PDB Chemical Component MK2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MK2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C1 |
1.379 |
1.387 |
C1 |
C3 |
1.377 |
1.368 |
C1 |
H1 |
1.080 |
1.080 |
C2 |
C4 |
1.379 |
1.380 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
C11 |
1.388 |
1.395 |
C3 |
H3 |
1.079 |
1.080 |
C4 |
C12 |
1.373 |
1.389 |
C4 |
H4 |
1.080 |
1.080 |
C13 |
C5 |
1.381 |
1.397 |
C5 |
C6 |
1.374 |
1.381 |
C5 |
H5 |
1.080 |
1.079 |
C6 |
N22 |
1.338 |
1.326 |
C6 |
H6 |
1.080 |
1.080 |
C11 |
C7 |
1.422 |
1.465 |
C17 |
C7 |
1.385 |
1.355 |
C7 |
H7 |
1.080 |
1.080 |
C15 |
C8 |
1.378 |
1.400 |
C8 |
C14 |
1.381 |
1.382 |
C8 |
H8 |
1.079 |
1.080 |
C16 |
C9 |
1.379 |
1.390 |
C9 |
C14 |
1.386 |
1.392 |
C9 |
H9 |
1.080 |
1.080 |
N23 |
C10 |
1.368 |
1.303 |
C10 |
C15 |
1.378 |
1.460 |
C10 |
H10 |
1.080 |
1.080 |
C12 |
C11 |
1.386 |
1.406 |
C12 |
O26 |
1.368 |
1.349 |
N25 |
C13 |
1.397 |
1.386 |
C13 |
N24 |
1.333 |
1.329 |
C14 |
N25 |
1.410 |
1.401 |
C18 |
C15 |
1.415 |
1.406 |
C17 |
C16 |
1.455 |
1.476 |
C18 |
C16 |
1.382 |
1.405 |
O26 |
C17 |
1.372 |
1.348 |
N21 |
C18 |
1.347 |
1.370 |
N24 |
C19 |
1.337 |
1.324 |
N20 |
C19 |
1.393 |
1.384 |
C19 |
N22 |
1.353 |
1.325 |
N20 |
HN20 |
1.000 |
0.970 |
N20 |
HN2A |
1.000 |
0.970 |
N21 |
N23 |
1.351 |
1.399 |
N25 |
HN25 |
1.000 |
0.970 |
N21 |
HN21 |
1.000 |
0.969 |
Bond Angles for MK2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C3 |
121.2 |
120.4 |
C2 |
C1 |
H1 |
119.4 |
119.8 |
C3 |
C1 |
H1 |
119.5 |
119.8 |
C1 |
C3 |
C11 |
116.7 |
119.7 |
C1 |
C3 |
H3 |
121.7 |
120.2 |
C4 |
C2 |
H2 |
118.1 |
119.7 |
C2 |
C4 |
C12 |
113.9 |
119.8 |
C2 |
C4 |
H4 |
123.0 |
120.0 |
C11 |
C3 |
H3 |
121.6 |
120.1 |
C3 |
C11 |
C7 |
134.3 |
134.2 |
C12 |
C4 |
H4 |
123.1 |
120.2 |
C4 |
C12 |
C11 |
124.3 |
119.2 |
C4 |
C12 |
O26 |
125.0 |
133.2 |
C13 |
C5 |
H5 |
121.4 |
120.8 |
C6 |
C5 |
H5 |
121.4 |
120.7 |
C5 |
C6 |
N22 |
122.2 |
119.3 |
C5 |
C6 |
H6 |
118.9 |
120.4 |
N22 |
C6 |
H6 |
118.9 |
120.3 |
C6 |
N22 |
C19 |
115.9 |
120.9 |
C11 |
C7 |
H7 |
126.4 |
127.0 |
C17 |
C7 |
H7 |
126.4 |
126.9 |
C15 |
C8 |
H8 |
125.3 |
120.1 |
C14 |
C8 |
H8 |
125.3 |
120.0 |
C8 |
C14 |
C9 |
123.1 |
120.5 |
C8 |
C14 |
N25 |
123.1 |
119.8 |
C16 |
C9 |
H9 |
116.8 |
119.8 |
C14 |
C9 |
H9 |
116.8 |
119.8 |
C9 |
C14 |
N25 |
113.8 |
119.7 |
N23 |
C10 |
H10 |
128.0 |
126.1 |
C15 |
C10 |
H10 |
128.0 |
126.2 |
C12 |
O26 |
C17 |
107.0 |
110.9 |
C13 |
N24 |
C19 |
115.8 |
120.6 |
C14 |
N25 |
HN25 |
116.7 |
120.0 |
N20 |
C19 |
N22 |
121.3 |
119.2 |
HN20 |
N20 |
HN2A |
109.5 |
120.0 |
N23 |
N21 |
HN21 |
127.6 |
125.5 |
Torsion Angles for MK2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
C2 |
C1 |
C3 |
C11 |
0.0 |
359.8 |
C2 |
C1 |
C3 |
H3 |
180.0 |
179.7 |
C2 |
C1 |
C3 |
H1 |
180.0 |
179.8 |
C11 |
C3 |
C1 |
H3 |
180.0 |
180.1 |
C1 |
C3 |
C11 |
C7 |
180.2 |
180.0 |
C2 |
C1 |
H1 |
C3 |
180.0 |
180.2 |
H1 |
C1 |
C3 |
C11 |
180.0 |
180.0 |
H1 |
C1 |
C3 |
H3 |
360.0 |
359.9 |
C4 |
C2 |
C1 |
C3 |
359.9 |
360.0 |
C4 |
C2 |
C1 |
H1 |
180.0 |
179.8 |
C12 |
C4 |
C2 |
H4 |
180.0 |
180.0 |
C2 |
C4 |
C12 |
C11 |
0.2 |
0.2 |
C2 |
C4 |
C12 |
O26 |
179.9 |
180.0 |
H2 |
C2 |
C1 |
C3 |
179.9 |
180.0 |
H2 |
C2 |
C1 |
H1 |
360.0 |
359.8 |
H2 |
C2 |
C4 |
C12 |
180.0 |
180.0 |
H2 |
C2 |
C4 |
H4 |
0.0 |
360.0 |
C11 |
C3 |
C1 |
H1 |
180.0 |
180.0 |
C1 |
C3 |
C11 |
H3 |
180.0 |
179.9 |
C4 |
C12 |
C11 |
C3 |
359.8 |
359.5 |
C3 |
C11 |
C7 |
H7 |
0.2 |
360.0 |
H3 |
C3 |
C1 |
H1 |
360.0 |
359.9 |
C1 |
C3 |
H3 |
C11 |
180.0 |
180.1 |
H3 |
C3 |
C11 |
C7 |
0.2 |
0.1 |
C12 |
C4 |
C2 |
H2 |
180.0 |
180.0 |
C2 |
C4 |
C12 |
H4 |
180.0 |
180.0 |
C4 |
C12 |
O26 |
C17 |
180.0 |
180.0 |
H4 |
C4 |
C2 |
H2 |
0.0 |
360.0 |
C2 |
C4 |
H4 |
C12 |
180.0 |
180.0 |
H4 |
C4 |
C12 |
C11 |
180.1 |
180.3 |
H4 |
C4 |
C12 |
O26 |
359.9 |
0.0 |
C6 |
C5 |
C13 |
H5 |
180.0 |
179.7 |
C13 |
C5 |
C6 |
N22 |
360.0 |
0.2 |
C13 |
C5 |
C6 |
H6 |
180.0 |
180.3 |
C13 |
C5 |
C6 |
H5 |
180.0 |
180.3 |
N22 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
N22 |
C19 |
0.1 |
0.0 |
H5 |
C5 |
C6 |
N22 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
360.0 |
0.0 |
N22 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
N22 |
H6 |
180.0 |
180.0 |
N20 |
C19 |
N22 |
C6 |
180.5 |
180.0 |
H6 |
C6 |
C5 |
H5 |
360.0 |
0.0 |
C5 |
C6 |
H6 |
N22 |
180.0 |
180.0 |
H6 |
C6 |
N22 |
C19 |
180.1 |
180.0 |
C7 |
C11 |
C3 |
H3 |
0.2 |
0.1 |
C4 |
C12 |
C11 |
C7 |
179.7 |
179.9 |
C17 |
C7 |
C11 |
H7 |
180.0 |
180.5 |
C11 |
C7 |
C17 |
H7 |
180.0 |
179.5 |
C14 |
C8 |
C15 |
H8 |
180.0 |
179.8 |
C15 |
C8 |
C14 |
N25 |
180.3 |
180.2 |
C15 |
C8 |
C14 |
H8 |
180.0 |
180.2 |
C8 |
C14 |
C9 |
H9 |
179.4 |
180.0 |
C9 |
C14 |
C8 |
N25 |
180.4 |
180.0 |
C8 |
C14 |
N25 |
HN25 |
180.0 |
326.9 |
H8 |
C8 |
C14 |
C9 |
180.7 |
180.0 |
H8 |
C8 |
C14 |
N25 |
0.3 |
0.0 |
C14 |
C9 |
C16 |
H9 |
180.0 |
180.7 |
C16 |
C9 |
C14 |
N25 |
179.8 |
179.4 |
C9 |
C14 |
C8 |
H8 |
180.7 |
180.0 |
C8 |
C14 |
C9 |
N25 |
179.6 |
180.0 |
C16 |
C9 |
C14 |
H9 |
180.0 |
179.3 |
C9 |
C14 |
N25 |
HN25 |
359.6 |
146.9 |
H9 |
C9 |
C14 |
N25 |
359.7 |
0.1 |
C15 |
C10 |
N23 |
H10 |
180.0 |
179.9 |
C10 |
C15 |
C8 |
H8 |
359.6 |
0.2 |
N23 |
C10 |
C15 |
H10 |
180.0 |
180.1 |
C12 |
C11 |
C3 |
H3 |
180.1 |
180.5 |
C11 |
C12 |
C4 |
H4 |
180.1 |
180.3 |
C4 |
C12 |
C11 |
O26 |
179.8 |
179.8 |
C12 |
C11 |
C7 |
H7 |
180.3 |
179.6 |
O26 |
C12 |
C4 |
H4 |
359.9 |
0.0 |
C4 |
C12 |
O26 |
C11 |
180.2 |
180.2 |
N25 |
C13 |
C5 |
H5 |
359.5 |
0.2 |
C8 |
C14 |
N25 |
C13 |
0.0 |
146.9 |
C9 |
C14 |
N25 |
C13 |
179.7 |
326.9 |
N24 |
C13 |
C5 |
H5 |
179.9 |
180.3 |
N25 |
C14 |
C8 |
H8 |
0.3 |
0.0 |
C8 |
C14 |
N25 |
C9 |
180.4 |
180.0 |
N25 |
C14 |
C9 |
H9 |
359.7 |
0.1 |
C18 |
C15 |
C8 |
H8 |
179.7 |
180.3 |
C18 |
C15 |
C10 |
H10 |
179.6 |
180.0 |
C16 |
C17 |
C7 |
H7 |
0.7 |
360.0 |
C17 |
C16 |
C9 |
H9 |
357.8 |
359.4 |
C12 |
O26 |
C17 |
C16 |
179.4 |
180.6 |
C18 |
C16 |
C9 |
H9 |
180.0 |
180.0 |
O26 |
C17 |
C7 |
H7 |
179.6 |
180.3 |
C6 |
N22 |
C19 |
N20 |
180.5 |
180.0 |
C13 |
N24 |
C19 |
N20 |
179.4 |
180.4 |
C19 |
N22 |
C6 |
H6 |
180.1 |
180.0 |
C13 |
N24 |
C19 |
N22 |
359.9 |
0.9 |
HN20 |
N20 |
C19 |
N22 |
179.5 |
0.0 |
HN2A |
N20 |
C19 |
N22 |
299.6 |
180.0 |
N21 |
N23 |
C10 |
H10 |
180.3 |
180.0 |