PDB Chemical Component MH5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MH5
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C4 |
C3 |
1.420 |
1.384 |
C4 |
C5 |
1.372 |
1.333 |
C3 |
C2 |
1.357 |
1.334 |
C5 |
C6 |
1.509 |
1.508 |
C5 |
S1 |
1.727 |
1.758 |
C6 |
N1 |
1.449 |
1.465 |
N1 |
C7 |
1.398 |
1.397 |
C2 |
C1 |
1.498 |
1.507 |
C2 |
S1 |
1.741 |
1.758 |
C8 |
C7 |
1.397 |
1.390 |
C8 |
C9 |
1.383 |
1.383 |
C7 |
C12 |
1.405 |
1.388 |
C9 |
C10 |
1.400 |
1.379 |
C12 |
C11 |
1.396 |
1.395 |
C10 |
C11 |
1.389 |
1.397 |
C11 |
C13 |
1.509 |
1.477 |
C13 |
O1 |
1.266 |
1.215 |
C13 |
O2 |
1.261 |
1.347 |
N1 |
H1 |
1.001 |
0.970 |
C4 |
H2 |
1.080 |
1.081 |
C6 |
H5 |
1.100 |
1.089 |
C6 |
H6 |
1.100 |
1.090 |
C8 |
H7 |
1.080 |
1.080 |
C10 |
H8 |
1.080 |
1.080 |
C1 |
H9 |
1.100 |
1.090 |
C1 |
H10 |
1.100 |
1.090 |
C1 |
H11 |
1.100 |
1.090 |
C3 |
H13 |
1.080 |
1.080 |
C9 |
H15 |
1.080 |
1.080 |
C12 |
H16 |
1.080 |
1.079 |
O2 |
H17 |
0.950 |
0.967 |
Bond Angles for MH5
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C5 |
C4 |
C3 |
112.6 |
114.9 |
C4 |
C3 |
C2 |
113.4 |
114.9 |
C3 |
C4 |
H2 |
123.7 |
122.5 |
C4 |
C3 |
H13 |
123.3 |
122.6 |
C4 |
C5 |
C6 |
128.6 |
125.2 |
C4 |
C5 |
S1 |
110.5 |
109.6 |
C5 |
C4 |
H2 |
123.7 |
122.5 |
C3 |
C2 |
S1 |
109.9 |
109.6 |
C6 |
C5 |
S1 |
120.9 |
125.2 |
C5 |
C6 |
H5 |
109.4 |
109.5 |
C5 |
C6 |
H6 |
109.3 |
109.4 |
C5 |
S1 |
C2 |
92.2 |
91.0 |
C6 |
N1 |
C7 |
127.1 |
120.0 |
C6 |
N1 |
H1 |
104.9 |
120.0 |
N1 |
C7 |
C12 |
121.9 |
120.0 |
C7 |
N1 |
H1 |
104.9 |
120.0 |
C2 |
C1 |
H9 |
109.5 |
109.5 |
C2 |
C1 |
H10 |
109.5 |
109.5 |
C2 |
C1 |
H11 |
109.4 |
109.5 |
C8 |
C7 |
C12 |
120.5 |
120.0 |
C8 |
C9 |
C10 |
120.8 |
120.2 |
C9 |
C8 |
H7 |
120.5 |
119.9 |
C8 |
C9 |
H15 |
119.6 |
119.9 |
C7 |
C12 |
C11 |
120.0 |
119.8 |
C7 |
C12 |
H16 |
120.0 |
120.1 |
C9 |
C10 |
C11 |
120.5 |
120.0 |
C9 |
C10 |
H8 |
119.7 |
120.0 |
C10 |
C11 |
C13 |
118.7 |
120.1 |
C11 |
C10 |
H8 |
119.7 |
119.9 |
C11 |
C13 |
O1 |
119.5 |
120.0 |
C11 |
C13 |
O2 |
116.2 |
120.1 |
O1 |
C13 |
O2 |
124.3 |
119.9 |
C13 |
O2 |
H17 |
109.5 |
117.1 |
H5 |
C6 |
H6 |
109.5 |
109.5 |
H9 |
C1 |
H10 |
109.5 |
109.5 |
H9 |
C1 |
H11 |
109.5 |
109.4 |
H10 |
C1 |
H11 |
109.5 |
109.5 |
Torsion Angles for MH5
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C4 |
C5 |
C6 |
187.6 |
180.1 |
C3 |
C4 |
C5 |
S1 |
5.5 |
360.0 |
C5 |
C4 |
C3 |
H2 |
180.0 |
179.8 |
C4 |
C3 |
C2 |
S1 |
12.4 |
0.1 |
C5 |
C4 |
C3 |
C2 |
348.2 |
360.0 |
C3 |
C4 |
C5 |
H2 |
180.0 |
180.2 |
C5 |
C4 |
C3 |
H13 |
168.2 |
180.1 |
C6 |
C5 |
C4 |
S1 |
182.2 |
180.1 |
C4 |
C5 |
C6 |
H5 |
37.0 |
329.9 |
C4 |
C5 |
C6 |
H6 |
156.8 |
209.9 |
C4 |
C5 |
S1 |
C2 |
1.2 |
0.1 |
C2 |
C3 |
C4 |
H2 |
168.2 |
180.2 |
C4 |
C3 |
C2 |
H13 |
180.0 |
180.1 |
C5 |
S1 |
C2 |
C3 |
352.2 |
359.9 |
C3 |
C2 |
C1 |
H9 |
178.2 |
180.1 |
C3 |
C2 |
C1 |
H10 |
298.2 |
300.1 |
C3 |
C2 |
C1 |
H11 |
58.1 |
60.1 |
C6 |
C5 |
C4 |
C3 |
187.6 |
180.1 |
C4 |
C5 |
C6 |
S1 |
177.6 |
179.9 |
C6 |
C5 |
C4 |
H2 |
7.6 |
359.8 |
C6 |
C5 |
S1 |
C2 |
179.3 |
179.9 |
C5 |
C6 |
N1 |
C7 |
282.9 |
180.0 |
C5 |
C6 |
N1 |
H1 |
45.2 |
359.7 |
H5 |
C6 |
C5 |
H6 |
240.2 |
120.0 |
S1 |
C5 |
C4 |
C3 |
5.5 |
360.0 |
C4 |
C5 |
S1 |
C6 |
182.0 |
180.1 |
S1 |
C5 |
C4 |
H2 |
185.5 |
179.7 |
C3 |
C2 |
S1 |
C5 |
352.2 |
359.9 |
S1 |
C5 |
C6 |
H5 |
219.3 |
150.1 |
S1 |
C5 |
C6 |
H6 |
339.2 |
30.0 |
C6 |
N1 |
C7 |
C12 |
357.7 |
179.7 |
C7 |
N1 |
C6 |
H1 |
237.7 |
180.3 |
C6 |
N1 |
C7 |
H1 |
122.3 |
179.7 |
C8 |
C7 |
N1 |
C12 |
179.9 |
180.2 |
N1 |
C7 |
C12 |
C11 |
180.1 |
180.0 |
N1 |
C7 |
C12 |
H16 |
0.1 |
0.0 |
C4 |
C3 |
C2 |
C1 |
194.0 |
179.9 |
C5 |
S1 |
C2 |
C1 |
170.7 |
180.0 |
H9 |
C1 |
C2 |
H10 |
240.0 |
240.0 |
H9 |
C1 |
C2 |
H11 |
120.0 |
119.9 |
H10 |
C1 |
C2 |
H11 |
240.0 |
240.0 |
S1 |
C2 |
C1 |
H9 |
0.0 |
359.9 |
S1 |
C2 |
C1 |
H10 |
120.0 |
120.0 |
S1 |
C2 |
C1 |
H11 |
240.0 |
240.0 |
N1 |
C7 |
C8 |
C12 |
180.1 |
179.8 |
C8 |
C7 |
N1 |
H1 |
55.3 |
180.2 |
C8 |
C7 |
C12 |
C11 |
0.2 |
359.7 |
C8 |
C7 |
C12 |
H16 |
180.2 |
179.8 |
C9 |
C8 |
C7 |
C12 |
1.5 |
0.2 |
C8 |
C9 |
C10 |
C11 |
0.5 |
359.7 |
C8 |
C9 |
C10 |
H8 |
180.5 |
180.0 |
C12 |
C7 |
N1 |
H1 |
235.4 |
0.0 |
C10 |
C9 |
C8 |
H7 |
178.1 |
180.0 |
C8 |
C9 |
C10 |
H15 |
180.0 |
179.9 |
C9 |
C10 |
C11 |
C13 |
178.8 |
180.4 |
C11 |
C10 |
C9 |
H8 |
180.0 |
179.7 |
C7 |
C12 |
C11 |
H16 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
H8 |
181.2 |
179.9 |
C12 |
C11 |
C13 |
O1 |
352.7 |
0.1 |
C12 |
C11 |
C13 |
O2 |
170.6 |
180.0 |
C7 |
C12 |
C11 |
C10 |
358.5 |
0.0 |
C9 |
C10 |
C11 |
H8 |
180.0 |
180.3 |
C10 |
C11 |
C13 |
O1 |
175.1 |
180.0 |
C10 |
C11 |
C13 |
O2 |
353.0 |
359.9 |
C7 |
C12 |
C11 |
C13 |
180.9 |
179.9 |
C13 |
C11 |
C10 |
H8 |
358.9 |
0.0 |
O1 |
C13 |
C11 |
O2 |
182.1 |
180.0 |
C11 |
C13 |
O2 |
H17 |
182.2 |
180.0 |
C11 |
C13 |
O1 |
O2 |
177.7 |
180.0 |
O1 |
C13 |
O2 |
H17 |
360.0 |
359.9 |
C11 |
C13 |
O2 |
O1 |
182.2 |
180.0 |
C6 |
N1 |
H1 |
C7 |
224.3 |
180.3 |
H1 |
N1 |
C7 |
C12 |
235.4 |
0.0 |
C5 |
C4 |
H2 |
C3 |
180.0 |
180.3 |
H2 |
C4 |
C3 |
C2 |
168.2 |
180.2 |
H2 |
C4 |
C3 |
H13 |
348.2 |
0.3 |
H2 |
C4 |
C5 |
C6 |
7.6 |
359.8 |
H2 |
C4 |
C5 |
S1 |
185.5 |
179.7 |
H5 |
C6 |
C5 |
S1 |
219.3 |
150.1 |
C5 |
C6 |
H5 |
H6 |
119.8 |
240.0 |
H5 |
C6 |
N1 |
C7 |
162.8 |
300.0 |
H5 |
C6 |
N1 |
H1 |
285.1 |
119.7 |
H6 |
C6 |
C5 |
S1 |
339.2 |
30.0 |
C5 |
C6 |
H6 |
H5 |
240.2 |
120.0 |
H6 |
C6 |
N1 |
C7 |
42.9 |
60.1 |
H6 |
C6 |
N1 |
H1 |
165.2 |
239.8 |
H7 |
C8 |
C7 |
C12 |
181.5 |
180.3 |
H7 |
C8 |
C9 |
C10 |
178.1 |
180.0 |
H7 |
C8 |
C9 |
H15 |
358.2 |
360.0 |
C9 |
C10 |
H8 |
C11 |
180.0 |
179.7 |
H8 |
C10 |
C11 |
C13 |
358.9 |
0.0 |
C2 |
C1 |
H9 |
H10 |
120.0 |
120.0 |
C2 |
C1 |
H9 |
H11 |
240.0 |
240.0 |
H10 |
C1 |
H9 |
H11 |
120.0 |
120.0 |
C2 |
C1 |
H10 |
H9 |
240.0 |
240.0 |
C2 |
C1 |
H10 |
H11 |
120.0 |
120.0 |
H9 |
C1 |
H10 |
H11 |
240.0 |
240.0 |
C2 |
C1 |
H11 |
H9 |
120.0 |
120.0 |
C2 |
C1 |
H11 |
H10 |
240.0 |
239.9 |
H9 |
C1 |
H11 |
H10 |
120.0 |
120.0 |
C4 |
C3 |
H13 |
C2 |
180.0 |
179.9 |
H13 |
C3 |
C4 |
H2 |
348.2 |
0.3 |
H13 |
C3 |
C2 |
S1 |
192.3 |
180.0 |
C8 |
C9 |
H15 |
C10 |
180.0 |
180.1 |
H15 |
C9 |
C8 |
H7 |
358.2 |
360.0 |
H15 |
C9 |
C10 |
C11 |
180.5 |
179.8 |
H15 |
C9 |
C10 |
H8 |
0.5 |
0.1 |
C7 |
C12 |
H16 |
C11 |
180.0 |
180.0 |