PDB Chemical Component MKC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MKC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.388 1.383
C1 C6 1.396 1.381
C1 C13 1.506 1.506
C2 C3 1.387 1.382
C2 H2 1.103 1.080
C3 C4 1.391 1.382
C3 H3 1.103 1.080
C4 C5 1.377 1.382
C4 H4 1.103 1.080
C5 C6 1.395 1.382
C5 H5 1.103 1.081
C6 H6 1.103 1.079
C7 N8 1.379 1.369
C7 C12 1.373 1.349
C7 C13 1.517 1.507
N8 C9 1.388 1.344
N8 C17 1.476 1.464
C9 O9 1.232 1.216
C9 N10 1.371 1.346
N10 C11 1.386 1.348
N10 HN1 1.020 0.971
C11 O11 1.227 1.218
C11 C12 1.430 1.415
C12 C14 1.519 1.507
C13 H131 1.115 1.090
C13 H132 1.114 1.090
C14 C15 1.514 1.530
C14 C16 1.502 1.528
C14 H14 1.116 1.090
C15 H151 1.115 1.090
C15 H152 1.114 1.090
C15 H153 1.115 1.090
C16 H161 1.114 1.090
C16 H162 1.115 1.091
C16 H163 1.115 1.091
C17 O17 1.427 1.429
C17 H171 1.115 1.090
C17 H172 1.115 1.090
O17 C18 1.436 1.428
C18 C19 1.485 1.531
C18 H181 1.115 1.090
C18 H182 1.115 1.090
C19 H191 1.115 1.089
C19 H192 1.114 1.090
C19 H193 1.114 1.090

Bond Angles for MKC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 118.5 120.0
C2 C1 C13 119.9 120.0
C1 C2 C3 120.6 120.0
C1 C2 H2 119.7 119.9
C6 C1 C13 121.1 120.0
C1 C6 C5 120.9 120.0
C1 C6 H6 119.6 120.0
C1 C13 C7 115.8 109.4
C1 C13 H131 109.9 109.5
C1 C13 H132 109.9 109.5
C3 C2 H2 119.6 120.1
C2 C3 C4 120.4 120.0
C2 C3 H3 119.7 120.0
C4 C3 H3 119.9 120.1
C3 C4 C5 119.7 120.0
C3 C4 H4 120.7 120.0
C5 C4 H4 119.6 120.0
C4 C5 C6 119.9 120.0
C4 C5 H5 119.4 120.0
C6 C5 H5 120.7 120.0
C5 C6 H6 119.5 119.9
N8 C7 C12 119.9 119.7
N8 C7 C13 118.0 120.1
C7 N8 C9 122.2 120.6
C7 N8 C17 120.3 119.7
C12 C7 C13 121.9 120.2
C7 C12 C11 121.0 119.2
C7 C12 C14 126.0 120.4
C7 C13 H131 109.9 109.5
C7 C13 H132 109.9 109.5
C9 N8 C17 117.3 119.7
N8 C9 O9 122.7 119.6
N8 C9 N10 116.0 120.9
N8 C17 O17 111.9 109.5
N8 C17 H171 111.3 109.5
N8 C17 H172 111.3 109.5
O9 C9 N10 121.3 119.5
C9 N10 C11 126.0 120.3
C9 N10 HN1 116.4 119.9
C11 N10 HN1 117.6 119.8
N10 C11 O11 120.9 120.4
N10 C11 C12 115.0 119.3
O11 C11 C12 124.1 120.3
C11 C12 C14 113.0 120.4
C12 C14 C15 114.7 109.4
C12 C14 C16 115.7 109.5
C12 C14 H14 102.3 109.5
H131 C13 H132 100.3 109.5
C15 C14 C16 114.1 109.5
C15 C14 H14 104.5 109.5
C14 C15 H151 114.7 109.4
C14 C15 H152 110.2 109.4
C14 C15 H153 110.3 109.5
C16 C14 H14 103.2 109.5
C14 C16 H161 115.7 109.5
C14 C16 H162 109.9 109.5
C14 C16 H163 109.9 109.5
H151 C15 H152 110.4 109.4
H151 C15 H153 110.3 109.5
H152 C15 H153 100.0 109.5
H161 C16 H162 110.0 109.4
H161 C16 H163 110.0 109.5
H162 C16 H163 100.3 109.4
O17 C17 H171 111.4 109.5
O17 C17 H172 111.4 109.5
C17 O17 C18 116.1 106.8
H171 C17 H172 99.0 109.5
O17 C18 C19 116.9 109.5
O17 C18 H181 109.5 109.6
O17 C18 H182 109.5 109.5
C19 C18 H181 109.6 109.4
C19 C18 H182 109.6 109.5
C18 C19 H191 116.9 109.5
C18 C19 H192 109.5 109.5
C18 C19 H193 109.5 109.5
H181 C18 H182 100.6 109.4
H191 C19 H192 109.5 109.5
H191 C19 H193 109.5 109.5
H192 C19 H193 100.7 109.5

Torsion Angles for MKC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C13 188.2 180.4
C2 C1 C6 C5 0.6 359.4
C2 C1 C6 H6 180.7 179.9
C2 C1 C13 C7 142.3 97.0
C2 C1 C13 H131 267.5 337.0
C2 C1 C13 H132 17.0 217.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 0.1 0.0
C1 C2 C3 H3 180.1 179.9
C2 C1 C6 C13 171.7 179.6
C6 C1 C2 C3 359.5 0.3
C6 C1 C2 H2 179.4 180.3
C6 C1 C13 C7 313.9 276.6
C6 C1 C13 H131 79.1 156.6
C6 C1 C13 H132 188.6 36.6
C4 C5 C6 C1 359.7 0.5
C1 C6 C5 H5 179.8 180.3
C5 C6 C1 H6 180.0 179.5
C2 C1 C13 C6 188.4 180.4
C13 C1 C2 C3 171.3 179.9
C13 C1 C2 H2 351.2 359.9
C13 C1 C6 C5 188.9 179.8
C13 C1 C6 H6 9.0 0.3
N8 C7 C13 C1 281.6 271.4
C12 C7 C13 C1 106.6 92.0
C7 C13 C1 H131 234.8 120.0
C7 C13 C1 H132 125.2 240.0
H131 C13 C1 H132 250.5 120.0
C3 C2 C1 C6 359.5 0.3
C3 C2 C1 C13 171.3 179.9
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.1
C2 C3 C4 C5 0.2 359.9
C2 C3 C4 H4 180.1 179.9
H2 C2 C1 C6 179.4 180.3
H2 C2 C1 C13 351.2 359.9
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 180.2 180.0
H2 C2 C3 H3 0.2 359.9
C4 C3 C2 H2 180.2 180.0
C2 C3 C4 H3 180.0 179.9
C5 C4 C3 H4 180.1 180.0
C3 C4 C5 C6 359.9 359.8
C3 C4 C5 H5 179.8 180.0
H3 C3 C2 H2 0.2 359.9
C2 C3 H3 C4 180.0 180.1
H3 C3 C4 C5 180.2 180.0
H3 C3 C4 H4 0.1 360.0
C1 C6 C5 C4 359.7 0.5
C5 C4 C3 H3 180.2 180.0
C3 C4 C5 H4 179.9 180.0
C6 C5 C4 H5 180.1 179.8
C4 C5 C6 H6 179.7 180.0
H4 C4 C3 H3 0.1 360.0
C3 C4 H4 C5 180.1 180.0
H4 C4 C5 C6 179.9 179.8
H4 C4 C5 H5 359.9 0.0
C5 C6 C1 C13 188.9 179.8
C1 C6 C5 H6 180.0 180.5
C6 C5 C4 H4 179.9 179.8
C4 C5 C6 H5 179.9 180.2
H5 C5 C4 H4 359.9 0.0
C4 C5 H5 C6 180.1 179.8
H5 C5 C6 H6 359.7 359.8
H6 C6 C1 C13 9.0 0.3
C1 C6 H6 C5 180.0 179.5
H6 C6 C5 H5 359.7 359.8
C1 C13 C7 N8 281.6 271.4
C12 C7 N8 C13 175.1 179.4
N8 C7 C12 C11 0.3 0.6
N8 C7 C12 C14 183.1 180.3
N8 C7 C13 H131 156.4 31.5
N8 C7 C13 H132 46.9 151.5
C9 N8 C7 C17 174.3 179.7
C7 N8 C9 O9 176.0 180.3
C7 N8 C9 N10 358.7 0.3
C7 N8 C17 O17 281.1 87.4
C7 N8 C17 H171 46.4 327.4
C7 N8 C17 H172 155.8 207.4
C1 C13 C7 C12 106.6 92.0
N8 C7 C12 C13 185.1 180.6
C12 C7 N8 C9 1.1 359.4
C12 C7 N8 C17 186.8 179.7
C12 C7 C13 H131 341.4 212.0
C12 C7 C13 H132 231.9 332.0
N10 C11 C12 C7 358.6 359.7
O11 C11 C12 C7 177.5 179.7
C11 C12 C7 C14 177.3 180.3
C7 C12 C14 C15 78.7 116.4
C7 C12 C14 C16 302.6 236.3
C7 C12 C14 H14 191.2 356.4
C1 C13 C7 H131 125.2 240.0
C1 C13 C7 H132 234.8 120.0
N8 C7 C13 C12 175.0 179.4
C13 C7 N8 C9 186.0 180.0
C13 C7 N8 C17 11.7 0.3
C13 C7 C12 C11 175.2 180.0
C13 C7 C12 C14 357.9 359.7
H131 C13 C7 H132 109.5 240.0
C9 N8 C7 C12 1.1 359.4
C9 N8 C7 C13 186.0 180.0
C7 N8 C9 C17 185.6 180.3
C9 N8 C17 O17 106.5 267.7
C9 N8 C17 H171 231.8 147.7
C9 N8 C17 H172 341.2 27.6
O9 C9 N8 N10 177.3 180.1
N8 C9 N10 C11 0.0 360.0
N8 C9 N10 HN1 180.1 180.0
C17 N8 C7 C12 186.8 179.7
C17 N8 C7 C13 11.7 0.3
C7 N8 C17 C9 174.6 179.7
C17 N8 C9 O9 350.5 0.1
C17 N8 C9 N10 173.2 180.0
O17 C17 N8 H171 234.7 120.0
O17 C17 N8 H172 125.3 240.0
N8 C17 O17 C18 277.6 79.4
H171 C17 N8 H172 250.6 120.0
O9 C9 N8 C17 350.5 0.1
N8 C9 O9 N10 182.8 179.9
O9 C9 N10 C11 182.7 179.9
O9 C9 N10 HN1 2.7 359.9
N10 C9 N8 C17 173.2 180.0
N8 C9 N10 O9 177.3 180.1
C11 N10 C9 HN1 180.0 180.0
C9 N10 C11 O11 182.3 180.0
C9 N10 C11 C12 1.3 0.0
C7 C12 C11 N10 358.6 359.7
C9 N10 C11 HN1 180.0 180.0
O11 C11 N10 C12 181.1 180.0
N10 C11 C12 C14 176.2 180.0
C9 N10 HN1 C11 180.0 180.0
HN1 N10 C11 O11 2.3 0.0
HN1 N10 C11 C12 181.2 180.0
C7 C12 C11 O11 177.5 179.7
O11 C11 N10 HN1 2.3 0.0
N10 C11 O11 C12 178.8 180.0
O11 C11 C12 C14 355.0 360.0
C11 C12 C7 C13 175.2 180.0
C7 C12 C11 C14 182.4 179.7
C12 C11 N10 HN1 181.2 180.0
N10 C11 C12 O11 181.1 180.0
C11 C12 C14 C15 261.2 296.1
C11 C12 C14 C16 125.2 56.1
C11 C12 C14 H14 13.8 176.1
C14 C12 C7 C13 357.9 359.7
C7 C12 C14 C11 177.4 180.3
C15 C14 C12 C16 136.1 240.0
C15 C14 C12 H14 247.5 120.0
C12 C14 C15 H151 180.0 180.1
C12 C14 C15 H152 305.3 299.9
C12 C14 C15 H153 54.7 60.0
C16 C14 C12 H14 111.4 240.0
C12 C14 C16 H161 180.0 300.0
C12 C14 C16 H162 305.3 60.0
C12 C14 C16 H163 54.7 180.0
C1 C13 H131 C7 231.5 120.0
C1 C13 H131 H132 115.7 240.0
C7 C13 H131 H132 244.3 120.0
C1 C13 H132 C7 128.5 240.0
C1 C13 H132 H131 244.3 120.0
C7 C13 H132 H131 115.8 240.0
C12 C14 C15 C16 223.2 120.0
C12 C14 C15 H14 111.2 240.0
C16 C14 C15 H14 248.0 120.0
C15 C14 C16 H161 43.7 60.0
C15 C14 C16 H162 168.9 180.0
C15 C14 C16 H163 278.4 300.0
H151 C15 C14 H152 234.7 240.1
H151 C15 C14 H153 125.2 120.1
H152 C15 C14 H153 250.5 239.9
C12 C14 C16 C15 136.3 240.0
C12 C14 C16 H14 249.1 120.0
C15 C14 C16 H14 112.8 240.0
C16 C14 C15 H151 316.8 60.1
C16 C14 C15 H152 82.0 179.9
C16 C14 C15 H153 191.5 300.0
H161 C16 C14 H162 234.7 240.0
H161 C16 C14 H163 125.3 120.0
H162 C16 C14 H163 250.6 240.0
C12 C14 H14 C15 240.1 120.0
C12 C14 H14 C16 120.5 240.0
C15 C14 H14 C16 240.4 120.0
H14 C14 C15 H151 68.8 300.1
H14 C14 C15 H152 194.1 59.9
H14 C14 C15 H153 303.6 180.0
H14 C14 C16 H161 290.9 180.0
H14 C14 C16 H162 56.1 300.0
H14 C14 C16 H163 165.6 60.0
H151 C15 C14 C16 316.8 60.1
H151 C15 C14 H14 68.8 300.1
C14 C15 H151 H152 125.2 119.9
C14 C15 H151 H153 234.8 240.0
H152 C15 H151 H153 109.6 120.1
H152 C15 C14 C16 82.0 179.9
H152 C15 C14 H14 194.1 59.9
C14 C15 H152 H151 232.3 240.1
C14 C15 H152 H153 116.1 120.0
H151 C15 H152 H153 243.8 239.9
H153 C15 C14 C16 191.5 300.0
H153 C15 C14 H14 303.6 180.0
C14 C15 H153 H151 127.7 120.0
C14 C15 H153 H152 243.9 240.0
H151 C15 H153 H152 116.2 120.0
H161 C16 C14 H14 290.9 180.0
C14 C16 H161 H162 125.2 120.0
C14 C16 H161 H163 234.7 240.0
H162 C16 H161 H163 109.5 119.9
H162 C16 C14 H14 56.1 300.0
C14 C16 H162 H161 231.5 240.0
C14 C16 H162 H163 115.7 120.0
H161 C16 H162 H163 244.2 240.0
H163 C16 C14 H14 165.6 60.0
C14 C16 H163 H161 128.5 120.0
C14 C16 H163 H162 244.3 240.0
H161 C16 H163 H162 115.8 119.9
N8 C17 O17 H171 125.3 240.0
N8 C17 O17 H172 234.7 120.0
H171 C17 O17 H172 109.5 240.0
C17 O17 C18 C19 169.5 174.5
C17 O17 C18 H181 294.8 54.5
C17 O17 C18 H182 44.2 294.5
N8 C17 H171 O17 234.4 120.0
N8 C17 H171 H172 117.2 240.0
O17 C17 H171 H172 242.7 120.0
H171 C17 O17 C18 152.4 199.4
N8 C17 H172 O17 125.6 240.0
N8 C17 H172 H171 242.8 120.0
O17 C17 H172 H171 117.3 240.0
H172 C17 O17 C18 42.9 319.5
C18 O17 C17 H171 152.4 199.4
C18 O17 C17 H172 42.9 319.5
C19 C18 O17 H181 234.7 120.0
C19 C18 O17 H182 125.3 240.0
O17 C18 C19 H191 180.0 179.9
O17 C18 C19 H192 305.3 300.0
O17 C18 C19 H193 54.8 60.0
H181 C18 O17 H182 250.6 120.0
O17 C18 C19 H181 125.3 239.9
O17 C18 C19 H182 234.7 120.0
H181 C18 C19 H182 109.5 240.1
H191 C19 C18 H192 234.7 239.9
H191 C19 C18 H193 125.2 120.0
H192 C19 C18 H193 250.5 240.0
O17 C18 H181 C19 230.5 120.0
O17 C18 H181 H182 115.2 239.9
C19 C18 H181 H182 244.7 119.9
H181 C18 C19 H191 54.7 300.1
H181 C18 C19 H192 180.0 60.1
H181 C18 C19 H193 289.5 180.1
O17 C18 H182 C19 129.4 240.0
O17 C18 H182 H181 244.8 120.1
C19 C18 H182 H181 115.4 240.1
H182 C18 C19 H191 305.3 59.9
H182 C18 C19 H192 70.5 180.0
H182 C18 C19 H193 180.0 300.0
H191 C19 C18 H181 54.7 300.1
H191 C19 C18 H182 305.3 59.9
C18 C19 H191 H192 125.2 120.0
C18 C19 H191 H193 234.8 240.0
H192 C19 H191 H193 109.5 120.0
H192 C19 C18 H181 180.0 60.1
H192 C19 C18 H182 70.5 180.0
C18 C19 H192 H191 230.6 240.0
C18 C19 H192 H193 115.3 120.0
H191 C19 H192 H193 244.7 240.0
H193 C19 C18 H181 289.5 180.1
H193 C19 C18 H182 180.0 300.0
C18 C19 H193 H191 129.4 120.0
C18 C19 H193 H192 244.7 240.0
H191 C19 H193 H192 115.3 120.0