PDB Chemical Component MDA

Ideal Model

Chemical Description

Name 2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranose
Synonyms 2,6-DIDEOXY-3 C-METHYL-D-RIBOPYRANOSIDE; 2,6-dideoxy-3-C-methyl-beta-D-ribo-hexose; 2,6-dideoxy-3-C-methyl-D-ribo-hexose; 2,6-dideoxy-3-C-methyl-ribo-hexose
Formula C7 H14 O4
Formal charge 0
Molecular weight 162.184 g/mol
Component type D-saccharide, beta linking

Chemical features

Atom count 25
Chiral atom count 4
Chiral atoms C1 C3 C4 C5
Observed leaving atoms O1 HO1 HO3 HO4
Bond count 25
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranose
Systematic name (OpenEye OEToolkits) (2R,4S,5R,6R)-4,6-dimethyloxane-2,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@H]1O[C@@H](O)C[C@](C)(O)[C@@H]1O
SMILES (CACTVS) C[CH]1O[CH](O)C[C](C)(O)[CH]1O
Stereo SMILES (OpenEye) C[C@@H]1[C@H]([C@@](C[C@@H](O1)O)(C)O)O
InChI descriptor InChI=1S/C7H14O4/c1-4-6(9)7(2,10)3-5(8)11-4/h4-6,8-10H,3H2,1-2H3/t4-,5-,6-,7+/m1/s1
InChIKey descriptor YQLFLCVNXSPEKQ-GBNDHIKLSA-N

Status Information

Last modified 2020-07-17
Created 1999-07-08
Release status REL
Replaces DDB
Model PDB code 146D
Processing site RCSB