PDB Chemical Component MHG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MHG

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C75 C73 1.522 1.530
C76 C74 1.511 1.530
C73 C72 1.523 1.530
C73 C74 1.523 1.529
C71 C72 1.520 1.530
C71 N7 1.466 1.465
O6 C6 1.242 1.222
N7 C8 1.454 1.469
N7 C5 1.336 1.412
C6 C5 1.466 1.403
C6 N1 1.334 1.350
O2' C2' 1.410 1.429
C8 N9 1.457 1.468
C5 C4 1.456 1.385
N1 C2 1.340 1.360
N9 C4 1.319 1.386
N9 C1' 1.465 1.464
C4 N3 1.337 1.343
C2' C1' 1.513 1.545
C2' C3' 1.516 1.545
C2 N3 1.336 1.314
C2 N2 1.342 1.372
C1' O4' 1.406 1.444
N2 C21 1.450 1.465
O3' C3' 1.426 1.429
OP1 P 1.501 1.480
C3' C4' 1.525 1.545
O4' C4' 1.452 1.444
OP2 P 1.498 1.610
P O5' 1.587 1.610
C4' C5' 1.503 1.530
O5' C5' 1.419 1.429
C1' H1 1.100 1.090
C2' H2 1.100 1.090
C21 H3 1.100 1.091
C21 H4 1.100 1.091
C21 H5 1.100 1.090
C3' H6 1.100 1.090
C4' H7 1.100 1.090
C5' H8 1.100 1.090
C5' H9 1.100 1.089
C8 H10 1.100 1.090
N1 H11 1.000 0.970
N2 H12 1.000 0.971
O2' H13 0.950 0.967
O3' H14 0.950 0.967
OP2 H16 0.950 0.967
C71 H17 1.100 1.090
C71 H18 1.100 1.090
C72 H19 1.100 1.090
C72 H20 1.100 1.089
C73 H21 1.100 1.090
C74 H22 1.100 1.090
C74 H23 1.100 1.090
C75 H24 1.100 1.091
C75 H25 1.100 1.090
C75 H26 1.100 1.090
C76 H27 1.100 1.090
C76 H28 1.100 1.090
C76 H29 1.100 1.091
P OP3 1.600 1.610
OP3 H15 0.950 0.968
C8 H30 1.100 1.089

Bond Angles for MHG

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C75 C73 H21 108.4 109.4
C76 C74 H22 108.9 109.4
C76 C74 H23 108.9 109.4
C73 C72 H19 109.3 109.5
C73 C72 H20 109.3 109.5
C74 C73 H21 108.3 109.5
C73 C74 H22 108.9 109.5
C73 C74 H23 108.9 109.5
C72 C71 H17 107.8 109.4
C72 C71 H18 107.8 109.4
C71 C72 H19 109.3 109.4
C71 C72 H20 109.3 109.4
N7 C8 N9 95.9 105.6
N7 C8 H10 112.8 110.2
N7 C8 H30 112.7 110.3
C6 N1 H11 118.3 120.0
O2' C2' H2 111.2 110.6
N9 C8 H10 112.7 110.2
N9 C8 H30 112.8 110.3
C5 C4 N3 119.7 119.3
N1 C2 N3 123.0 121.5
N1 C2 N2 118.8 119.3
N9 C1' O4' 111.1 110.4
N9 C1' H1 107.7 110.3
C2 N3 C4 119.9 121.3
C2' C1' O4' 104.9 104.8
C2' C1' H1 107.1 110.4
C2' C3' C4' 101.5 104.1
C3' C2' H2 109.7 110.6
C2' C3' H6 112.1 110.5
N2 C2 N3 118.1 119.2
C2 N2 C21 120.7 120.0
C2 N2 H12 119.7 120.0
C1' O4' C4' 108.6 105.3
O4' C1' H1 108.5 110.3
N2 C21 H3 109.5 109.5
N2 C21 H4 109.5 109.5
N2 C21 H5 109.5 109.5
O3' C3' H6 113.6 110.5
OP1 P OP2 119.6 109.5
OP1 P OP3 107.8 109.4
C3' C4' C5' 114.9 110.4
C4' C3' H6 111.9 110.5
C3' C4' H7 108.8 110.3
O4' C4' H7 109.7 110.5
P OP2 H16 109.5 114.0
OP2 P OP3 108.1 109.5
C5' C4' H7 109.0 110.4
C4' C5' H8 109.0 109.5
C4' C5' H9 109.0 109.5
O5' C5' H8 109.0 109.5
O5' C5' H9 109.0 109.5
H3 C21 H4 109.5 109.4
H3 C21 H5 109.5 109.4
H4 C21 H5 109.5 109.5
H8 C5' H9 109.5 109.5
H10 C8 H30 109.4 110.2
H17 C71 H18 109.4 109.5
H19 C72 H20 109.5 109.5
H22 C74 H23 109.5 109.4
H24 C75 H25 109.5 109.5
H24 C75 H26 109.5 109.4
H25 C75 H26 109.4 109.5
H27 C76 H28 109.4 109.5
H27 C76 H29 109.5 109.5
H28 C76 H29 109.5 109.5
P OP3 H15 109.5 113.9

Torsion Angles for MHG

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C75 C73 C72 H19 267.8 305.0
C75 C73 C72 H20 27.7 185.0
C74 C73 C75 H21 119.2 120.0
C75 C73 C74 H22 173.9 55.0
C75 C73 C74 H23 54.5 175.0
C76 C74 C73 H21 53.5 55.0
C73 C74 C76 H22 239.7 120.1
C73 C74 C76 H23 120.3 240.0
H22 C74 C76 H23 240.6 119.9
C73 C72 C71 H17 284.5 60.0
C73 C72 C71 H18 42.5 300.0
C71 C72 C73 H19 240.0 120.0
C71 C72 C73 H20 120.1 240.0
H19 C72 C73 H20 240.1 120.0
C75 C73 C74 H21 240.8 240.0
C76 C74 C73 H22 120.3 240.0
C76 C74 C73 H23 239.7 120.0
C74 C73 C72 H19 31.2 65.0
C74 C73 C72 H20 151.1 305.0
H22 C74 C73 H23 119.4 240.0
C73 C72 C71 H19 120.1 240.0
C73 C72 C71 H20 239.9 120.0
H17 C71 C72 H18 242.0 120.0
H19 C72 C71 H20 119.9 240.0
C71 N7 C8 H10 298.2 299.0
C71 N7 C8 H30 62.8 60.9
O6 C6 N1 H11 0.3 0.4
N9 C8 N7 H10 242.3 241.0
N9 C8 N7 H30 117.7 119.1
H10 C8 N7 H30 235.4 238.1
C6 C5 C4 N3 1.0 359.5
C6 N1 C2 N3 0.9 0.1
C6 N1 C2 N2 180.8 180.3
O2' C2' C1' O4' 164.2 142.6
O2' C2' C1' H1 49.1 23.8
C3' C2' O2' H2 235.1 237.3
O2' C2' C3' H6 79.5 122.7
N7 C8 N9 H10 117.7 119.0
N7 C8 N9 H30 242.3 240.8
C8 N9 C1' O4' 107.8 233.5
C8 N9 C1' H1 226.5 355.7
H10 C8 N9 H30 124.6 121.9
C2 N3 C4 C5 359.4 0.0
N1 C2 N3 C4 359.7 0.2
N2 C2 N1 N3 180.0 180.2
N1 C2 N2 C21 163.8 179.8
N1 C2 N2 H12 343.8 359.8
C4 N9 C1' O4' 285.2 53.6
C4 N9 C1' H1 43.9 175.8
C2' C1' N9 O4' 239.5 244.5
C2' C1' N9 H1 120.8 122.3
N9 C1' O4' C4' 205.5 200.5
O4' C1' N9 H1 241.3 237.8
N2 C2 N3 C4 179.7 180.0
N9 C1' C2' O4' 123.7 118.9
N9 C1' C2' H1 238.9 237.7
C2' C1' O4' C4' 333.0 319.5
O4' C1' C2' H1 115.2 118.8
O2' C2' C3' H2 125.7 122.7
C3' C2' C1' O4' 43.0 24.0
C3' C2' C1' H1 287.8 265.2
O3' C3' C2' H6 233.7 237.4
C2' C3' C4' C5' 267.4 217.2
C4' C3' C2' H6 119.6 118.6
C2' C3' C4' H7 144.8 95.0
C5 C4 N3 C2 359.4 0.0
N1 C2 N3 N2 180.0 180.2
N3 C2 N2 C21 343.7 0.0
N3 C2 N2 H12 163.7 180.0
N1 C2 N2 N3 180.0 179.8
C2 N2 C21 H3 180.0 300.0
C2 N2 C21 H4 300.0 60.0
C2 N2 C21 H5 60.0 180.0
N9 C1' O4' H1 118.3 122.2
C2' C1' O4' H1 245.8 241.2
C1' O4' C4' H7 242.6 281.7
C21 N2 C2 N3 343.7 0.0
C2 N2 C21 H12 180.0 180.0
H3 C21 N2 H4 240.0 240.0
H3 C21 N2 H5 120.0 120.0
H4 C21 N2 H5 240.0 240.0
O3' C3' C2' H2 187.5 237.3
C2' C3' O3' H6 125.4 122.6
C4' C3' O3' H6 234.9 237.3
O3' C3' C4' H7 30.6 336.3
OP1 P OP2 H16 0.0 180.0
OP2 P OP1 OP3 236.1 120.0
OP1 P OP3 H15 360.0 60.0
C4' C3' C2' H2 73.4 118.6
C2' C3' C4' H6 240.3 241.4
C1' O4' C4' C3' 359.6 40.5
O3' C3' C4' H6 126.1 122.7
O4' C4' C3' H7 242.4 241.1
C5' C4' C3' H7 122.6 122.2
C3' C4' C5' H8 90.8 305.0
C3' C4' C5' H9 210.2 65.0
C4' O4' C1' H1 87.3 78.3
O4' C4' C3' H6 146.9 94.7
C3' C4' O4' H7 117.0 118.8
C5' C4' O4' H7 240.8 237.6
O4' C4' C5' H8 332.9 189.7
O4' C4' C5' H9 92.3 309.7
OP1 P OP2 OP3 123.8 240.0
OP2 P OP3 H15 130.6 300.0
P O5' C5' H8 5.5 60.1
P O5' C5' H9 246.1 300.0
C1' O4' C4' C5' 123.4 159.3
C5' C4' C3' H6 27.1 335.8
C3' C4' C5' H7 237.6 237.8
O4' C4' C5' H7 119.7 122.5
O5' C5' C4' H8 239.7 240.0
O5' C5' C4' H9 120.3 120.0
H8 C5' C4' H9 240.6 240.0
O5' C5' C4' H7 93.0 307.2
C4' C5' O5' H8 120.3 120.0
C4' C5' O5' H9 239.7 240.0
H8 C5' O5' H9 119.4 120.0
N9 C1' H1 O4' 239.6 237.8
C2' C1' H1 O4' 112.7 115.4
H1 C1' O4' C4' 87.3 78.3
H2 C2' C1' O4' 288.1 265.3
H2 C2' C1' H1 172.9 146.5
H2 C2' C3' C4' 73.4 118.6
H2 C2' C3' H6 313.7 360.0
N2 C21 H3 H4 120.0 120.0
N2 C21 H3 H5 240.0 240.0
H4 C21 H3 H5 120.0 120.0
N2 C21 H4 H3 240.0 240.0
N2 C21 H4 H5 120.0 120.0
H3 C21 H4 H5 240.0 240.1
N2 C21 H5 H3 120.0 120.0
N2 C21 H5 H4 240.0 240.0
H3 C21 H5 H4 120.0 119.9
C2' C3' H6 C4' 113.3 114.6
H6 C3' C2' H2 313.7 360.0
H6 C3' C4' C5' 27.1 335.8
H6 C3' C4' H7 264.5 213.6
C3' C4' H7 C5' 126.1 122.2
H7 C4' C3' H6 264.5 213.6
H7 C4' C5' H8 213.3 67.2
H7 C4' C5' H9 332.7 187.2
H8 C5' C4' H7 213.3 67.2
C4' C5' H8 H9 119.1 120.0
O5' C5' H8 H9 240.9 240.0
H9 C5' C4' H7 332.7 187.2
C4' C5' H9 H8 240.9 240.0
O5' C5' H9 H8 119.1 120.0
N7 C8 H10 N9 252.7 243.9
N7 C8 H10 H30 126.3 122.0
N9 C8 H10 H30 233.6 238.1
H11 N1 C2 N3 180.8 180.0
H11 N1 C2 N2 0.8 0.2
H12 N2 C2 N3 163.7 180.0
C2 N2 H12 C21 180.0 180.0
H12 N2 C21 H3 360.0 120.0
H12 N2 C21 H4 120.0 240.0
H12 N2 C21 H5 240.0 0.0
H13 O2' C2' H2 57.0 57.4
H14 O3' C3' H6 54.6 298.8
H16 OP2 P OP3 236.2 300.0
C72 C71 H17 H18 117.0 240.1
H17 C71 C72 H19 164.4 180.0
H17 C71 C72 H20 44.5 300.0
C72 C71 H18 H17 243.0 119.9
H18 C71 C72 H19 282.5 60.0
H18 C71 C72 H20 162.6 180.0
C73 C72 H19 H20 119.8 240.0
H19 C72 C71 H17 164.4 180.0
H19 C72 C71 H18 282.5 60.0
C71 C72 H19 H20 240.2 119.9
C73 C72 H20 H19 240.2 120.0
H20 C72 C71 H17 44.5 300.0
H20 C72 C71 H18 162.6 180.0
C71 C72 H20 H19 119.8 240.1
H21 C73 C72 H19 148.7 185.0
H21 C73 C72 H20 268.6 65.0
H21 C73 C74 H22 293.1 175.0
H21 C73 C74 H23 173.8 295.0
C76 C74 H22 H23 119.0 240.1
H22 C74 C73 H21 293.1 175.0
C73 C74 H22 H23 241.0 120.0
C76 C74 H23 H22 241.0 119.9
H23 C74 C73 H21 173.8 295.0
C73 C74 H23 H22 119.0 240.0
H24 C75 C73 H21 299.1 60.0
H25 C75 H24 H26 120.0 120.0
H25 C75 C73 H21 59.1 180.0
H24 C75 H25 H26 240.0 240.0
H26 C75 C73 H21 179.0 300.0
H24 C75 H26 H25 120.0 120.0
H27 C76 C74 H22 300.3 179.9
H27 C76 C74 H23 59.7 60.0
H28 C76 H27 H29 120.0 120.0
H28 C76 C74 H22 60.3 299.9
H28 C76 C74 H23 179.7 180.0
H27 C76 H28 H29 240.0 240.0
H29 C76 C74 H22 180.3 59.9
H29 C76 C74 H23 299.7 300.0
H27 C76 H29 H28 120.0 120.0
OP1 P OP3 OP2 229.3 120.0
OP3 P OP2 H16 236.2 300.0
N7 C8 H30 N9 107.3 116.2
N7 C8 H30 H10 233.7 238.1
N9 C8 H30 H10 126.4 121.9