PDB Chemical Component MG1

Ideal Model

Chemical Description

Name 2'-DEOXY-1-METHYLGUANOSINE 5'-(DIHYDROGEN PHOSPHATE)
Formula C11 H16 N5 O7 P
Formal charge 0
Molecular weight 361.248 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 40
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 HO3'
Bond count 42
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-1-methylguanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(2-amino-1-methyl-6-oxo-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CN1C(=Nc2n(cnc2C1=O)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)N
SMILES (CACTVS) CN1C(=Nc2n(cnc2C1=O)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)N
Stereo SMILES (OpenEye) CN1C(=O)c2c(n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N=C1N
InChI descriptor InChI=1S/C11H16N5O7P/c1-15-10(18)8-9(14-11(15)12)16(4-13-8)7-2-5(17)6(23-7)3-22-24(19,20)21/h4-7,17H,2-3H2,1H3,(H2,12,14)(H2,19,20,21)/t5-,6+,7+/m0/s1
InChIKey descriptor GQIQEQNQLGRCMV-RRKCRQDMSA-N

Status Information

Last modified 2011-06-04
Created 2007-03-07
Release status REL
Processing site PDBJ