PDB Chemical Component MGL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MGL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.530 1.530
C1 O1 1.390 1.428
C1 O5 1.433 1.425
C1 H1 1.062 1.090
C2 C3 1.538 1.532
C2 O2 1.426 1.428
C2 H2 1.100 1.089
C3 C4 1.551 1.532
C3 O3 1.429 1.428
C3 H3 1.096 1.091
C4 C5 1.545 1.530
C4 O4 1.443 1.429
C4 H4 1.099 1.090
C5 C6 1.525 1.529
C5 O5 1.440 1.425
C5 H5 1.100 1.090
C6 O6 1.426 1.428
C6 H61 1.101 1.090
C6 H62 1.098 1.090
C7 O1 1.449 1.429
C7 H71 1.101 1.090
C7 H72 1.096 1.090
C7 H73 1.098 1.088
O2 HO2 0.958 0.967
O3 HO3 0.961 0.967
O4 HO4 0.950 0.967
O6 HO6 0.957 0.967

Bond Angles for MGL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 111.4 109.4
C2 C1 O5 110.3 109.8
C2 C1 H1 110.1 109.4
C1 C2 C3 108.9 109.0
C1 C2 O2 109.3 109.6
C1 C2 H2 109.0 109.5
O1 C1 O5 108.7 109.5
O1 C1 H1 106.5 109.4
C1 O1 C7 116.1 106.8
O5 C1 H1 109.7 109.4
C1 O5 C5 111.2 107.7
C3 C2 O2 109.8 109.6
C3 C2 H2 110.1 109.6
C2 C3 C4 112.2 108.7
C2 C3 O3 110.3 109.8
C2 C3 H3 108.0 109.7
O2 C2 H2 109.7 109.6
C2 O2 HO2 108.9 106.9
C4 C3 O3 109.9 109.6
C4 C3 H3 108.7 109.5
C3 C4 C5 112.2 109.1
C3 C4 O4 108.3 109.7
C3 C4 H4 107.6 109.5
O3 C3 H3 107.6 109.5
C3 O3 HO3 109.2 106.9
C5 C4 O4 108.0 109.6
C5 C4 H4 108.0 109.5
C4 C5 C6 114.2 109.4
C4 C5 O5 110.4 109.8
C4 C5 H5 110.1 109.4
O4 C4 H4 112.9 109.5
C4 O4 HO4 108.3 106.9
C6 C5 O5 107.3 109.4
C6 C5 H5 106.8 109.4
C5 C6 O6 111.5 109.5
C5 C6 H61 110.0 109.5
C5 C6 H62 109.8 109.4
O5 C5 H5 107.7 109.4
O6 C6 H61 108.7 109.5
O6 C6 H62 109.7 109.5
C6 O6 HO6 109.4 106.8
H61 C6 H62 107.0 109.4
O1 C7 H71 111.6 109.5
O1 C7 H72 112.0 109.4
O1 C7 H73 109.7 109.5
H71 C7 H72 108.5 109.4
H71 C7 H73 107.3 109.5
H72 C7 H73 107.6 109.5

Torsion Angles for MGL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 120.8 120.2
O1 C1 C2 H1 242.1 240.2
C2 C1 O1 C7 171.2 179.9
O5 C1 C2 H1 121.3 120.0
C2 C1 O5 C5 292.2 292.4
C3 C2 C1 O2 240.1 240.1
C3 C2 C1 H2 120.1 119.9
C1 C2 C3 C4 311.1 306.3
C1 C2 C3 O3 188.2 186.4
C1 C2 C3 H3 70.8 66.0
O2 C2 C1 H2 240.0 239.8
C1 C2 O2 HO2 174.3 60.4
C2 C1 O1 O5 238.2 239.6
C2 C1 O1 H1 120.0 119.8
O1 C1 C2 C3 180.7 181.4
O1 C1 C2 O2 300.6 301.4
O1 C1 C2 H2 60.5 61.6
O5 C1 O1 H1 241.8 240.2
O1 C1 O5 C5 169.8 172.3
C1 O1 C7 H71 59.9 180.0
C1 O1 C7 H72 298.0 299.9
C1 O1 C7 H73 178.6 59.9
C2 C1 O5 O1 122.4 120.2
C2 C1 O5 H1 238.5 240.0
O5 C1 C2 C3 59.8 61.3
O5 C1 C2 O2 179.7 181.2
O5 C1 C2 H2 299.7 301.4
O1 C1 O5 H1 116.1 119.8
O5 C1 O1 C7 293.0 300.2
C4 C5 O5 C1 61.8 67.5
C6 C5 O5 C1 186.9 187.6
C1 O5 C5 H5 301.5 307.5
C2 C1 H1 O1 239.1 240.2
C2 C1 H1 O5 121.6 120.3
H1 C1 C2 C3 298.5 301.2
H1 C1 C2 O2 58.4 61.2
H1 C1 C2 H2 178.4 181.4
O1 C1 H1 O5 242.5 240.1
H1 C1 O1 C7 51.2 60.1
H1 C1 O5 C5 53.7 52.5
C3 C2 C1 O1 180.7 181.4
C3 C2 C1 O5 59.8 61.3
C3 C2 C1 H1 298.5 301.2
C1 C2 C3 O2 119.6 119.9
C1 C2 C3 H2 240.5 240.2
O2 C2 C3 H2 120.9 120.2
C3 C2 O2 HO2 293.6 180.0
C4 C3 C2 O3 122.9 119.9
C4 C3 C2 H3 240.2 240.3
C2 C3 C4 C5 45.2 53.7
C2 C3 C4 O4 164.3 173.7
C2 C3 C4 H4 286.6 293.9
O3 C3 C2 H3 117.3 120.4
C2 C3 O3 HO3 188.7 299.3
O2 C2 C1 O1 300.6 301.4
O2 C2 C1 O5 179.7 181.2
O2 C2 C1 H1 58.4 61.2
C1 C2 O2 C3 240.7 240.4
C1 C2 O2 H2 119.5 120.2
C3 C2 O2 H2 238.9 239.8
O2 C2 C3 C4 191.4 186.4
O2 C2 C3 O3 68.5 66.5
O2 C2 C3 H3 311.2 306.1
H2 C2 C1 O1 60.5 61.6
H2 C2 C1 O5 299.7 301.4
H2 C2 C1 H1 178.4 181.4
C1 C2 H2 C3 119.4 119.5
C1 C2 H2 O2 240.3 239.8
C3 C2 H2 O2 120.9 120.3
H2 C2 C3 C4 70.5 66.1
H2 C2 C3 O3 307.6 306.2
H2 C2 C3 H3 190.3 185.8
H2 C2 O2 HO2 54.7 300.2
C4 C3 C2 O2 191.4 186.4
C4 C3 C2 H2 70.5 66.1
C2 C3 C4 O3 236.9 240.0
C2 C3 C4 H3 119.4 119.8
O3 C3 C4 H3 242.5 239.8
C4 C3 O3 HO3 64.5 180.0
C5 C4 C3 O4 240.9 240.0
C5 C4 C3 H4 118.6 119.8
C3 C4 C5 C6 188.8 178.7
C3 C4 C5 O5 309.8 298.8
C3 C4 C5 H5 68.6 58.9
O4 C4 C3 H4 237.7 239.8
C3 C4 O4 HO4 180.0 60.3
O3 C3 C2 O2 68.5 66.5
O3 C3 C2 H2 307.6 306.2
C2 C3 O3 C4 124.2 119.3
C2 C3 O3 H3 242.4 239.5
C4 C3 O3 H3 118.2 120.2
O3 C3 C4 C5 168.4 173.7
O3 C3 C4 O4 287.4 293.7
O3 C3 C4 H4 49.7 53.9
H3 C3 C2 O2 311.2 306.1
H3 C3 C2 H2 190.3 185.8
C2 C3 H3 C4 238.0 240.8
C2 C3 H3 O3 119.1 120.6
C4 C3 H3 O3 241.0 239.7
H3 C3 C4 C5 285.9 293.9
H3 C3 C4 O4 44.9 53.9
H3 C3 C4 H4 167.3 174.1
H3 C3 O3 HO3 306.3 59.8
C1 O5 C5 C4 61.8 67.5
C5 C4 C3 O3 168.4 173.7
C5 C4 C3 H3 285.9 293.9
C3 C4 C5 O4 119.3 120.1
C3 C4 C5 H4 241.6 240.2
O4 C4 C5 H4 122.4 120.1
C5 C4 O4 HO4 301.7 180.0
C6 C5 C4 O5 238.9 239.9
C6 C5 C4 H5 120.2 119.8
C4 C5 C6 O6 291.9 180.3
C4 C5 C6 H61 171.2 300.4
C4 C5 C6 H62 53.7 60.3
O5 C5 C4 H5 241.2 240.0
O4 C4 C3 O3 287.4 293.7
O4 C4 C3 H3 44.9 53.9
C3 C4 O4 C5 238.3 240.3
C3 C4 O4 H4 119.0 120.2
C5 C4 O4 H4 240.7 239.9
O4 C4 C5 C6 69.5 58.6
O4 C4 C5 O5 190.6 178.8
O4 C4 C5 H5 309.4 298.8
H4 C4 C3 O3 49.7 53.9
H4 C4 C3 H3 167.3 174.1
C3 C4 H4 C5 121.3 119.5
C3 C4 H4 O4 240.5 239.7
C5 C4 H4 O4 119.3 120.2
H4 C4 C5 C6 307.2 298.5
H4 C4 C5 O5 68.2 58.7
H4 C4 C5 H5 187.0 178.7
H4 C4 O4 HO4 61.0 300.1
C1 O5 C5 C6 186.9 187.6
C6 C5 C4 O4 69.5 58.6
C6 C5 C4 H4 307.2 298.5
C4 C5 C6 O5 122.8 120.4
C4 C5 C6 H5 238.0 240.2
O5 C5 C6 H5 115.3 119.8
O6 C6 C5 H61 120.7 240.0
O6 C6 C5 H62 238.2 120.0
C5 C6 O6 HO6 308.0 180.0
H61 C6 C5 H62 117.5 240.1
C5 O5 C1 H1 53.7 52.5
O5 C5 C4 O4 190.6 178.8
O5 C5 C4 H4 68.2 58.7
C4 C5 O5 C6 234.9 239.9
C4 C5 O5 H5 120.2 120.0
C6 C5 O5 H5 245.3 240.1
O5 C5 C6 O6 169.1 60.0
O5 C5 C6 H61 48.4 180.0
O5 C5 C6 H62 290.9 299.9
H5 C5 C4 O4 309.4 298.8
H5 C5 C4 H4 187.0 178.7
C4 C5 H5 C6 124.5 119.9
C4 C5 H5 O5 239.5 239.7
C6 C5 H5 O5 115.0 119.9
H5 C5 C6 O6 53.9 300.2
H5 C5 C6 H61 293.1 60.2
H5 C5 C6 H62 175.7 180.1
O6 C6 C5 O5 169.1 60.0
O6 C6 C5 H5 53.9 300.2
C5 C6 O6 H61 238.6 120.1
C5 C6 O6 H62 121.8 240.0
H61 C6 O6 H62 243.3 120.0
H61 C6 C5 O5 48.4 180.0
H61 C6 C5 H5 293.1 60.2
C5 C6 H61 O6 122.4 239.9
C5 C6 H61 H62 240.8 119.9
O6 C6 H61 H62 118.4 240.0
H61 C6 O6 HO6 69.5 59.9
H62 C6 C5 O5 290.9 299.9
H62 C6 C5 H5 175.7 180.1
C5 C6 H62 O6 237.1 120.1
C5 C6 H62 H61 119.3 240.0
O6 C6 H62 H61 242.2 120.0
H62 C6 O6 HO6 186.2 300.0
C7 O1 C1 O5 293.0 300.2
C7 O1 C1 H1 51.2 60.1
H71 C7 O1 H72 121.8 240.1
H71 C7 O1 H73 241.2 120.1
H72 C7 O1 H73 119.4 240.0
O1 C7 H71 H72 236.1 119.9
O1 C7 H71 H73 120.2 239.9
H72 C7 H71 H73 244.0 120.0
O1 C7 H72 H71 123.6 240.0
O1 C7 H72 H73 239.4 120.0
H71 C7 H72 H73 115.8 240.0
O1 C7 H73 H71 238.6 120.1
O1 C7 H73 H72 122.1 240.0
H71 C7 H73 H72 243.4 119.9
HO2 O2 C2 H2 54.7 300.2
HO3 O3 C3 H3 306.3 59.8
HO4 O4 C4 H4 61.0 300.1
HO6 O6 C6 H61 69.5 59.9
HO6 O6 C6 H62 186.2 300.0