PDB Chemical Component MJF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MJF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O18 |
C8 |
1.224 |
1.213 |
C8 |
C2 |
1.500 |
1.470 |
C8 |
C9 |
1.515 |
1.507 |
C2 |
C3 |
1.390 |
1.399 |
C2 |
C1 |
1.387 |
1.399 |
C3 |
C4 |
1.392 |
1.378 |
C4 |
C5 |
1.390 |
1.386 |
C5 |
CL7 |
1.793 |
1.736 |
C5 |
C6 |
1.385 |
1.385 |
C6 |
C1 |
1.386 |
1.379 |
C9 |
C10 |
1.538 |
1.530 |
C10 |
C11 |
1.537 |
1.530 |
C10 |
C19 |
1.490 |
1.507 |
C11 |
C15 |
1.501 |
1.507 |
C11 |
C12 |
1.499 |
1.507 |
C15 |
O17 |
1.249 |
1.343 |
C15 |
O16 |
1.244 |
1.208 |
C12 |
O14 |
1.258 |
1.343 |
C12 |
O13 |
1.256 |
1.208 |
C19 |
C24 |
1.395 |
1.382 |
C19 |
C20 |
1.393 |
1.382 |
C24 |
C23 |
1.399 |
1.382 |
C23 |
C22 |
1.397 |
1.382 |
C22 |
C21 |
1.394 |
1.382 |
C21 |
C20 |
1.394 |
1.383 |
C9 |
H91C |
1.100 |
1.091 |
C9 |
H92C |
1.100 |
1.091 |
C3 |
H3 |
1.080 |
1.080 |
C1 |
H1 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C6 |
H6 |
1.079 |
1.080 |
C10 |
H10 |
1.100 |
1.090 |
C11 |
H11 |
1.100 |
1.090 |
O17 |
H17 |
0.950 |
0.966 |
O14 |
H14 |
0.950 |
0.967 |
C24 |
H24 |
1.080 |
1.080 |
C20 |
H20 |
1.080 |
1.080 |
C23 |
H23 |
1.080 |
1.081 |
C22 |
H22 |
1.080 |
1.080 |
C21 |
H21 |
1.080 |
1.080 |
Bond Angles for MJF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O18 |
C8 |
C2 |
120.0 |
120.0 |
O18 |
C8 |
C9 |
120.4 |
119.9 |
C2 |
C8 |
C9 |
119.5 |
120.0 |
C8 |
C2 |
C3 |
120.5 |
120.2 |
C8 |
C2 |
C1 |
119.6 |
120.2 |
C8 |
C9 |
C10 |
111.9 |
109.5 |
C8 |
C9 |
H91C |
108.8 |
109.5 |
C8 |
C9 |
H92C |
108.8 |
109.5 |
C3 |
C2 |
C1 |
119.9 |
119.7 |
C2 |
C3 |
C4 |
119.5 |
119.9 |
C2 |
C3 |
H3 |
120.3 |
120.1 |
C2 |
C1 |
C6 |
120.9 |
119.8 |
C2 |
C1 |
H1 |
119.5 |
120.1 |
C3 |
C4 |
C5 |
120.0 |
120.1 |
C4 |
C3 |
H3 |
120.2 |
120.0 |
C3 |
C4 |
H4 |
120.0 |
119.9 |
C4 |
C5 |
CL7 |
121.1 |
119.8 |
C4 |
C5 |
C6 |
120.6 |
120.4 |
C5 |
C4 |
H4 |
120.0 |
120.0 |
CL7 |
C5 |
C6 |
118.2 |
119.8 |
C5 |
C6 |
C1 |
119.1 |
120.1 |
C5 |
C6 |
H6 |
120.5 |
120.0 |
C6 |
C1 |
H1 |
119.6 |
120.1 |
C1 |
C6 |
H6 |
120.5 |
119.9 |
C9 |
C10 |
C11 |
109.6 |
109.5 |
C9 |
C10 |
C19 |
111.1 |
109.5 |
C10 |
C9 |
H91C |
108.9 |
109.5 |
C10 |
C9 |
H92C |
108.9 |
109.5 |
C9 |
C10 |
H10 |
108.2 |
109.4 |
C11 |
C10 |
C19 |
110.8 |
109.5 |
C10 |
C11 |
C15 |
112.1 |
109.5 |
C10 |
C11 |
C12 |
113.4 |
109.5 |
C11 |
C10 |
H10 |
108.2 |
109.5 |
C10 |
C11 |
H11 |
107.5 |
109.4 |
C10 |
C19 |
C24 |
121.1 |
120.0 |
C10 |
C19 |
C20 |
120.6 |
120.0 |
C19 |
C10 |
H10 |
108.8 |
109.5 |
C15 |
C11 |
C12 |
107.8 |
109.5 |
C11 |
C15 |
O17 |
117.8 |
120.0 |
C11 |
C15 |
O16 |
119.8 |
120.0 |
C15 |
C11 |
H11 |
107.9 |
109.5 |
C11 |
C12 |
O14 |
118.3 |
120.0 |
C11 |
C12 |
O13 |
118.2 |
120.0 |
C12 |
C11 |
H11 |
107.9 |
109.5 |
O17 |
C15 |
O16 |
122.4 |
120.0 |
C15 |
O17 |
H17 |
109.5 |
117.0 |
O14 |
C12 |
O13 |
123.5 |
120.0 |
C12 |
O14 |
H14 |
109.5 |
117.0 |
C24 |
C19 |
C20 |
118.2 |
120.0 |
C19 |
C24 |
C23 |
120.2 |
120.0 |
C19 |
C24 |
H24 |
119.9 |
120.0 |
C19 |
C20 |
C21 |
121.6 |
120.0 |
C19 |
C20 |
H20 |
119.2 |
120.0 |
C24 |
C23 |
C22 |
121.4 |
120.0 |
C23 |
C24 |
H24 |
119.9 |
120.0 |
C24 |
C23 |
H23 |
119.3 |
120.0 |
C23 |
C22 |
C21 |
118.2 |
120.0 |
C22 |
C23 |
H23 |
119.3 |
120.0 |
C23 |
C22 |
H22 |
120.9 |
120.0 |
C22 |
C21 |
C20 |
120.4 |
120.0 |
C21 |
C22 |
H22 |
120.9 |
120.0 |
C22 |
C21 |
H21 |
119.8 |
120.0 |
C21 |
C20 |
H20 |
119.2 |
120.0 |
C20 |
C21 |
H21 |
119.8 |
120.0 |
H91C |
C9 |
H92C |
109.5 |
109.4 |
Torsion Angles for MJF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C8 |
O18 |
C9 |
176.7 |
180.3 |
O18 |
C8 |
C2 |
C3 |
160.2 |
360.0 |
O18 |
C8 |
C2 |
C1 |
338.2 |
179.7 |
O18 |
C8 |
C9 |
C10 |
29.4 |
356.1 |
O18 |
C8 |
C9 |
H91C |
149.7 |
116.1 |
O18 |
C8 |
C9 |
H92C |
269.0 |
236.0 |
O18 |
C8 |
C2 |
C9 |
183.3 |
179.7 |
C2 |
C8 |
C9 |
C10 |
212.6 |
175.8 |
C2 |
C8 |
C9 |
H91C |
333.0 |
295.8 |
C2 |
C8 |
C9 |
H92C |
92.3 |
55.7 |
C3 |
C2 |
C8 |
C1 |
182.0 |
180.3 |
C8 |
C2 |
C3 |
C4 |
179.1 |
180.0 |
C8 |
C2 |
C3 |
H3 |
359.1 |
360.0 |
C8 |
C2 |
C1 |
C6 |
181.5 |
179.8 |
C8 |
C2 |
C1 |
H1 |
1.5 |
0.0 |
O18 |
C8 |
C9 |
C2 |
176.7 |
180.3 |
C9 |
C8 |
C2 |
C3 |
337.0 |
180.3 |
C9 |
C8 |
C2 |
C1 |
154.9 |
360.0 |
C8 |
C9 |
C10 |
C11 |
186.8 |
292.8 |
C8 |
C9 |
C10 |
C19 |
63.9 |
172.8 |
C10 |
C9 |
C8 |
H91C |
239.6 |
240.0 |
C10 |
C9 |
C8 |
H92C |
120.3 |
120.0 |
C8 |
C9 |
C10 |
H10 |
304.6 |
52.8 |
H91C |
C9 |
C8 |
H92C |
240.7 |
240.0 |
C3 |
C2 |
C8 |
C9 |
337.0 |
180.3 |
C8 |
C2 |
C3 |
C1 |
177.9 |
179.7 |
C3 |
C2 |
C1 |
C6 |
359.5 |
359.5 |
C3 |
C2 |
C1 |
H1 |
179.5 |
179.8 |
C2 |
C3 |
C4 |
C5 |
358.9 |
0.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
178.9 |
180.0 |
C1 |
C2 |
C8 |
C9 |
154.9 |
360.0 |
C8 |
C2 |
C1 |
C3 |
182.0 |
180.3 |
C1 |
C2 |
C3 |
C4 |
1.2 |
0.3 |
C1 |
C2 |
C3 |
H3 |
181.2 |
180.2 |
C5 |
C6 |
C1 |
C2 |
359.8 |
0.4 |
C6 |
C1 |
C2 |
H1 |
180.0 |
179.7 |
C2 |
C1 |
C6 |
H6 |
179.8 |
180.3 |
C4 |
C3 |
C2 |
C1 |
1.2 |
0.3 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
CL7 |
181.2 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.3 |
359.9 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H3 |
178.9 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
CL7 |
C5 |
C4 |
C6 |
180.9 |
180.1 |
C4 |
C5 |
C6 |
C1 |
0.3 |
359.8 |
C4 |
C5 |
C6 |
H6 |
180.3 |
180.0 |
C4 |
C5 |
CL7 |
C6 |
179.1 |
179.9 |
CL7 |
C5 |
C4 |
H4 |
1.2 |
0.0 |
CL7 |
C5 |
C6 |
C1 |
179.5 |
179.7 |
CL7 |
C5 |
C6 |
H6 |
359.4 |
359.9 |
C2 |
C1 |
C6 |
C5 |
359.8 |
0.4 |
C4 |
C5 |
C6 |
CL7 |
180.9 |
180.1 |
C6 |
C5 |
C4 |
H4 |
180.3 |
179.9 |
C5 |
C6 |
C1 |
H1 |
179.8 |
180.2 |
C1 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.3 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.1 |
C8 |
C9 |
C10 |
H91C |
120.3 |
120.0 |
C8 |
C9 |
C10 |
H92C |
239.7 |
240.0 |
C11 |
C10 |
C9 |
C19 |
122.8 |
120.0 |
C9 |
C10 |
C11 |
C15 |
72.0 |
186.3 |
C9 |
C10 |
C11 |
C12 |
194.3 |
306.3 |
C11 |
C10 |
C9 |
H10 |
242.2 |
240.0 |
C9 |
C10 |
C11 |
H11 |
313.6 |
66.3 |
C9 |
C10 |
C19 |
C24 |
258.9 |
240.0 |
C9 |
C10 |
C19 |
C20 |
81.0 |
59.7 |
C19 |
C10 |
C9 |
H10 |
119.4 |
120.0 |
H91C |
C9 |
C10 |
H92C |
119.3 |
120.0 |
C9 |
C10 |
C11 |
C19 |
237.0 |
240.0 |
C11 |
C10 |
C9 |
H91C |
66.4 |
172.8 |
C11 |
C10 |
C9 |
H92C |
307.1 |
52.8 |
C9 |
C10 |
C11 |
H10 |
117.8 |
120.0 |
C11 |
C10 |
C19 |
C24 |
136.7 |
120.0 |
C11 |
C10 |
C19 |
C20 |
318.8 |
299.7 |
C19 |
C10 |
C11 |
H10 |
240.8 |
240.0 |
C15 |
C11 |
C10 |
C12 |
237.7 |
240.0 |
C10 |
C11 |
C15 |
O17 |
191.7 |
264.3 |
C10 |
C11 |
C15 |
O16 |
12.5 |
84.3 |
C15 |
C11 |
C10 |
H11 |
118.5 |
120.0 |
C10 |
C11 |
C12 |
O14 |
320.9 |
81.4 |
C10 |
C11 |
C12 |
O13 |
142.9 |
261.4 |
C12 |
C11 |
C10 |
H11 |
240.8 |
240.0 |
C9 |
C10 |
C19 |
C11 |
122.1 |
120.0 |
C19 |
C10 |
C9 |
H91C |
303.6 |
52.8 |
C19 |
C10 |
C9 |
H92C |
184.3 |
292.8 |
C9 |
C10 |
C19 |
H10 |
241.0 |
240.0 |
C19 |
C10 |
C11 |
C15 |
195.1 |
306.3 |
C19 |
C10 |
C11 |
C12 |
317.4 |
66.3 |
C11 |
C10 |
C19 |
H10 |
118.8 |
120.0 |
C19 |
C10 |
C11 |
H11 |
76.6 |
186.4 |
C24 |
C19 |
C10 |
C20 |
177.9 |
180.3 |
C10 |
C19 |
C24 |
C23 |
179.6 |
180.0 |
C10 |
C19 |
C24 |
H24 |
359.6 |
359.9 |
C10 |
C19 |
C20 |
C21 |
179.8 |
179.8 |
C10 |
C19 |
C20 |
H20 |
359.8 |
360.0 |
C15 |
C11 |
C10 |
C19 |
195.1 |
306.3 |
C10 |
C11 |
C15 |
C12 |
125.5 |
120.0 |
C15 |
C11 |
C10 |
H10 |
314.2 |
66.3 |
C10 |
C11 |
C15 |
H11 |
241.8 |
240.0 |
C15 |
C11 |
C12 |
O14 |
85.6 |
201.4 |
C15 |
C11 |
C12 |
O13 |
267.6 |
21.4 |
C12 |
C11 |
C15 |
H11 |
116.3 |
120.0 |
O17 |
C15 |
C11 |
O16 |
179.1 |
180.0 |
C11 |
C15 |
O17 |
H17 |
180.9 |
185.1 |
C12 |
C11 |
C10 |
C19 |
317.4 |
66.3 |
C10 |
C11 |
C12 |
C15 |
235.3 |
240.0 |
C12 |
C11 |
C10 |
H10 |
76.6 |
186.4 |
C10 |
C11 |
C12 |
H11 |
118.9 |
120.0 |
C12 |
C11 |
C15 |
O17 |
66.2 |
144.3 |
C12 |
C11 |
C15 |
O16 |
247.1 |
324.3 |
C15 |
C11 |
C12 |
H11 |
243.7 |
240.0 |
O14 |
C12 |
C11 |
O13 |
178.0 |
180.0 |
C11 |
C12 |
O14 |
H14 |
182.1 |
179.9 |
O17 |
C15 |
C11 |
C12 |
66.2 |
144.3 |
C11 |
C15 |
O17 |
O16 |
180.9 |
180.0 |
O17 |
C15 |
C11 |
H11 |
309.8 |
24.3 |
O16 |
C15 |
C11 |
C12 |
247.1 |
324.3 |
C11 |
C15 |
O16 |
O17 |
179.1 |
180.0 |
O16 |
C15 |
C11 |
H11 |
130.7 |
204.3 |
O16 |
C15 |
O17 |
H17 |
0.0 |
5.0 |
C11 |
C12 |
O14 |
O13 |
182.1 |
180.0 |
O14 |
C12 |
C11 |
H11 |
201.9 |
321.4 |
C11 |
C12 |
O13 |
O14 |
177.9 |
180.0 |
O13 |
C12 |
C11 |
H11 |
23.9 |
141.4 |
O13 |
C12 |
O14 |
H14 |
360.0 |
359.9 |
C10 |
C19 |
C24 |
C20 |
182.0 |
179.7 |
C24 |
C19 |
C10 |
H10 |
17.9 |
360.0 |
C24 |
C19 |
C20 |
C21 |
1.8 |
359.5 |
C24 |
C19 |
C20 |
H20 |
181.8 |
179.7 |
C19 |
C24 |
C23 |
C22 |
2.1 |
359.9 |
C23 |
C24 |
C19 |
H24 |
180.0 |
180.1 |
C19 |
C24 |
C23 |
H23 |
182.2 |
179.9 |
C10 |
C19 |
C20 |
C24 |
178.0 |
180.3 |
C20 |
C19 |
C10 |
H10 |
200.0 |
179.7 |
C20 |
C19 |
C24 |
C23 |
357.6 |
0.3 |
C20 |
C19 |
C24 |
H24 |
177.6 |
180.2 |
C22 |
C21 |
C20 |
C19 |
359.2 |
0.4 |
C21 |
C20 |
C19 |
H20 |
180.0 |
179.8 |
C19 |
C20 |
C21 |
H21 |
179.2 |
180.3 |
C23 |
C24 |
C19 |
C20 |
357.6 |
0.3 |
C19 |
C24 |
C23 |
H24 |
180.0 |
179.9 |
C24 |
C23 |
C22 |
C21 |
358.9 |
0.0 |
C22 |
C23 |
C24 |
H23 |
180.0 |
180.0 |
C24 |
C23 |
C22 |
H22 |
178.9 |
179.9 |
C22 |
C23 |
C24 |
H24 |
182.2 |
180.0 |
C24 |
C23 |
C22 |
H23 |
180.0 |
180.0 |
C23 |
C22 |
C21 |
C20 |
0.4 |
359.8 |
C21 |
C22 |
C23 |
H22 |
180.0 |
180.1 |
C23 |
C22 |
C21 |
H21 |
180.4 |
180.0 |
C19 |
C20 |
C21 |
C22 |
359.2 |
0.4 |
C21 |
C22 |
C23 |
H23 |
178.9 |
180.0 |
C23 |
C22 |
C21 |
H22 |
180.0 |
179.9 |
C22 |
C21 |
C20 |
H20 |
179.2 |
180.2 |
C20 |
C21 |
C22 |
H21 |
180.0 |
179.8 |
C19 |
C20 |
C21 |
H20 |
180.0 |
180.2 |
C20 |
C21 |
C22 |
H22 |
180.5 |
179.9 |
C22 |
C21 |
C20 |
H21 |
180.0 |
180.2 |
C8 |
C9 |
H91C |
C10 |
237.8 |
240.0 |
C8 |
C9 |
H91C |
H92C |
118.9 |
120.0 |
H91C |
C9 |
C10 |
C11 |
66.4 |
172.8 |
H91C |
C9 |
C10 |
C19 |
303.6 |
52.8 |
C10 |
C9 |
H91C |
H92C |
241.1 |
240.0 |
H91C |
C9 |
C10 |
H10 |
184.2 |
292.8 |
C8 |
C9 |
H92C |
C10 |
122.2 |
120.0 |
C8 |
C9 |
H92C |
H91C |
241.1 |
240.0 |
H92C |
C9 |
C10 |
C11 |
307.1 |
52.8 |
H92C |
C9 |
C10 |
C19 |
184.3 |
292.8 |
C10 |
C9 |
H92C |
H91C |
118.9 |
120.0 |
H92C |
C9 |
C10 |
H10 |
64.9 |
172.8 |
H3 |
C3 |
C2 |
C1 |
181.2 |
180.2 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
178.9 |
180.0 |
H3 |
C3 |
C4 |
H4 |
358.9 |
0.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
179.7 |
H1 |
C1 |
C6 |
H6 |
359.8 |
0.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
358.9 |
0.0 |
H4 |
C4 |
C5 |
CL7 |
1.2 |
0.0 |
H4 |
C4 |
C5 |
C6 |
180.3 |
179.9 |
C5 |
C6 |
H6 |
C1 |
180.0 |
179.9 |
H6 |
C6 |
C1 |
H1 |
359.8 |
0.0 |
C9 |
C10 |
H10 |
C11 |
241.3 |
240.0 |
C9 |
C10 |
H10 |
C19 |
120.8 |
120.0 |
H10 |
C10 |
C9 |
H91C |
184.2 |
292.8 |
H10 |
C10 |
C9 |
H92C |
64.9 |
172.8 |
C11 |
C10 |
H10 |
C19 |
239.5 |
240.0 |
H10 |
C10 |
C11 |
C15 |
314.2 |
66.3 |
H10 |
C10 |
C11 |
C12 |
76.6 |
186.4 |
H10 |
C10 |
C11 |
H11 |
195.8 |
306.4 |
H10 |
C10 |
C19 |
C24 |
17.9 |
360.0 |
H10 |
C10 |
C19 |
C20 |
200.0 |
179.7 |
H11 |
C11 |
C10 |
C19 |
76.6 |
186.4 |
C10 |
C11 |
H11 |
C15 |
121.1 |
120.0 |
C10 |
C11 |
H11 |
C12 |
237.4 |
240.0 |
H11 |
C11 |
C10 |
H10 |
195.8 |
306.4 |
C15 |
C11 |
H11 |
C12 |
116.2 |
120.0 |
H11 |
C11 |
C15 |
O17 |
309.8 |
24.3 |
H11 |
C11 |
C15 |
O16 |
130.7 |
204.3 |
H11 |
C11 |
C12 |
O14 |
201.9 |
321.4 |
H11 |
C11 |
C12 |
O13 |
23.9 |
141.4 |
H17 |
O17 |
C15 |
O16 |
0.0 |
5.0 |
H14 |
O14 |
C12 |
O13 |
360.0 |
359.9 |
H24 |
C24 |
C19 |
C20 |
177.6 |
180.2 |
C19 |
C24 |
H24 |
C23 |
180.0 |
180.1 |
H24 |
C24 |
C23 |
C22 |
182.2 |
180.0 |
H24 |
C24 |
C23 |
H23 |
2.2 |
0.0 |
C19 |
C20 |
H20 |
C21 |
180.0 |
179.8 |
H20 |
C20 |
C21 |
H21 |
359.2 |
0.1 |
C24 |
C23 |
H23 |
C22 |
180.0 |
180.0 |
H23 |
C23 |
C24 |
H24 |
2.2 |
0.0 |
H23 |
C23 |
C22 |
C21 |
178.9 |
180.0 |
H23 |
C23 |
C22 |
H22 |
358.9 |
359.9 |
C23 |
C22 |
H22 |
C21 |
180.0 |
180.1 |
H22 |
C22 |
C23 |
H23 |
358.9 |
359.9 |
H22 |
C22 |
C21 |
C20 |
180.5 |
179.9 |
H22 |
C22 |
C21 |
H21 |
0.5 |
0.1 |
C22 |
C21 |
H21 |
C20 |
180.0 |
179.8 |
H21 |
C21 |
C22 |
H22 |
0.5 |
0.1 |
H21 |
C21 |
C20 |
H20 |
359.2 |
0.1 |