PDB Chemical Component MH5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MH5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C3 1.420 1.384
C4 C5 1.372 1.333
C3 C2 1.357 1.334
C5 C6 1.509 1.508
C5 S1 1.727 1.758
C6 N1 1.449 1.465
N1 C7 1.398 1.397
C2 C1 1.498 1.507
C2 S1 1.741 1.758
C8 C7 1.397 1.390
C8 C9 1.383 1.383
C7 C12 1.405 1.388
C9 C10 1.400 1.379
C12 C11 1.396 1.395
C10 C11 1.389 1.397
C11 C13 1.509 1.477
C13 O1 1.266 1.215
C13 O2 1.261 1.347
N1 H1 1.001 0.970
C4 H2 1.080 1.081
C6 H5 1.100 1.089
C6 H6 1.100 1.090
C8 H7 1.080 1.080
C10 H8 1.080 1.080
C1 H9 1.100 1.090
C1 H10 1.100 1.090
C1 H11 1.100 1.090
C3 H13 1.080 1.080
C9 H15 1.080 1.080
C12 H16 1.080 1.079
O2 H17 0.950 0.967

Bond Angles for MH5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 C4 C3 112.6 114.9
C4 C3 C2 113.4 114.9
C3 C4 H2 123.7 122.5
C4 C3 H13 123.3 122.6
C4 C5 C6 128.6 125.2
C4 C5 S1 110.5 109.6
C5 C4 H2 123.7 122.5
C3 C2 S1 109.9 109.6
C6 C5 S1 120.9 125.2
C5 C6 H5 109.4 109.5
C5 C6 H6 109.3 109.4
C5 S1 C2 92.2 91.0
C6 N1 C7 127.1 120.0
C6 N1 H1 104.9 120.0
N1 C7 C12 121.9 120.0
C7 N1 H1 104.9 120.0
C2 C1 H9 109.5 109.5
C2 C1 H10 109.5 109.5
C2 C1 H11 109.4 109.5
C8 C7 C12 120.5 120.0
C8 C9 C10 120.8 120.2
C9 C8 H7 120.5 119.9
C8 C9 H15 119.6 119.9
C7 C12 C11 120.0 119.8
C7 C12 H16 120.0 120.1
C9 C10 C11 120.5 120.0
C9 C10 H8 119.7 120.0
C10 C11 C13 118.7 120.1
C11 C10 H8 119.7 119.9
C11 C13 O1 119.5 120.0
C11 C13 O2 116.2 120.1
O1 C13 O2 124.3 119.9
C13 O2 H17 109.5 117.1
H5 C6 H6 109.5 109.5
H9 C1 H10 109.5 109.5
H9 C1 H11 109.5 109.4
H10 C1 H11 109.5 109.5

Torsion Angles for MH5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C4 C5 C6 187.6 180.1
C3 C4 C5 S1 5.5 360.0
C5 C4 C3 H2 180.0 179.8
C4 C3 C2 S1 12.4 0.1
C5 C4 C3 C2 348.2 360.0
C3 C4 C5 H2 180.0 180.2
C5 C4 C3 H13 168.2 180.1
C6 C5 C4 S1 182.2 180.1
C4 C5 C6 H5 37.0 329.9
C4 C5 C6 H6 156.8 209.9
C4 C5 S1 C2 1.2 0.1
C2 C3 C4 H2 168.2 180.2
C4 C3 C2 H13 180.0 180.1
C5 S1 C2 C3 352.2 359.9
C3 C2 C1 H9 178.2 180.1
C3 C2 C1 H10 298.2 300.1
C3 C2 C1 H11 58.1 60.1
C6 C5 C4 C3 187.6 180.1
C4 C5 C6 S1 177.6 179.9
C6 C5 C4 H2 7.6 359.8
C6 C5 S1 C2 179.3 179.9
C5 C6 N1 C7 282.9 180.0
C5 C6 N1 H1 45.2 359.7
H5 C6 C5 H6 240.2 120.0
S1 C5 C4 C3 5.5 360.0
C4 C5 S1 C6 182.0 180.1
S1 C5 C4 H2 185.5 179.7
C3 C2 S1 C5 352.2 359.9
S1 C5 C6 H5 219.3 150.1
S1 C5 C6 H6 339.2 30.0
C6 N1 C7 C12 357.7 179.7
C7 N1 C6 H1 237.7 180.3
C6 N1 C7 H1 122.3 179.7
C8 C7 N1 C12 179.9 180.2
N1 C7 C12 C11 180.1 180.0
N1 C7 C12 H16 0.1 0.0
C4 C3 C2 C1 194.0 179.9
C5 S1 C2 C1 170.7 180.0
H9 C1 C2 H10 240.0 240.0
H9 C1 C2 H11 120.0 119.9
H10 C1 C2 H11 240.0 240.0
S1 C2 C1 H9 0.0 359.9
S1 C2 C1 H10 120.0 120.0
S1 C2 C1 H11 240.0 240.0
N1 C7 C8 C12 180.1 179.8
C8 C7 N1 H1 55.3 180.2
C8 C7 C12 C11 0.2 359.7
C8 C7 C12 H16 180.2 179.8
C9 C8 C7 C12 1.5 0.2
C8 C9 C10 C11 0.5 359.7
C8 C9 C10 H8 180.5 180.0
C12 C7 N1 H1 235.4 0.0
C10 C9 C8 H7 178.1 180.0
C8 C9 C10 H15 180.0 179.9
C9 C10 C11 C13 178.8 180.4
C11 C10 C9 H8 180.0 179.7
C7 C12 C11 H16 180.0 180.0
C12 C11 C10 H8 181.2 179.9
C12 C11 C13 O1 352.7 0.1
C12 C11 C13 O2 170.6 180.0
C7 C12 C11 C10 358.5 0.0
C9 C10 C11 H8 180.0 180.3
C10 C11 C13 O1 175.1 180.0
C10 C11 C13 O2 353.0 359.9
C7 C12 C11 C13 180.9 179.9
C13 C11 C10 H8 358.9 0.0
O1 C13 C11 O2 182.1 180.0
C11 C13 O2 H17 182.2 180.0
C11 C13 O1 O2 177.7 180.0
O1 C13 O2 H17 360.0 359.9
C11 C13 O2 O1 182.2 180.0
C6 N1 H1 C7 224.3 180.3
H1 N1 C7 C12 235.4 0.0
C5 C4 H2 C3 180.0 180.3
H2 C4 C3 C2 168.2 180.2
H2 C4 C3 H13 348.2 0.3
H2 C4 C5 C6 7.6 359.8
H2 C4 C5 S1 185.5 179.7
H5 C6 C5 S1 219.3 150.1
C5 C6 H5 H6 119.8 240.0
H5 C6 N1 C7 162.8 300.0
H5 C6 N1 H1 285.1 119.7
H6 C6 C5 S1 339.2 30.0
C5 C6 H6 H5 240.2 120.0
H6 C6 N1 C7 42.9 60.1
H6 C6 N1 H1 165.2 239.8
H7 C8 C7 C12 181.5 180.3
H7 C8 C9 C10 178.1 180.0
H7 C8 C9 H15 358.2 360.0
C9 C10 H8 C11 180.0 179.7
H8 C10 C11 C13 358.9 0.0
C2 C1 H9 H10 120.0 120.0
C2 C1 H9 H11 240.0 240.0
H10 C1 H9 H11 120.0 120.0
C2 C1 H10 H9 240.0 240.0
C2 C1 H10 H11 120.0 120.0
H9 C1 H10 H11 240.0 240.0
C2 C1 H11 H9 120.0 120.0
C2 C1 H11 H10 240.0 239.9
H9 C1 H11 H10 120.0 120.0
C4 C3 H13 C2 180.0 179.9
H13 C3 C4 H2 348.2 0.3
H13 C3 C2 S1 192.3 180.0
C8 C9 H15 C10 180.0 180.1
H15 C9 C8 H7 358.2 360.0
H15 C9 C10 C11 180.5 179.8
H15 C9 C10 H8 0.5 0.1
C7 C12 H16 C11 180.0 180.0