PDB Chemical Component MK2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MK2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.379 1.387
C1 C3 1.377 1.368
C1 H1 1.080 1.080
C2 C4 1.379 1.380
C2 H2 1.080 1.080
C3 C11 1.388 1.395
C3 H3 1.079 1.080
C4 C12 1.373 1.389
C4 H4 1.080 1.080
C13 C5 1.381 1.397
C5 C6 1.374 1.381
C5 H5 1.080 1.079
C6 N22 1.338 1.326
C6 H6 1.080 1.080
C11 C7 1.422 1.465
C17 C7 1.385 1.355
C7 H7 1.080 1.080
C15 C8 1.378 1.400
C8 C14 1.381 1.382
C8 H8 1.079 1.080
C16 C9 1.379 1.390
C9 C14 1.386 1.392
C9 H9 1.080 1.080
N23 C10 1.368 1.303
C10 C15 1.378 1.460
C10 H10 1.080 1.080
C12 C11 1.386 1.406
C12 O26 1.368 1.349
N25 C13 1.397 1.386
C13 N24 1.333 1.329
C14 N25 1.410 1.401
C18 C15 1.415 1.406
C17 C16 1.455 1.476
C18 C16 1.382 1.405
O26 C17 1.372 1.348
N21 C18 1.347 1.370
N24 C19 1.337 1.324
N20 C19 1.393 1.384
C19 N22 1.353 1.325
N20 HN20 1.000 0.970
N20 HN2A 1.000 0.970
N21 N23 1.351 1.399
N25 HN25 1.000 0.970
N21 HN21 1.000 0.969

Bond Angles for MK2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C3 121.2 120.4
C2 C1 H1 119.4 119.8
C3 C1 H1 119.5 119.8
C1 C3 C11 116.7 119.7
C1 C3 H3 121.7 120.2
C4 C2 H2 118.1 119.7
C2 C4 C12 113.9 119.8
C2 C4 H4 123.0 120.0
C11 C3 H3 121.6 120.1
C3 C11 C7 134.3 134.2
C12 C4 H4 123.1 120.2
C4 C12 C11 124.3 119.2
C4 C12 O26 125.0 133.2
C13 C5 H5 121.4 120.8
C6 C5 H5 121.4 120.7
C5 C6 N22 122.2 119.3
C5 C6 H6 118.9 120.4
N22 C6 H6 118.9 120.3
C6 N22 C19 115.9 120.9
C11 C7 H7 126.4 127.0
C17 C7 H7 126.4 126.9
C15 C8 H8 125.3 120.1
C14 C8 H8 125.3 120.0
C8 C14 C9 123.1 120.5
C8 C14 N25 123.1 119.8
C16 C9 H9 116.8 119.8
C14 C9 H9 116.8 119.8
C9 C14 N25 113.8 119.7
N23 C10 H10 128.0 126.1
C15 C10 H10 128.0 126.2
C12 O26 C17 107.0 110.9
C13 N24 C19 115.8 120.6
C14 N25 HN25 116.7 120.0
N20 C19 N22 121.3 119.2
HN20 N20 HN2A 109.5 120.0
N23 N21 HN21 127.6 125.5

Torsion Angles for MK2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C1 C2 H1 180.0 180.2
C2 C1 C3 C11 0.0 359.8
C2 C1 C3 H3 180.0 179.7
C2 C1 C3 H1 180.0 179.8
C11 C3 C1 H3 180.0 180.1
C1 C3 C11 C7 180.2 180.0
C2 C1 H1 C3 180.0 180.2
H1 C1 C3 C11 180.0 180.0
H1 C1 C3 H3 360.0 359.9
C4 C2 C1 C3 359.9 360.0
C4 C2 C1 H1 180.0 179.8
C12 C4 C2 H4 180.0 180.0
C2 C4 C12 C11 0.2 0.2
C2 C4 C12 O26 179.9 180.0
H2 C2 C1 C3 179.9 180.0
H2 C2 C1 H1 360.0 359.8
H2 C2 C4 C12 180.0 180.0
H2 C2 C4 H4 0.0 360.0
C11 C3 C1 H1 180.0 180.0
C1 C3 C11 H3 180.0 179.9
C4 C12 C11 C3 359.8 359.5
C3 C11 C7 H7 0.2 360.0
H3 C3 C1 H1 360.0 359.9
C1 C3 H3 C11 180.0 180.1
H3 C3 C11 C7 0.2 0.1
C12 C4 C2 H2 180.0 180.0
C2 C4 C12 H4 180.0 180.0
C4 C12 O26 C17 180.0 180.0
H4 C4 C2 H2 0.0 360.0
C2 C4 H4 C12 180.0 180.0
H4 C4 C12 C11 180.1 180.3
H4 C4 C12 O26 359.9 0.0
C6 C5 C13 H5 180.0 179.7
C13 C5 C6 N22 360.0 0.2
C13 C5 C6 H6 180.0 180.3
C13 C5 C6 H5 180.0 180.3
N22 C6 C5 H6 180.0 180.0
C5 C6 N22 C19 0.1 0.0
H5 C5 C6 N22 180.0 180.0
H5 C5 C6 H6 360.0 0.0
N22 C6 C5 H5 180.0 180.0
C5 C6 N22 H6 180.0 180.0
N20 C19 N22 C6 180.5 180.0
H6 C6 C5 H5 360.0 0.0
C5 C6 H6 N22 180.0 180.0
H6 C6 N22 C19 180.1 180.0
C7 C11 C3 H3 0.2 0.1
C4 C12 C11 C7 179.7 179.9
C17 C7 C11 H7 180.0 180.5
C11 C7 C17 H7 180.0 179.5
C14 C8 C15 H8 180.0 179.8
C15 C8 C14 N25 180.3 180.2
C15 C8 C14 H8 180.0 180.2
C8 C14 C9 H9 179.4 180.0
C9 C14 C8 N25 180.4 180.0
C8 C14 N25 HN25 180.0 326.9
H8 C8 C14 C9 180.7 180.0
H8 C8 C14 N25 0.3 0.0
C14 C9 C16 H9 180.0 180.7
C16 C9 C14 N25 179.8 179.4
C9 C14 C8 H8 180.7 180.0
C8 C14 C9 N25 179.6 180.0
C16 C9 C14 H9 180.0 179.3
C9 C14 N25 HN25 359.6 146.9
H9 C9 C14 N25 359.7 0.1
C15 C10 N23 H10 180.0 179.9
C10 C15 C8 H8 359.6 0.2
N23 C10 C15 H10 180.0 180.1
C12 C11 C3 H3 180.1 180.5
C11 C12 C4 H4 180.1 180.3
C4 C12 C11 O26 179.8 179.8
C12 C11 C7 H7 180.3 179.6
O26 C12 C4 H4 359.9 0.0
C4 C12 O26 C11 180.2 180.2
N25 C13 C5 H5 359.5 0.2
C8 C14 N25 C13 0.0 146.9
C9 C14 N25 C13 179.7 326.9
N24 C13 C5 H5 179.9 180.3
N25 C14 C8 H8 0.3 0.0
C8 C14 N25 C9 180.4 180.0
N25 C14 C9 H9 359.7 0.1
C18 C15 C8 H8 179.7 180.3
C18 C15 C10 H10 179.6 180.0
C16 C17 C7 H7 0.7 360.0
C17 C16 C9 H9 357.8 359.4
C12 O26 C17 C16 179.4 180.6
C18 C16 C9 H9 180.0 180.0
O26 C17 C7 H7 179.6 180.3
C6 N22 C19 N20 180.5 180.0
C13 N24 C19 N20 179.4 180.4
C19 N22 C6 H6 180.1 180.0
C13 N24 C19 N22 359.9 0.9
HN20 N20 C19 N22 179.5 0.0
HN2A N20 C19 N22 299.6 180.0
N21 N23 C10 H10 180.3 180.0