |
| C10 |
H10 |
1.080 |
1.080 |
| C14 |
H141 |
1.100 |
1.089 |
| C14 |
H142 |
1.100 |
1.090 |
Bond Angles for ML2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C18 |
C16 |
O17 |
118.2 |
120.0 |
| C16 |
N15 |
C14 |
117.1 |
119.9 |
| C16 |
N15 |
H15 |
121.4 |
120.0 |
| C13 |
C14 |
N15 |
113.2 |
109.4 |
| C14 |
N15 |
H15 |
121.5 |
120.0 |
| N15 |
C14 |
H141 |
108.3 |
109.5 |
| N15 |
C14 |
H142 |
107.4 |
109.5 |
| C14 |
C13 |
H131 |
109.6 |
109.4 |
| C14 |
C13 |
H132 |
109.7 |
109.5 |
| C13 |
C14 |
H141 |
108.3 |
109.4 |
| C13 |
C14 |
H142 |
107.4 |
109.4 |
| C13 |
C12 |
C11 |
127.0 |
126.5 |
| C12 |
C2 |
N3 |
109.9 |
110.0 |
| C12 |
C11 |
C10 |
132.2 |
133.9 |
| I1 |
C2 |
N3 |
122.8 |
125.0 |
| C2 |
N3 |
C4 |
109.6 |
109.8 |
| C2 |
N3 |
H3 |
125.2 |
125.0 |
| C11 |
C10 |
H10 |
121.0 |
120.2 |
| O8 |
C9 |
H91 |
109.5 |
109.5 |
| O8 |
C9 |
H92 |
109.4 |
109.5 |
| O8 |
C9 |
H93 |
109.5 |
109.5 |
| C7 |
C6 |
H6 |
119.0 |
119.7 |
| C4 |
C5 |
H5 |
121.2 |
120.0 |
| C6 |
C5 |
H5 |
121.2 |
120.0 |
| H91 |
C9 |
H92 |
109.5 |
109.5 |
| H91 |
C9 |
H93 |
109.5 |
109.5 |
| H92 |
C9 |
H93 |
109.5 |
109.4 |
| H131 |
C13 |
H132 |
109.2 |
109.5 |
| H181 |
C18 |
H182 |
109.5 |
109.5 |
| H181 |
C18 |
H183 |
109.4 |
109.5 |
| H182 |
C18 |
H183 |
109.5 |
109.5 |
| H141 |
C14 |
H142 |
112.4 |
109.5 |
Torsion Angles for ML2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C18 |
C16 |
N15 |
C14 |
180.8 |
180.0 |
| C18 |
C16 |
N15 |
H15 |
0.8 |
0.0 |
| C13 |
C14 |
N15 |
C16 |
269.9 |
180.0 |
| C14 |
N15 |
C16 |
H15 |
180.0 |
180.0 |
| C16 |
N15 |
C14 |
H141 |
29.9 |
60.1 |
| C16 |
N15 |
C14 |
H142 |
151.5 |
300.0 |
| O17 |
C16 |
N15 |
C14 |
0.5 |
359.9 |
| O17 |
C16 |
N15 |
H15 |
180.5 |
179.9 |
| C16 |
N15 |
C14 |
H15 |
180.0 |
180.0 |
| N15 |
C14 |
C13 |
H131 |
279.5 |
60.0 |
| N15 |
C14 |
C13 |
H132 |
39.3 |
300.0 |
| C13 |
C14 |
N15 |
H141 |
240.0 |
120.0 |
| C13 |
C14 |
N15 |
H142 |
118.4 |
240.1 |
| H141 |
C14 |
N15 |
H142 |
238.4 |
120.1 |
| C16 |
N15 |
C14 |
C13 |
269.9 |
180.0 |
| C13 |
C14 |
N15 |
H15 |
89.8 |
0.0 |
| N15 |
C14 |
C13 |
H141 |
120.0 |
240.0 |
| N15 |
C14 |
C13 |
H142 |
241.6 |
120.0 |
| C14 |
C13 |
C12 |
C11 |
290.9 |
270.0 |
| H131 |
C13 |
C14 |
H132 |
240.2 |
120.0 |
| H141 |
C14 |
C13 |
H142 |
121.6 |
240.0 |
| C13 |
C12 |
C2 |
N3 |
179.8 |
180.0 |
| C13 |
C12 |
C11 |
C10 |
359.9 |
0.0 |
| I1 |
C2 |
C12 |
N3 |
180.2 |
180.3 |
| C12 |
C2 |
N3 |
C4 |
359.9 |
0.1 |
| C12 |
C2 |
N3 |
H3 |
179.9 |
180.0 |
| C11 |
C12 |
C2 |
N3 |
0.2 |
360.0 |
| C12 |
C11 |
C10 |
H10 |
0.6 |
360.0 |
| C12 |
C2 |
I1 |
N3 |
179.7 |
179.6 |
| I1 |
C2 |
N3 |
C4 |
179.7 |
179.8 |
| I1 |
C2 |
N3 |
H3 |
359.7 |
359.6 |
| C12 |
C11 |
C10 |
C7 |
180.6 |
180.0 |
| C10 |
C7 |
C6 |
H6 |
180.2 |
180.0 |
| C11 |
C4 |
C5 |
H5 |
179.7 |
180.0 |
| C7 |
O8 |
C9 |
H91 |
88.1 |
180.0 |
| C7 |
O8 |
C9 |
H92 |
208.0 |
300.0 |
| C7 |
O8 |
C9 |
H93 |
328.1 |
60.0 |
| O8 |
C7 |
C6 |
H6 |
0.6 |
360.0 |
| H91 |
C9 |
O8 |
H92 |
240.0 |
240.0 |
| H91 |
C9 |
O8 |
H93 |
120.0 |
120.0 |
| H92 |
C9 |
O8 |
H93 |
240.0 |
240.0 |
| C7 |
C6 |
C5 |
H5 |
180.2 |
180.0 |
| C2 |
N3 |
C4 |
H3 |
180.0 |
179.9 |
| N3 |
C4 |
C5 |
H5 |
359.4 |
359.8 |
| C2 |
N3 |
C4 |
C5 |
180.3 |
180.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
| H6 |
C6 |
C5 |
H5 |
0.2 |
0.1 |
| O8 |
C9 |
H91 |
H92 |
120.0 |
120.0 |
| O8 |
C9 |
H91 |
H93 |
240.0 |
239.9 |
| H92 |
C9 |
H91 |
H93 |
120.0 |
120.0 |
| O8 |
C9 |
H92 |
H91 |
240.0 |
240.0 |
| O8 |
C9 |
H92 |
H93 |
120.0 |
120.0 |
| H91 |
C9 |
H92 |
H93 |
240.0 |
240.0 |
| O8 |
C9 |
H93 |
H91 |
120.0 |
120.0 |
| O8 |
C9 |
H93 |
H92 |
240.0 |
240.0 |
| H91 |
C9 |
H93 |
H92 |
120.0 |
120.0 |
| H131 |
C13 |
C14 |
N15 |
279.5 |
60.0 |
| C14 |
C13 |
H131 |
H132 |
120.1 |
240.0 |
| H131 |
C13 |
C14 |
H141 |
159.5 |
180.0 |
| H131 |
C13 |
C14 |
H142 |
37.8 |
300.0 |
| H131 |
C13 |
C12 |
C11 |
170.9 |
30.0 |
| H132 |
C13 |
C14 |
N15 |
39.3 |
300.0 |
| C14 |
C13 |
H132 |
H131 |
239.9 |
120.0 |
| H132 |
C13 |
C14 |
H141 |
279.3 |
60.0 |
| H132 |
C13 |
C14 |
H142 |
157.7 |
180.0 |
| H132 |
C13 |
C12 |
C11 |
51.1 |
150.0 |
| C16 |
N15 |
H15 |
C14 |
180.0 |
180.0 |
| H15 |
N15 |
C14 |
H141 |
209.9 |
240.1 |
| H15 |
N15 |
C14 |
H142 |
331.5 |
120.0 |
| H181 |
C18 |
C16 |
O17 |
259.4 |
180.0 |
| H182 |
C18 |
H181 |
H183 |
120.0 |
120.0 |
| H182 |
C18 |
C16 |
O17 |
19.4 |
300.1 |
| H181 |
C18 |
H182 |
H183 |
240.0 |
240.0 |
| H183 |
C18 |
C16 |
O17 |
139.4 |
60.1 |
| H181 |
C18 |
H183 |
H182 |
120.0 |
120.0 |
| C2 |
N3 |
H3 |
C4 |
180.0 |
180.1 |
| C13 |
C14 |
H141 |
N15 |
123.0 |
240.0 |
| H141 |
C14 |
N15 |
H15 |
209.9 |
240.1 |
| N15 |
C14 |
H141 |
H142 |
118.5 |
239.9 |
| H141 |
C14 |
C13 |
H131 |
159.5 |
180.0 |
| H141 |
C14 |
C13 |
H132 |
279.3 |
60.0 |
| C13 |
C14 |
H141 |
H142 |
241.5 |
120.0 |
| C13 |
C14 |
H142 |
N15 |
238.0 |
120.0 |
| H142 |
C14 |
N15 |
H15 |
331.5 |
120.0 |
| N15 |
C14 |
H142 |
H141 |
241.0 |
120.1 |
| H142 |
C14 |
C13 |
H131 |
37.8 |
300.0 |
| H142 |
C14 |
C13 |
H132 |
157.7 |
180.0 |
| C13 |
C14 |
H142 |
H141 |
119.0 |
240.0 |