PDB Chemical Component MI1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MI1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.516 |
1.532 |
| C1 |
C6 |
1.572 |
1.530 |
| C1 |
N8 |
1.510 |
1.469 |
| C1 |
H1 |
1.100 |
1.089 |
| N3 |
C2 |
1.473 |
1.470 |
| C2 |
H2 |
1.100 |
1.089 |
| C2 |
H2A |
1.100 |
1.090 |
| N3 |
C4 |
1.486 |
1.470 |
| C4 |
C5 |
1.534 |
1.531 |
| C4 |
H4 |
1.100 |
1.089 |
| C4 |
H4A |
1.100 |
1.090 |
| C5 |
C6 |
1.545 |
1.530 |
| C5 |
H5 |
1.100 |
1.090 |
| C5 |
H5A |
1.100 |
1.090 |
| C7 |
C6 |
1.549 |
1.529 |
| C6 |
H6 |
1.100 |
1.091 |
| C20 |
N3 |
1.316 |
1.347 |
| O21 |
C20 |
1.226 |
1.213 |
| C22 |
C20 |
1.513 |
1.508 |
| C23 |
C22 |
1.472 |
1.472 |
| C22 |
H22 |
1.099 |
1.090 |
| C22 |
H22A |
1.100 |
1.090 |
| N24 |
C23 |
1.160 |
1.137 |
| C7 |
H7 |
1.100 |
1.091 |
| C7 |
H7A |
1.100 |
1.090 |
| C7 |
H7B |
1.100 |
1.090 |
| C9 |
N8 |
1.466 |
1.469 |
| N8 |
C10 |
1.381 |
1.384 |
| C9 |
H9 |
1.100 |
1.091 |
| C9 |
H9A |
1.100 |
1.090 |
| C9 |
H9B |
1.100 |
1.089 |
| C10 |
N19 |
1.377 |
1.329 |
| C10 |
C15 |
1.407 |
1.403 |
| C15 |
C16 |
1.455 |
1.461 |
| C15 |
C14 |
1.382 |
1.407 |
| C16 |
C11 |
1.381 |
1.343 |
| C16 |
H16 |
1.080 |
1.080 |
| C11 |
N12 |
1.377 |
1.371 |
| C11 |
H11 |
1.081 |
1.080 |
| C14 |
N12 |
1.346 |
1.368 |
| C14 |
N17 |
1.344 |
1.332 |
| C18 |
N17 |
1.360 |
1.316 |
| N19 |
C18 |
1.366 |
1.321 |
| C18 |
H18 |
1.080 |
1.080 |
| N12 |
HN12 |
1.000 |
0.970 |
Bond Angles for MI1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
104.9 |
109.3 |
| C2 |
C1 |
N8 |
112.4 |
109.5 |
| C2 |
C1 |
H1 |
110.2 |
109.6 |
| C6 |
C1 |
N8 |
108.4 |
109.5 |
| C6 |
C1 |
H1 |
114.1 |
109.5 |
| C1 |
C6 |
C5 |
112.8 |
109.5 |
| C1 |
C6 |
H6 |
99.1 |
109.5 |
| N8 |
C1 |
H1 |
106.8 |
109.5 |
| C1 |
N8 |
C10 |
122.8 |
111.0 |
| N3 |
C2 |
H2 |
110.8 |
109.5 |
| N3 |
C2 |
H2A |
111.6 |
109.7 |
| H2 |
C2 |
H2A |
106.5 |
109.6 |
| N3 |
C4 |
H4 |
110.7 |
109.6 |
| N3 |
C4 |
H4A |
111.5 |
109.7 |
| C5 |
C4 |
H4 |
110.7 |
109.6 |
| C5 |
C4 |
H4A |
111.5 |
109.6 |
| C4 |
C5 |
C6 |
113.1 |
109.3 |
| C4 |
C5 |
H5 |
108.3 |
109.5 |
| C4 |
C5 |
H5A |
107.5 |
109.5 |
| H4 |
C4 |
H4A |
106.7 |
109.6 |
| C6 |
C5 |
H5 |
108.3 |
109.5 |
| C6 |
C5 |
H5A |
107.5 |
109.5 |
| C5 |
C6 |
H6 |
112.8 |
109.5 |
| H5 |
C5 |
H5A |
112.4 |
109.5 |
| C7 |
C6 |
H6 |
105.6 |
109.4 |
| C23 |
C22 |
H22 |
109.8 |
109.5 |
| C23 |
C22 |
H22A |
110.1 |
109.5 |
| H22 |
C22 |
H22A |
108.6 |
109.5 |
| H7 |
C7 |
H7A |
109.5 |
109.5 |
| H7 |
C7 |
H7B |
109.4 |
109.5 |
| H7A |
C7 |
H7B |
109.5 |
109.5 |
| C9 |
N8 |
C10 |
114.6 |
111.0 |
| N8 |
C10 |
N19 |
119.2 |
120.8 |
| N8 |
C10 |
C15 |
122.6 |
120.8 |
| H9 |
C9 |
H9A |
109.4 |
109.4 |
| H9 |
C9 |
H9B |
109.5 |
109.4 |
| H9A |
C9 |
H9B |
109.5 |
109.5 |
| C15 |
C10 |
N19 |
118.2 |
118.3 |
| C10 |
N19 |
C18 |
119.4 |
121.1 |
| C10 |
C15 |
C16 |
133.6 |
135.1 |
| C10 |
C15 |
C14 |
117.8 |
118.6 |
| C16 |
C15 |
C14 |
108.6 |
106.2 |
| C15 |
C16 |
C11 |
103.6 |
106.8 |
| C15 |
C16 |
H16 |
128.2 |
126.6 |
| C15 |
C14 |
N12 |
108.0 |
107.1 |
| C15 |
C14 |
N17 |
125.1 |
118.6 |
| C11 |
C16 |
H16 |
128.2 |
126.5 |
| C16 |
C11 |
N12 |
110.4 |
109.8 |
| C16 |
C11 |
H11 |
124.8 |
125.1 |
| N12 |
C11 |
H11 |
124.8 |
125.1 |
| C11 |
N12 |
HN12 |
125.4 |
125.0 |
| C14 |
N12 |
HN12 |
125.3 |
125.0 |
| N19 |
C18 |
H18 |
117.7 |
118.6 |
Torsion Angles for MI1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
N8 |
242.4 |
240.1 |
| C6 |
C1 |
C2 |
H1 |
123.3 |
120.0 |
| C2 |
C1 |
C6 |
C5 |
301.1 |
298.6 |
| C2 |
C1 |
C6 |
H6 |
181.5 |
178.6 |
| N8 |
C1 |
C2 |
H1 |
240.9 |
239.9 |
| C2 |
C1 |
N8 |
C10 |
163.3 |
174.6 |
| C2 |
C1 |
C6 |
N8 |
120.3 |
119.9 |
| C2 |
C1 |
C6 |
H1 |
239.3 |
240.0 |
| N8 |
C1 |
C6 |
H1 |
118.9 |
120.1 |
| C6 |
C1 |
N8 |
C10 |
278.9 |
294.3 |
| C4 |
C5 |
C6 |
C1 |
51.9 |
61.4 |
| C1 |
C6 |
C5 |
H5 |
292.0 |
301.4 |
| C1 |
C6 |
C5 |
H5A |
170.4 |
181.4 |
| C5 |
C6 |
C1 |
H6 |
119.5 |
120.0 |
| C7 |
C6 |
C1 |
H6 |
246.4 |
240.0 |
| C2 |
C1 |
N8 |
C6 |
244.5 |
240.2 |
| C2 |
C1 |
N8 |
H1 |
121.1 |
120.1 |
| C6 |
C1 |
N8 |
H1 |
236.6 |
239.9 |
| N8 |
C1 |
C6 |
C5 |
180.7 |
178.7 |
| N8 |
C1 |
C6 |
H6 |
61.2 |
58.7 |
| C9 |
N8 |
C1 |
C10 |
179.5 |
236.1 |
| C1 |
N8 |
C10 |
N19 |
178.2 |
342.8 |
| C1 |
N8 |
C10 |
C15 |
0.2 |
163.0 |
| C2 |
C1 |
H1 |
C6 |
117.7 |
119.9 |
| C2 |
C1 |
H1 |
N8 |
237.5 |
239.9 |
| C6 |
C1 |
H1 |
N8 |
119.8 |
120.0 |
| H1 |
C1 |
C6 |
C5 |
61.8 |
58.6 |
| H1 |
C1 |
C6 |
H6 |
302.3 |
298.6 |
| H1 |
C1 |
N8 |
C10 |
42.3 |
54.4 |
| N3 |
C2 |
C1 |
N8 |
180.7 |
174.5 |
| N3 |
C2 |
C1 |
H1 |
299.8 |
294.6 |
| H2 |
C2 |
N3 |
H2A |
118.5 |
120.4 |
| H2 |
C2 |
C1 |
C6 |
183.0 |
174.4 |
| H2 |
C2 |
C1 |
N8 |
300.7 |
294.3 |
| H2 |
C2 |
C1 |
H1 |
59.8 |
54.4 |
| N3 |
C2 |
H2 |
H2A |
238.4 |
239.6 |
| H2A |
C2 |
C1 |
C6 |
301.6 |
294.8 |
| H2A |
C2 |
C1 |
N8 |
59.2 |
54.6 |
| H2A |
C2 |
C1 |
H1 |
178.3 |
174.8 |
| N3 |
C2 |
H2A |
H2 |
121.0 |
120.3 |
| C4 |
N3 |
C2 |
H2 |
170.2 |
186.6 |
| C4 |
N3 |
C2 |
H2A |
51.6 |
66.3 |
| C5 |
C4 |
N3 |
H4 |
240.0 |
119.8 |
| C5 |
C4 |
N3 |
H4A |
121.4 |
240.1 |
| N3 |
C4 |
C5 |
H5 |
73.6 |
65.4 |
| N3 |
C4 |
C5 |
H5A |
195.2 |
185.4 |
| H4 |
C4 |
N3 |
H4A |
241.4 |
120.3 |
| C1 |
C6 |
C5 |
C4 |
51.9 |
61.4 |
| N3 |
C4 |
C5 |
H4 |
120.0 |
240.2 |
| N3 |
C4 |
C5 |
H4A |
238.6 |
119.9 |
| H4 |
C4 |
C5 |
H4A |
118.6 |
239.7 |
| C6 |
C5 |
C4 |
H5 |
240.0 |
240.0 |
| C6 |
C5 |
C4 |
H5A |
118.4 |
120.0 |
| C4 |
C5 |
C6 |
H6 |
163.2 |
181.4 |
| H5 |
C5 |
C4 |
H5A |
238.4 |
240.0 |
| N3 |
C4 |
H4 |
H4A |
121.5 |
239.6 |
| C5 |
C4 |
H4 |
H4A |
238.6 |
120.3 |
| H4 |
C4 |
C5 |
C6 |
193.6 |
65.2 |
| H4 |
C4 |
C5 |
H5 |
313.6 |
185.2 |
| H4 |
C4 |
C5 |
H5A |
75.2 |
305.2 |
| N3 |
C4 |
H4A |
H4 |
239.0 |
120.3 |
| C5 |
C4 |
H4A |
H4 |
121.0 |
239.7 |
| H4A |
C4 |
C5 |
C6 |
75.0 |
185.5 |
| H4A |
C4 |
C5 |
H5 |
195.0 |
305.5 |
| H4A |
C4 |
C5 |
H5A |
316.6 |
65.5 |
| C5 |
C6 |
C1 |
N8 |
180.7 |
178.7 |
| C5 |
C6 |
C1 |
H1 |
61.8 |
58.6 |
| C1 |
C6 |
C5 |
H6 |
248.7 |
240.0 |
| C6 |
C5 |
C4 |
H4 |
193.6 |
65.2 |
| C6 |
C5 |
C4 |
H4A |
75.0 |
185.5 |
| C4 |
C5 |
C6 |
H5 |
120.0 |
120.0 |
| C4 |
C5 |
C6 |
H5A |
241.6 |
240.0 |
| H5 |
C5 |
C6 |
H5A |
121.6 |
120.0 |
| C7 |
C6 |
C5 |
H6 |
115.9 |
119.9 |
| H5 |
C5 |
C4 |
H4 |
313.6 |
185.2 |
| H5 |
C5 |
C4 |
H4A |
195.0 |
305.5 |
| C4 |
C5 |
H5 |
C6 |
237.1 |
240.1 |
| C4 |
C5 |
H5 |
H5A |
118.5 |
120.1 |
| C6 |
C5 |
H5 |
H5A |
241.5 |
239.9 |
| H5 |
C5 |
C6 |
H6 |
43.2 |
61.4 |
| H5A |
C5 |
C4 |
H4 |
75.2 |
305.2 |
| H5A |
C5 |
C4 |
H4A |
316.6 |
65.5 |
| C4 |
C5 |
H5A |
C6 |
122.0 |
119.9 |
| C4 |
C5 |
H5A |
H5 |
241.0 |
239.9 |
| C6 |
C5 |
H5A |
H5 |
119.0 |
120.1 |
| H5A |
C5 |
C6 |
H6 |
281.6 |
301.4 |
| C7 |
C6 |
C1 |
N8 |
307.6 |
298.7 |
| C7 |
C6 |
C1 |
H1 |
188.7 |
178.7 |
| C1 |
C6 |
C7 |
H6 |
110.0 |
120.0 |
| C7 |
C6 |
C5 |
H5 |
159.1 |
181.3 |
| C7 |
C6 |
C5 |
H5A |
37.5 |
61.3 |
| C5 |
C6 |
C7 |
H6 |
239.5 |
240.1 |
| H6 |
C6 |
C1 |
N8 |
61.2 |
58.7 |
| H6 |
C6 |
C1 |
H1 |
302.3 |
298.6 |
| C1 |
C6 |
H6 |
C5 |
119.5 |
120.1 |
| H6 |
C6 |
C5 |
H5 |
43.2 |
61.4 |
| H6 |
C6 |
C5 |
H5A |
281.6 |
301.4 |
| C20 |
N3 |
C2 |
H2 |
353.8 |
6.5 |
| C20 |
N3 |
C2 |
H2A |
235.3 |
246.2 |
| C20 |
N3 |
C4 |
H4 |
354.8 |
113.9 |
| C20 |
N3 |
C4 |
H4A |
113.4 |
353.5 |
| H22 |
C22 |
C23 |
H22A |
119.5 |
120.0 |
| C23 |
C22 |
H22 |
H22A |
239.5 |
240.0 |
| C23 |
C22 |
H22A |
H22 |
120.3 |
120.0 |
| N24 |
C23 |
C22 |
H22 |
53.0 |
242.3 |
| N24 |
C23 |
C22 |
H22A |
293.5 |
122.3 |
| H7 |
C7 |
C6 |
H6 |
174.2 |
303.9 |
| H7A |
C7 |
H7 |
H7B |
120.0 |
120.0 |
| H7A |
C7 |
C6 |
H6 |
294.2 |
63.9 |
| H7 |
C7 |
H7A |
H7B |
240.0 |
240.0 |
| H7B |
C7 |
C6 |
H6 |
54.2 |
184.0 |
| H7 |
C7 |
H7B |
H7A |
120.0 |
120.0 |
| C9 |
N8 |
C1 |
H1 |
221.8 |
290.5 |
| C1 |
N8 |
C9 |
C10 |
180.5 |
123.9 |
| C9 |
N8 |
C10 |
N19 |
358.6 |
106.7 |
| C9 |
N8 |
C10 |
C15 |
180.7 |
287.0 |
| C10 |
N8 |
C1 |
H1 |
42.3 |
54.4 |
| C15 |
C10 |
N8 |
N19 |
182.0 |
180.2 |
| N8 |
C10 |
N19 |
C18 |
182.6 |
179.7 |
| N8 |
C10 |
C15 |
C16 |
357.5 |
0.1 |
| N8 |
C10 |
C15 |
C14 |
178.2 |
180.0 |
| H9 |
C9 |
N8 |
C10 |
205.7 |
290.0 |
| H9A |
C9 |
H9 |
H9B |
120.0 |
119.9 |
| H9A |
C9 |
N8 |
C10 |
325.7 |
50.0 |
| H9 |
C9 |
H9A |
H9B |
240.0 |
240.1 |
| H9B |
C9 |
N8 |
C10 |
85.7 |
170.0 |
| H9 |
C9 |
H9B |
H9A |
120.0 |
119.9 |
| N8 |
C10 |
N19 |
C15 |
181.9 |
180.2 |
| N19 |
C10 |
C15 |
C16 |
179.5 |
180.2 |
| N19 |
C10 |
C15 |
C14 |
0.2 |
0.2 |
| C10 |
N19 |
C18 |
H18 |
178.8 |
180.3 |
| N8 |
C10 |
C15 |
N19 |
178.0 |
179.8 |
| C15 |
C10 |
N19 |
C18 |
0.6 |
359.5 |
| C16 |
C15 |
C10 |
C14 |
179.2 |
180.0 |
| C10 |
C15 |
C16 |
C11 |
180.1 |
180.0 |
| C10 |
C15 |
C16 |
H16 |
0.1 |
360.0 |
| C10 |
C15 |
C14 |
N12 |
179.3 |
180.0 |
| C10 |
C15 |
C14 |
N17 |
359.3 |
0.0 |
| C16 |
C15 |
C10 |
N19 |
179.5 |
180.2 |
| C10 |
C15 |
C16 |
C14 |
180.7 |
180.0 |
| C16 |
C15 |
C14 |
N12 |
359.9 |
360.0 |
| C16 |
C15 |
C14 |
N17 |
179.9 |
180.0 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
180.1 |
| C15 |
C16 |
C11 |
N12 |
1.1 |
360.0 |
| C15 |
C16 |
C11 |
H11 |
181.2 |
180.0 |
| C14 |
C15 |
C10 |
N19 |
0.2 |
0.2 |
| C10 |
C15 |
C14 |
C16 |
179.4 |
180.0 |
| C14 |
C15 |
C16 |
C11 |
359.4 |
0.0 |
| C14 |
C15 |
C16 |
H16 |
179.4 |
180.0 |
| C15 |
C14 |
N12 |
HN12 |
180.8 |
180.0 |
| C11 |
C16 |
C15 |
C14 |
359.4 |
0.0 |
| C15 |
C16 |
C11 |
H16 |
180.0 |
179.9 |
| N12 |
C11 |
C16 |
H11 |
180.0 |
179.9 |
| C16 |
C11 |
N12 |
HN12 |
178.8 |
180.0 |
| H16 |
C16 |
C15 |
C14 |
179.4 |
180.0 |
| C15 |
C16 |
H16 |
C11 |
180.0 |
180.1 |
| H16 |
C16 |
C11 |
N12 |
181.1 |
180.0 |
| H16 |
C16 |
C11 |
H11 |
1.1 |
0.1 |
| C15 |
C14 |
N12 |
C11 |
0.8 |
360.0 |
| N12 |
C11 |
C16 |
H16 |
181.1 |
180.0 |
| C16 |
C11 |
N12 |
H11 |
180.0 |
180.1 |
| C14 |
N12 |
C11 |
HN12 |
180.0 |
180.0 |
| H11 |
C11 |
C16 |
H16 |
1.1 |
0.1 |
| C16 |
C11 |
H11 |
N12 |
180.0 |
179.9 |
| H11 |
C11 |
N12 |
HN12 |
358.7 |
360.0 |
| C15 |
C14 |
N12 |
N17 |
180.0 |
180.0 |
| C14 |
N12 |
C11 |
H11 |
178.7 |
180.0 |
| C11 |
N12 |
C14 |
HN12 |
180.0 |
180.0 |
| C15 |
C14 |
N17 |
N12 |
180.0 |
180.0 |
| N17 |
C14 |
N12 |
HN12 |
0.8 |
360.0 |
| C10 |
N19 |
C18 |
N17 |
358.8 |
0.5 |
| HN12 |
N12 |
C11 |
H11 |
358.7 |
360.0 |