PDB Chemical Component MBT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MBT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C14	1.402	1.419
C1	N6	1.331	1.313
C1	C2	1.420	1.474
C2	S3	1.793	1.728
C2	C11	1.383	1.385
S3	C4	1.785	1.728
C4	C7	1.370	1.385
C4	C5	1.451	1.474
C5	N6	1.326	1.313
C5	C10	1.411	1.419
C7	C8	1.381	1.383
C7	H7	1.080	1.080
C8	C9	1.397	1.403
C8	N15	1.287	1.392
C9	C10	1.427	1.353
C9	H9	1.080	1.081
C10	H10	1.080	1.079
C11	C12	1.400	1.383
C11	H11	1.080	1.080
C12	N18	1.412	1.392
C12	C13	1.421	1.403
C13	C14	1.416	1.353
C13	H13	1.080	1.081
C14	H14	1.080	1.079
N15	C16	1.450	1.465
N15	C17	1.443	1.465
C16	H161	1.100	1.090
C16	H162	1.100	1.089
C16	H163	1.100	1.091
C17	H171	1.100	1.090
C17	H172	1.100	1.091
C17	H173	1.100	1.090
N18	C19	1.467	1.465
N18	C20	1.476	1.465
C19	H191	1.100	1.091
C19	H192	1.100	1.090
C19	H193	1.100	1.090
C20	H201	1.100	1.089
C20	H202	1.100	1.091
C20	H203	1.100	1.090

Bond Angles for MBT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N6	C1	C14	119.3	120.7
C2	C1	C14	117.5	116.8
C1	C14	C13	120.2	120.0
C1	C14	H14	119.9	120.0
C2	C1	N6	123.1	122.4
C1	N6	C5	132.6	132.7
C1	C2	S3	116.9	115.5
C1	C2	C11	123.1	121.3
S3	C2	C11	120.1	123.2
C2	S3	C4	108.3	111.5
C2	C11	C12	119.5	118.7
C2	C11	H11	120.3	120.6
S3	C4	C7	124.4	123.2
S3	C4	C5	116.1	115.5
C5	C4	C7	119.5	121.3
C4	C7	C8	128.0	118.7
C4	C7	H7	116.0	120.6
C4	C5	N6	123.0	122.4
C4	C5	C10	117.0	116.8
N6	C5	C10	120.0	120.7
C5	C10	C9	116.7	120.0
C5	C10	H10	121.6	120.0
C8	C7	H7	116.0	120.6
C7	C8	C9	110.0	120.6
C7	C8	N15	123.9	119.7
C9	C8	N15	126.1	119.7
C8	C9	C10	128.7	122.5
C8	C9	H9	115.7	118.8
C8	N15	C16	127.4	120.0
C8	N15	C17	127.0	120.0
C10	C9	H9	115.6	118.7
C9	C10	H10	121.6	120.0
C12	C11	H11	120.3	120.6
C11	C12	N18	120.2	119.7
C11	C12	C13	119.0	120.6
C13	C12	N18	120.7	119.7
C12	N18	C19	120.9	120.0
C12	N18	C20	121.8	120.0
C12	C13	C14	120.7	122.5
C12	C13	H13	119.6	118.8
C14	C13	H13	119.7	118.7
C13	C14	H14	119.9	120.0
C16	N15	C17	105.6	120.0
N15	C16	H161	109.5	109.5
N15	C16	H162	109.5	109.5
N15	C16	H163	109.5	109.5
N15	C17	H171	109.5	109.4
N15	C17	H172	109.4	109.5
N15	C17	H173	109.4	109.5
H161	C16	H162	109.5	109.5
H161	C16	H163	109.4	109.4
H162	C16	H163	109.5	109.5
H171	C17	H172	109.4	109.4
H171	C17	H173	109.5	109.5
H172	C17	H173	109.5	109.5
C19	N18	C20	117.1	120.0
N18	C19	H191	109.5	109.5
N18	C19	H192	109.5	109.5
N18	C19	H193	109.5	109.5
N18	C20	H201	109.5	109.5
N18	C20	H202	109.5	109.5
N18	C20	H203	109.4	109.5
H191	C19	H192	109.5	109.5
H191	C19	H193	109.4	109.4
H192	C19	H193	109.5	109.5
H201	C20	H202	109.5	109.4
H201	C20	H203	109.5	109.5
H202	C20	H203	109.4	109.5

Torsion Angles for MBT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C14	N6	180.9	180.3
C14	C1	N6	C5	181.4	179.6
C14	C1	C2	S3	180.4	180.0
C14	C1	C2	C11	1.3	0.0
C12	C13	C14	C1	0.2	0.1
C1	C14	C13	H13	180.2	180.1
C13	C14	C1	H14	180.0	179.8
C2	C1	N6	C14	179.1	179.7
N6	C1	C14	C13	177.9	179.7
N6	C1	C14	H14	357.9	359.9
N6	C1	C2	S3	1.3	0.3
N6	C1	C2	C11	182.2	180.3
C4	C5	N6	C1	358.8	0.6
C1	N6	C5	C10	178.3	180.4
N6	C1	C2	C14	180.9	180.3
C2	C1	C14	C13	358.8	360.0
C2	C1	C14	H14	178.8	180.2
C2	C1	N6	C5	0.4	359.4
S3	C2	C1	C11	179.1	180.0
C1	C2	S3	C4	358.1	-0.0
C1	C2	C11	C12	359.8	360.0
C1	C2	C11	H11	179.8	180.0
S3	C2	C1	C14	180.4	180.0
S3	C2	C1	N6	1.3	0.3
C1	C2	S3	C11	180.9	180.0
S3	C2	C11	C12	180.7	180.0
S3	C2	C11	H11	0.7	0.1
C2	S3	C4	C7	182.0	180.0
C2	S3	C4	C5	1.2	-0.0
C11	C2	C1	C14	1.3	0.0
C11	C2	C1	N6	182.2	180.3
C1	C2	C11	S3	179.1	179.9
C11	C2	S3	C4	177.3	180.0
C12	C11	C2	H11	180.0	180.0
C2	C11	C12	N18	178.2	180.0
C2	C11	C12	C13	359.2	0.0
C4	S3	C2	C11	177.3	180.0
C5	C4	S3	C7	179.2	180.0
S3	C4	C7	C8	179.0	180.0
S3	C4	C7	H7	359.0	359.9
S3	C4	C5	N6	0.1	359.7
S3	C4	C5	C10	180.6	180.0
S3	C4	C7	C5	179.2	179.9
C7	C4	C5	N6	179.4	179.7
C7	C4	C5	C10	359.9	360.0
C8	C7	C4	H7	180.0	180.0
C4	C7	C8	C9	0.3	360.0
C4	C7	C8	N15	180.3	180.0
C1	N6	C5	C4	358.8	0.6
S3	C4	C5	C7	180.8	180.0
C5	C4	C7	C8	359.8	0.0
C5	C4	C7	H7	179.8	180.0
N6	C5	C4	C10	179.5	179.7
C4	C5	C10	C9	0.3	0.0
C4	C5	C10	H10	180.3	180.1
C5	N6	C1	C14	181.4	179.6
N6	C5	C4	C7	179.4	179.7
C4	C5	N6	C10	180.5	180.3
N6	C5	C10	C9	180.8	180.3
N6	C5	C10	H10	0.8	0.3
C10	C5	C4	C7	359.9	360.0
C4	C5	C10	N6	179.5	179.7
C8	C9	C10	C5	359.8	359.9
C5	C10	C9	H9	179.8	180.0
C9	C10	C5	H10	180.0	180.0
C4	C7	C8	H7	180.0	180.0
C9	C8	C7	N15	180.0	180.0
C7	C8	C9	C10	359.9	0.1
C7	C8	C9	H9	179.9	180.0
C7	C8	N15	C16	359.8	-0.0
C7	C8	N15	C17	180.0	180.0
C4	C7	H7	C8	180.0	180.0
H7	C7	C8	C9	180.3	180.0
H7	C7	C8	N15	0.3	-0.0
C5	C10	C9	C8	359.8	359.9
C9	C8	C7	H7	180.3	180.0
C7	C8	C9	N15	180.0	180.0
C9	C8	N15	C16	179.8	180.0
C9	C8	N15	C17	359.9	360.0
C10	C9	C8	H9	180.0	180.1
C8	C9	C10	H10	179.8	179.9
N15	C8	C7	H7	0.3	360.0
C7	C8	N15	C9	180.0	180.0
N15	C8	C9	C10	179.9	180.1
N15	C8	C9	H9	360.0	-0.0
C16	N15	C8	C17	179.8	180.0
C8	N15	C16	H161	22.8	89.9
C8	N15	C16	H162	142.9	210.0
C8	N15	C16	H163	262.9	330.0
C8	N15	C17	H171	181.9	90.1
C8	N15	C17	H172	301.8	210.0
C8	N15	C17	H173	61.9	330.0
C5	C10	C9	H10	180.0	180.0
C10	C9	C8	N15	179.9	180.1
C8	C9	C10	H9	180.0	179.9
H9	C9	C8	N15	360.0	-0.0
C8	C9	H9	C10	180.0	180.0
H9	C9	C10	H10	359.8	360.0
C5	C10	H10	C9	180.0	180.0
H10	C10	C9	H9	359.8	360.0
C2	C11	C12	H11	180.0	180.0
C13	C12	C11	N18	180.9	180.0
C11	C12	N18	C19	182.9	360.0
C11	C12	N18	C20	359.6	180.0
C11	C12	C13	C14	0.8	359.9
C11	C12	C13	H13	180.8	179.9
C2	C11	H11	C12	180.0	180.0
H11	C11	C12	N18	358.2	-0.0
H11	C11	C12	C13	179.2	180.0
N18	C12	C11	H11	358.2	360.0
C11	C12	N18	C13	181.0	180.0
N18	C12	C13	C14	181.8	179.9
N18	C12	C13	H13	1.8	359.9
C19	N18	C12	C20	183.3	179.9
C12	N18	C19	H191	340.5	90.0
C12	N18	C19	H192	100.5	210.0
C12	N18	C19	H193	220.6	330.1
C12	N18	C20	H201	194.1	90.0
C12	N18	C20	H202	314.1	210.0
C12	N18	C20	H203	74.1	330.0
C1	C14	C13	C12	0.2	0.1
C13	C12	C11	H11	179.2	180.0
C11	C12	C13	N18	179.1	180.0
C13	C12	N18	C19	2.0	180.0
C13	C12	N18	C20	178.7	0.0
C14	C13	C12	H13	180.0	180.0
C12	C13	C14	H14	180.2	179.8
C1	C14	C13	H14	180.0	180.2
C14	C13	C12	N18	181.8	179.9
C12	C13	C14	H13	180.0	180.0
H13	C13	C12	N18	1.8	359.9
C12	C13	H13	C14	180.0	180.0
H13	C13	C14	H14	0.2	359.8
C1	C14	H14	C13	180.0	179.8
H14	C14	C13	H13	0.2	359.8
C8	N15	C16	C17	180.1	180.0
C16	N15	C17	H171	2.0	270.0
C16	N15	C17	H172	122.0	30.0
C16	N15	C17	H173	242.0	150.0
H161	C16	N15	H162	240.0	240.0
H161	C16	N15	H163	120.0	119.9
H162	C16	N15	H163	240.0	240.0
C8	N15	C17	C16	179.9	180.0
C17	N15	C16	H161	202.7	270.0
C17	N15	C16	H162	322.7	30.0
C17	N15	C16	H163	82.7	150.1
H171	C17	N15	H172	240.0	240.1
H171	C17	N15	H173	120.0	120.0
H172	C17	N15	H173	239.9	240.0
H161	C16	N15	C17	202.7	270.0
N15	C16	H161	H162	120.0	120.1
N15	C16	H161	H163	240.0	240.0
H162	C16	H161	H163	120.0	120.0
H162	C16	N15	C17	322.7	30.0
N15	C16	H162	H161	240.0	240.0
N15	C16	H162	H163	120.0	120.0
H161	C16	H162	H163	240.0	240.1
H163	C16	N15	C17	82.7	150.1
N15	C16	H163	H161	120.0	120.0
N15	C16	H163	H162	240.0	239.9
H161	C16	H163	H162	120.0	120.0
N15	C17	H171	H172	120.0	120.0
N15	C17	H171	H173	240.0	240.0
H172	C17	H171	H173	120.1	120.0
N15	C17	H172	H171	240.0	240.1
N15	C17	H172	H173	120.0	120.0
H171	C17	H172	H173	240.0	240.0
N15	C17	H173	H171	120.0	120.0
N15	C17	H173	H172	240.0	240.0
H171	C17	H173	H172	120.0	120.0
C12	N18	C19	C20	176.9	180.1
C19	N18	C20	H201	10.9	270.1
C19	N18	C20	H202	130.9	30.1
C19	N18	C20	H203	250.9	150.0
H191	C19	N18	H192	240.0	240.0
H191	C19	N18	H193	120.0	119.9
H192	C19	N18	H193	240.0	239.9
C12	N18	C20	C19	183.2	179.9
C20	N18	C19	H191	163.7	269.9
C20	N18	C19	H192	283.7	29.9
C20	N18	C19	H193	43.7	150.0
H201	C20	N18	H202	240.0	240.0
H201	C20	N18	H203	120.0	120.1
H202	C20	N18	H203	240.0	240.0
H191	C19	N18	C20	163.7	269.9
N18	C19	H191	H192	120.0	120.1
N18	C19	H191	H193	240.0	240.0
H192	C19	H191	H193	120.0	120.0
H192	C19	N18	C20	283.7	29.9
N18	C19	H192	H191	240.0	240.0
N18	C19	H192	H193	120.0	120.1
H191	C19	H192	H193	240.0	240.1
H193	C19	N18	C20	43.7	150.0
N18	C19	H193	H191	120.0	120.0
N18	C19	H193	H192	240.0	239.9
H191	C19	H193	H192	120.0	120.0
N18	C20	H201	H202	120.0	120.0
N18	C20	H201	H203	240.0	240.0
H202	C20	H201	H203	120.0	120.0
N18	C20	H202	H201	240.0	240.0
N18	C20	H202	H203	120.0	120.0
H201	C20	H202	H203	240.0	240.0
N18	C20	H203	H201	120.0	120.1
N18	C20	H203	H202	240.0	240.0
H201	C20	H203	H202	120.0	120.0