PDB Chemical Component MG8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MG8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.518 1.520
C1 H11A 1.100 1.095
C1 H12A 1.100 1.095
C1 H13A 1.100 1.094
C2 C3 1.542 1.529
C2 H21 1.100 1.096
C2 H22 1.100 1.096
C3 C4 1.545 1.531
C3 H31 1.100 1.097
C3 H32 1.100 1.097
C4 C5 1.536 1.531
C4 H41 1.100 1.097
C4 H42 1.100 1.095
C5 C6 1.526 1.531
C5 H51 1.100 1.097
C5 H52 1.100 1.097
C6 C7 1.524 1.530
C6 H61 1.100 1.097
C6 H62 1.100 1.098
C7 C8 1.508 1.524
C7 H71 1.100 1.096
C7 H72 1.100 1.095
C8 O8   1.234
C8 N   1.399
N C9   1.458
N C15   1.460
C9 C10   1.534
C9 H91   1.094
C9 H92   1.095
C10 O10   1.426
C10 C11   1.544
C10 H10   1.097
O10 HO10   0.970
C11 O11   1.426
C11 C12   1.548
C11 H11   1.097
O11 HO11   0.970
C12 O12   1.426
C12 C13   1.545
C12 H12   1.097
O12 HO12   0.969
C13 O13   1.425
C13 C14   1.529
C13 H13   1.097
O13 HO13   0.970
C14 O14   1.418
C14 H141   1.095
C14 H142   1.095
O14 HO14   0.972
C15 H151   1.093
C15 H152   1.094
C15 H153   1.093

Bond Angles for MG8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 H11A 109.5 110.2
C2 C1 H12A 109.5 111.0
C2 C1 H13A 109.5 111.0
C1 C2 C3 114.4 111.5
C1 C2 H21 107.9 109.2
C1 C2 H22 106.7 109.1
H11A C1 H12A 109.4 108.0
H11A C1 H13A 109.5 108.1
H12A C1 H13A 109.5 108.3
C3 C2 H21 107.9 109.9
C3 C2 H22 106.8 109.9
C2 C3 C4 113.3 111.3
C2 C3 H31 108.2 109.6
C2 C3 H32 107.3 109.5
H21 C2 H22 113.4 107.2
C4 C3 H31 108.2 109.6
C4 C3 H32 107.3 109.6
C3 C4 C5 112.1 111.2
C3 C4 H41 108.6 109.5
C3 C4 H42 108.0 109.0
H31 C3 H32 112.5 107.2
C5 C4 H41 108.6 109.6
C5 C4 H42 108.0 110.0
C4 C5 C6 115.9 113.4
C4 C5 H51 107.4 109.7
C4 C5 H52 105.9 109.0
H41 C4 H42 111.6 107.3
C6 C5 H51 107.4 109.6
C6 C5 H52 105.9 108.2
C5 C6 C7 108.0 113.4
C5 C6 H61 110.0 109.7
C5 C6 H62 110.3 108.1
H51 C5 H52 114.6 106.7
C7 C6 H61 110.0 109.8
C7 C6 H62 110.3 109.2
C6 C7 C8 113.0 112.6
C6 C7 H71 108.3 109.1
C6 C7 H72 107.5 109.7
H61 C6 H62 108.3 106.3
C8 C7 H71 108.3 108.4
C8 C7 H72 107.5 107.8
C7 C8 O8   120.4
C7 C8 N   116.2
H71 C7 H72 112.3 109.2
O8 C8 N   123.4
C8 N C9   122.4
C8 N C15   122.4
C9 N C15   115.2
N C9 C10   109.8
N C9 H91   108.2
N C9 H92   108.6
N C15 H151   110.1
N C15 H152   110.2
N C15 H153   110.3
C10 C9 H91   111.4
C10 C9 H92   110.5
C9 C10 O10   108.5
C9 C10 C11   112.0
C9 C10 H10   109.5
H91 C9 H92   108.2
O10 C10 C11   109.3
O10 C10 H10   108.1
C10 O10 HO10   106.5
C11 C10 H10   109.3
C10 C11 O11   109.0
C10 C11 C12   113.5
C10 C11 H11   108.2
O11 C11 C12   109.1
O11 C11 H11   108.1
C11 O11 HO11   106.4
C12 C11 H11   108.8
C11 C12 O12   110.1
C11 C12 C13   113.1
C11 C12 H12   109.3
O12 C12 C13   108.3
O12 C12 H12   107.7
C12 O12 HO12   106.5
C13 C12 H12   108.1
C12 C13 O13   109.2
C12 C13 C14   113.5
C12 C13 H13   108.7
O13 C13 C14   108.5
O13 C13 H13   107.9
C13 O13 HO13   106.5
C14 C13 H13   108.8
C13 C14 O14   110.2
C13 C14 H141   111.5
C13 C14 H142   110.1
O14 C14 H141   109.3
O14 C14 H142   108.7
C14 O14 HO14   106.9
H141 C14 H142   107.0
H151 C15 H152   108.8
H151 C15 H153   108.8
H152 C15 H153   108.6

Torsion Angles for MG8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H11A C1 C2 H12A 240.0 240.3
H11A C1 C2 H13A 120.0 119.8
H12A C1 C2 H13A 240.0 239.4
C3 C2 C1 H21 240.0 238.4
C3 C2 C1 H22 117.8 121.5
C1 C2 C3 C4 166.9 178.7
C1 C2 C3 H31 286.9 300.0
C1 C2 C3 H32 48.6 57.3
H21 C2 C1 H22 237.8 243.1
C2 C1 H11A H12A 120.0 121.5
C2 C1 H11A H13A 240.0 238.5
H11A C1 C2 C3 133.6 180.3
H11A C1 C2 H21 253.6 301.9
H11A C1 C2 H22 15.7 58.8
H12A C1 H11A H13A 120.0 117.0
C2 C1 H12A H11A 240.0 239.0
C2 C1 H12A H13A 120.0 122.1
H12A C1 C2 C3 253.5 300.0
H12A C1 C2 H21 13.5 61.6
H12A C1 C2 H22 135.7 178.5
H11A C1 H12A H13A 240.0 243.1
C2 C1 H13A H11A 120.0 121.0
C2 C1 H13A H12A 240.0 237.9
H13A C1 C2 C3 13.6 60.6
H13A C1 C2 H21 133.6 182.1
H13A C1 C2 H22 255.7 299.0
H11A C1 H13A H12A 120.0 116.8
C3 C2 C1 H11A 133.6 180.3
C3 C2 C1 H12A 253.5 300.0
C3 C2 C1 H13A 13.6 60.6
C1 C2 C3 H21 120.0 121.2
C1 C2 C3 H22 242.2 238.9
H21 C2 C3 H22 122.2 117.7
C4 C3 C2 H31 240.0 238.7
C4 C3 C2 H32 118.3 121.3
C2 C3 C4 C5 193.0 181.3
C2 C3 C4 H41 313.0 60.0
C2 C3 C4 H42 74.2 302.8
H31 C3 C2 H32 238.3 242.7
H21 C2 C1 H11A 253.6 301.9
H21 C2 C1 H12A 13.5 61.6
H21 C2 C1 H13A 133.6 182.1
C1 C2 H21 C3 236.0 237.5
C1 C2 H21 H22 118.0 118.1
C3 C2 H21 H22 242.0 240.6
H21 C2 C3 C4 46.9 57.5
H21 C2 C3 H31 166.9 178.8
H21 C2 C3 H32 288.6 296.2
H22 C2 C1 H11A 15.7 58.8
H22 C2 C1 H12A 135.7 178.5
H22 C2 C1 H13A 255.7 299.0
C1 C2 H22 C3 122.7 122.5
C1 C2 H22 H21 241.4 241.9
C3 C2 H22 H21 118.7 119.4
H22 C2 C3 C4 284.7 299.8
H22 C2 C3 H31 44.7 61.1
H22 C2 C3 H32 166.4 178.4
C4 C3 C2 H21 46.9 57.5
C4 C3 C2 H22 284.7 299.8
C2 C3 C4 H31 120.0 121.3
C2 C3 C4 H32 241.7 238.7
H31 C3 C4 H32 121.7 117.3
C5 C4 C3 H41 240.0 121.3
C5 C4 C3 H42 118.9 238.5
C3 C4 C5 C6 190.4 178.7
C3 C4 C5 H51 310.4 55.8
C3 C4 C5 H52 73.3 299.3
H41 C4 C3 H42 238.9 117.2
H31 C3 C2 H21 166.9 178.8
H31 C3 C2 H22 44.7 61.1
C2 C3 H31 C4 236.8 237.6
C2 C3 H31 H32 118.4 118.8
C4 C3 H31 H32 241.6 241.2
H31 C3 C4 C5 73.0 60.0
H31 C3 C4 H41 193.0 298.6
H31 C3 C4 H42 314.2 181.4
H32 C3 C2 H21 288.6 296.2
H32 C3 C2 H22 166.4 178.4
C2 C3 H32 C4 122.1 122.4
C2 C3 H32 H31 241.1 241.2
C4 C3 H32 H31 118.9 118.8
H32 C3 C4 C5 311.4 302.6
H32 C3 C4 H41 71.4 181.3
H32 C3 C4 H42 192.5 64.1
C5 C4 C3 H31 73.0 60.0
C5 C4 C3 H32 311.4 302.6
C3 C4 C5 H41 120.0 238.7
C3 C4 C5 H42 241.1 120.9
H41 C4 C5 H42 121.1 242.2
C6 C5 C4 H51 240.0 122.9
C6 C5 C4 H52 117.1 239.4
C4 C5 C6 C7 165.9 177.0
C4 C5 C6 H61 285.9 300.2
C4 C5 C6 H62 45.3 55.7
H51 C5 C4 H52 237.1 116.5
H41 C4 C3 H31 193.0 298.6
H41 C4 C3 H32 71.4 181.3
C3 C4 H41 C5 237.9 122.3
C3 C4 H41 H42 118.9 241.8
C5 C4 H41 H42 241.1 119.5
H41 C4 C5 C6 70.4 300.0
H41 C4 C5 H51 190.4 177.1
H41 C4 C5 H52 313.3 60.5
H42 C4 C3 H31 314.2 181.4
H42 C4 C3 H32 192.5 64.1
C3 C4 H42 C5 121.4 237.8
C3 C4 H42 H41 240.7 118.6
C5 C4 H42 H41 119.3 240.8
H42 C4 C5 C6 309.3 57.8
H42 C4 C5 H51 69.3 294.9
H42 C4 C5 H52 192.1 178.4
C6 C5 C4 H41 70.4 300.0
C6 C5 C4 H42 309.3 57.8
C4 C5 C6 H51 120.0 237.0
C4 C5 C6 H52 242.9 121.1
H51 C5 C6 H52 122.9 244.1
C7 C6 C5 H61 240.0 236.8
C7 C6 C5 H62 120.6 121.3
C5 C6 C7 C8 167.8 183.1
C5 C6 C7 H71 287.8 303.5
C5 C6 C7 H72 49.3 63.0
H61 C6 C5 H62 240.6 244.5
H51 C5 C4 H41 190.4 177.1
H51 C5 C4 H42 69.3 294.9
C4 C5 H51 C6 234.7 125.1
C4 C5 H51 H52 117.4 242.0
C6 C5 H51 H52 242.6 116.9
H51 C5 C6 C7 45.9 300.0
H51 C5 C6 H61 165.9 63.2
H51 C5 C6 H62 285.3 178.7
H52 C5 C4 H41 313.3 60.5
H52 C5 C4 H42 192.1 178.4
C4 C5 H52 C6 123.6 236.2
C4 C5 H52 H51 241.8 118.4
C6 C5 H52 H51 118.2 242.2
H52 C5 C6 C7 283.0 55.9
H52 C5 C6 H61 43.0 179.1
H52 C5 C6 H62 162.4 294.7
C7 C6 C5 H51 45.9 300.0
C7 C6 C5 H52 283.0 55.9
C5 C6 C7 H61 120.0 123.1
C5 C6 C7 H62 239.4 239.3
H61 C6 C7 H62 119.4 116.2
C8 C7 C6 H71 240.0 239.6
C8 C7 C6 H72 118.5 120.1
C6 C7 C8 O8   359.9
C6 C7 C8 N   180.0
H71 C7 C6 H72 238.5 240.5
H61 C6 C5 H51 165.9 63.2
H61 C6 C5 H52 43.0 179.1
C5 C6 H61 C7 241.2 234.7
C5 C6 H61 H62 120.6 116.7
C7 C6 H61 H62 239.4 242.0
H61 C6 C7 C8 47.8 60.0
H61 C6 C7 H71 167.8 180.4
H61 C6 C7 H72 289.3 299.9
H62 C6 C5 H51 285.3 178.7
H62 C6 C5 H52 162.4 294.7
C5 C6 H62 C7 119.2 123.9
C5 C6 H62 H61 239.6 242.3
C7 C6 H62 H61 120.4 118.4
H62 C6 C7 C8 288.3 303.8
H62 C6 C7 H71 48.3 64.2
H62 C6 C7 H72 169.9 183.7
C8 C7 C6 H61 47.8 60.0
C8 C7 C6 H62 288.3 303.8
C6 C7 C8 H71 120.0 120.8
C6 C7 C8 H72 241.5 238.9
H71 C7 C8 H72 121.5 118.1
O8 C8 C7 N   179.9
C7 C8 N C9   179.8
C7 C8 N C15   359.9
H71 C7 C6 H61 167.8 180.4
H71 C7 C6 H62 48.3 64.2
C6 C7 H71 C8 237.1 237.1
C6 C7 H71 H72 118.6 119.8
C8 C7 H71 H72 241.5 242.8
H71 C7 C8 O8   239.1
H71 C7 C8 N   59.2
H72 C7 C6 H61 289.3 299.9
H72 C7 C6 H62 169.9 183.7
C6 C7 H72 C8 121.9 122.9
C6 C7 H72 H71 240.9 240.5
C8 C7 H72 H71 119.0 117.6
H72 C7 C8 O8   121.0
H72 C7 C8 N   301.1
O8 C8 C7 H71   239.1
O8 C8 C7 H72   121.0
C7 C8 O8 N   180.1
O8 C8 N C9   360.0
O8 C8 N C15   180.0
N C8 C7 H71   59.2
N C8 C7 H72   301.1
C7 C8 N O8   179.9
C9 N C8 C15   179.9
C8 N C9 C10   120.0
C8 N C9 H91   241.8
C8 N C9 H92   359.1
C8 N C15 H151   28.2
C8 N C15 H152   268.2
C8 N C15 H153   148.2
C8 N C9 C15   180.1
C9 N C15 H151   208.2
C9 N C15 H152   88.2
C9 N C15 H153   328.3
C10 C9 N H91   238.3
C10 C9 N H92   121.0
N C9 C10 O10   300.5
N C9 C10 C11   179.8
N C9 C10 H10   58.3
H91 C9 N H92   242.7
C8 N C15 C9   179.9
C15 N C9 C10   300.0
C15 N C9 H91   61.7
C15 N C9 H92   179.0
H151 C15 N H152   120.0
H151 C15 N H153   239.9
H152 C15 N H153   119.9
C10 C9 N C15   300.0
N C9 C10 H91   119.8
N C9 C10 H92   240.2
H91 C9 C10 H92   120.4
O10 C10 C9 C11   120.7
O10 C10 C9 H10   242.2
C9 C10 O10 HO10   332.9
C11 C10 C9 H10   121.5
C9 C10 C11 O11   302.7
C9 C10 C11 C12   180.8
C9 C10 C11 H11   60.0
H91 C9 N C15   61.7
N C9 H91 C10   239.2
N C9 H91 H92   117.5
C10 C9 H91 H92   238.3
H91 C9 C10 O10   180.7
H91 C9 C10 C11   60.0
H91 C9 C10 H10   298.5
H92 C9 N C15   179.0
N C9 H92 C10   120.5
N C9 H92 H91   242.7
C10 C9 H92 H91   122.2
H92 C9 C10 O10   60.3
H92 C9 C10 C11   299.6
H92 C9 C10 H10   178.1
O10 C10 C9 H91   180.7
O10 C10 C9 H92   60.3
C9 C10 O10 C11   237.6
C9 C10 O10 H10   118.7
C11 C10 O10 H10   241.1
O10 C10 C11 O11   182.4
O10 C10 C11 C12   60.6
O10 C10 C11 H11   299.7
C11 C10 C9 H91   60.0
C11 C10 C9 H92   299.6
C9 C10 C11 O10   120.3
C9 C10 C11 H10   238.4
O10 C10 C11 H10   118.1
C11 C10 O10 HO10   95.3
O11 C11 C10 C12   121.9
O11 C11 C10 H11   242.7
C10 C11 O11 HO11   223.7
C12 C11 C10 H11   120.8
C10 C11 C12 O12   301.8
C10 C11 C12 C13   180.5
C10 C11 C12 H12   60.0
H10 C10 C9 H91   298.5
H10 C10 C9 H92   178.1
C9 C10 H10 O10   241.9
C9 C10 H10 C11   123.1
O10 C10 H10 C11   241.1
H10 C10 O10 HO10   214.2
H10 C10 C11 O11   64.3
H10 C10 C11 C12   302.4
H10 C10 C11 H11   181.6
HO10 O10 C10 C11   95.3
HO10 O10 C10 H10   214.2
O11 C11 C10 H10   64.3
C10 C11 O11 C12   235.5
C10 C11 O11 H11   117.4
C12 C11 O11 H11   241.9
O11 C11 C12 O12   180.0
O11 C11 C12 C13   58.7
O11 C11 C12 H12   298.2
C12 C11 C10 H10   302.4
C10 C11 C12 O11   121.8
C10 C11 C12 H11   239.5
O11 C11 C12 H11   117.7
C12 C11 O11 HO11   348.2
O12 C12 C11 C13   121.3
O12 C12 C11 H12   241.9
C11 C12 O12 HO12   329.4
C13 C12 C11 H12   120.5
C11 C12 C13 O13   180.0
C11 C12 C13 C14   58.8
C11 C12 C13 H13   297.6
H11 C11 C10 H10   181.6
C10 C11 H11 O11   242.1
C10 C11 H11 C12   123.7
O11 C11 H11 C12   241.7
H11 C11 O11 HO11   106.4
H11 C11 C12 O12   62.3
H11 C11 C12 C13   301.0
H11 C11 C12 H12   180.5
HO11 O11 C11 C12   348.2
HO11 O11 C11 H11   106.4
O12 C12 C11 H11   62.3
C11 C12 O12 C13   235.9
C11 C12 O12 H12   119.1
C13 C12 O12 H12   243.2
O12 C12 C13 O13   57.8
O12 C12 C13 C14   296.5
O12 C12 C13 H13   175.3
C13 C12 C11 H11   301.0
C11 C12 C13 O12   122.3
C11 C12 C13 H12   238.8
O12 C12 C13 H12   116.5
C13 C12 O12 HO12   93.5
O13 C13 C12 C14   121.2
O13 C13 C12 H13   242.5
C12 C13 O13 HO13   44.2
C14 C13 C12 H13   121.2
C12 C13 C14 O14   181.6
C12 C13 C14 H141   60.0
C12 C13 C14 H142   301.5
H12 C12 C11 H11   180.5
C11 C12 H12 O12   240.4
C11 C12 H12 C13   123.5
O12 C12 H12 C13   243.1
H12 C12 O12 HO12   210.3
H12 C12 C13 O13   301.2
H12 C12 C13 C14   180.0
H12 C12 C13 H13   58.8
HO12 O12 C12 C13   93.5
HO12 O12 C12 H12   210.3
O13 C13 C12 H12   301.2
C12 C13 O13 C14   235.8
C12 C13 O13 H13   118.0
C14 C13 O13 H13   242.2
O13 C13 C14 O14   60.0
O13 C13 C14 H141   298.4
O13 C13 C14 H142   179.9
C14 C13 C12 H12   180.0
C12 C13 C14 O13   121.6
C12 C13 C14 H13   238.8
O13 C13 C14 H13   117.2
C14 C13 O13 HO13   168.4
O14 C14 C13 H141   121.5
O14 C14 C13 H142   240.1
C13 C14 O14 HO14   41.2
H141 C14 C13 H142   118.6
H13 C13 C12 H12   58.8
C12 C13 H13 O13   241.7
C12 C13 H13 C14   124.0
O13 C13 H13 C14   242.4
H13 C13 O13 HO13   286.2
H13 C13 C14 O14   302.7
H13 C13 C14 H141   181.2
H13 C13 C14 H142   62.6
HO13 O13 C13 C14   168.4
HO13 O13 C13 H13   286.2
O14 C14 C13 H13   302.7
C13 C14 O14 H141   237.2
C13 C14 O14 H142   120.8
H141 C14 O14 H142   243.6
H141 C14 C13 H13   181.2
C13 C14 H141 O14   122.1
C13 C14 H141 H142   239.5
O14 C14 H141 H142   117.5
H141 C14 O14 HO14   164.0
H142 C14 C13 H13   62.6
C13 C14 H142 O14   239.2
C13 C14 H142 H141   121.3
O14 C14 H142 H141   242.1
H142 C14 O14 HO14   280.4
HO14 O14 C14 H141   164.0
HO14 O14 C14 H142   280.4
N C15 H151 H152   239.1
N C15 H151 H153   120.9
H152 C15 H151 H153   241.8
N C15 H152 H151   120.8
N C15 H152 H153   239.1
H151 C15 H152 H153   118.3
N C15 H153 H151   239.2
N C15 H153 H152   120.9
H151 C15 H153 H152   241.7