PDB Chemical Component MBF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MBF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C1 |
1.436 |
1.429 |
O1 |
HO1 |
0.950 |
0.967 |
C1 |
C2 |
1.550 |
1.530 |
C1 |
O5 |
1.406 |
1.426 |
C1 |
H1 |
1.115 |
1.090 |
C2 |
F2 |
1.413 |
1.398 |
C2 |
C3 |
1.526 |
1.532 |
C2 |
H2 |
1.115 |
1.090 |
C3 |
O3 |
1.437 |
1.429 |
C3 |
C4 |
1.541 |
1.531 |
C3 |
H3 |
1.116 |
1.090 |
O3 |
HO3 |
0.950 |
0.966 |
C4 |
O4 |
1.411 |
1.429 |
C4 |
C5 |
1.527 |
1.530 |
C4 |
H4 |
1.115 |
1.090 |
O4 |
HO4 |
0.950 |
0.965 |
C5 |
O5 |
1.400 |
1.425 |
C5 |
C6 |
1.541 |
1.530 |
C5 |
H5 |
1.115 |
1.090 |
C6 |
O6 |
1.442 |
1.428 |
C6 |
H61 |
1.115 |
1.090 |
C6 |
H62 |
1.115 |
1.090 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for MBF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
O1 |
HO1 |
106.0 |
106.8 |
O1 |
C1 |
C2 |
106.0 |
109.4 |
O1 |
C1 |
O5 |
107.9 |
109.4 |
O1 |
C1 |
H1 |
110.9 |
109.4 |
C2 |
C1 |
O5 |
110.0 |
109.8 |
C2 |
C1 |
H1 |
111.0 |
109.4 |
C1 |
C2 |
F2 |
104.0 |
109.6 |
C1 |
C2 |
C3 |
113.7 |
109.0 |
C1 |
C2 |
H2 |
109.7 |
109.6 |
O5 |
C1 |
H1 |
110.9 |
109.4 |
C1 |
O5 |
C5 |
116.3 |
107.6 |
F2 |
C2 |
C3 |
110.0 |
109.6 |
F2 |
C2 |
H2 |
109.7 |
109.5 |
C3 |
C2 |
H2 |
109.7 |
109.6 |
C2 |
C3 |
O3 |
112.9 |
109.6 |
C2 |
C3 |
C4 |
107.4 |
108.6 |
C2 |
C3 |
H3 |
109.4 |
109.6 |
O3 |
C3 |
C4 |
108.2 |
109.8 |
O3 |
C3 |
H3 |
109.4 |
109.6 |
C3 |
O3 |
HO3 |
112.9 |
106.8 |
C4 |
C3 |
H3 |
109.4 |
109.6 |
C3 |
C4 |
O4 |
110.2 |
109.6 |
C3 |
C4 |
C5 |
109.2 |
109.0 |
C3 |
C4 |
H4 |
111.4 |
109.5 |
O4 |
C4 |
C5 |
102.8 |
109.6 |
O4 |
C4 |
H4 |
111.4 |
109.5 |
C4 |
O4 |
HO4 |
110.2 |
106.9 |
C5 |
C4 |
H4 |
111.4 |
109.6 |
C4 |
C5 |
O5 |
109.6 |
109.8 |
C4 |
C5 |
C6 |
111.6 |
109.5 |
C4 |
C5 |
H5 |
109.2 |
109.4 |
O5 |
C5 |
C6 |
108.0 |
109.4 |
O5 |
C5 |
H5 |
109.2 |
109.4 |
C6 |
C5 |
H5 |
109.2 |
109.4 |
C5 |
C6 |
O6 |
106.4 |
109.6 |
C5 |
C6 |
H61 |
113.3 |
109.4 |
C5 |
C6 |
H62 |
113.4 |
109.5 |
O6 |
C6 |
H61 |
113.3 |
109.4 |
O6 |
C6 |
H62 |
113.3 |
109.5 |
C6 |
O6 |
HO6 |
106.4 |
106.9 |
H61 |
C6 |
H62 |
97.1 |
109.4 |
Torsion Angles for MBF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
O5 |
242.2 |
239.7 |
C2 |
C1 |
O1 |
H1 |
120.5 |
119.9 |
O1 |
C1 |
C2 |
F2 |
296.8 |
61.3 |
O1 |
C1 |
C2 |
C3 |
56.4 |
181.3 |
O1 |
C1 |
C2 |
H2 |
179.6 |
301.2 |
O5 |
C1 |
O1 |
H1 |
238.3 |
240.1 |
O1 |
C1 |
O5 |
C5 |
265.4 |
172.4 |
HO1 |
O1 |
C1 |
C2 |
180.0 |
179.7 |
HO1 |
O1 |
C1 |
O5 |
297.8 |
300.0 |
HO1 |
O1 |
C1 |
H1 |
59.4 |
59.8 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
179.7 |
O1 |
C1 |
C2 |
O5 |
116.4 |
120.1 |
O1 |
C1 |
C2 |
H1 |
239.5 |
240.1 |
O5 |
C1 |
C2 |
H1 |
123.1 |
120.1 |
C2 |
C1 |
O5 |
C5 |
20.6 |
292.4 |
F2 |
C2 |
C1 |
C3 |
240.4 |
240.0 |
F2 |
C2 |
C1 |
H2 |
117.2 |
120.1 |
C3 |
C2 |
C1 |
H2 |
236.8 |
240.1 |
C1 |
C2 |
C3 |
O3 |
270.4 |
186.3 |
C1 |
C2 |
C3 |
C4 |
29.6 |
306.3 |
C1 |
C2 |
C3 |
H3 |
148.3 |
66.0 |
O5 |
C1 |
O1 |
HO1 |
297.8 |
300.0 |
O1 |
C1 |
O5 |
C2 |
244.8 |
240.0 |
O1 |
C1 |
O5 |
H1 |
121.7 |
119.9 |
C2 |
C1 |
O5 |
H1 |
236.9 |
239.9 |
O5 |
C1 |
C2 |
F2 |
180.4 |
301.3 |
O5 |
C1 |
C2 |
C3 |
300.0 |
61.2 |
O5 |
C1 |
C2 |
H2 |
63.2 |
181.1 |
C4 |
C5 |
O5 |
C1 |
41.2 |
67.6 |
C1 |
O5 |
C5 |
C6 |
162.9 |
187.8 |
C1 |
O5 |
C5 |
H5 |
281.6 |
307.6 |
H1 |
C1 |
O1 |
HO1 |
59.4 |
59.8 |
O1 |
C1 |
H1 |
C2 |
117.6 |
119.8 |
O1 |
C1 |
H1 |
O5 |
240.1 |
240.1 |
C2 |
C1 |
H1 |
O5 |
122.6 |
120.3 |
H1 |
C1 |
C2 |
F2 |
57.3 |
181.2 |
H1 |
C1 |
C2 |
C3 |
176.9 |
301.1 |
H1 |
C1 |
C2 |
H2 |
300.1 |
61.1 |
H1 |
C1 |
O5 |
C5 |
143.7 |
52.5 |
F2 |
C2 |
C1 |
O5 |
180.4 |
301.3 |
F2 |
C2 |
C1 |
H1 |
57.3 |
181.2 |
C1 |
C2 |
F2 |
C3 |
122.1 |
119.6 |
C1 |
C2 |
F2 |
H2 |
242.8 |
239.8 |
C3 |
C2 |
F2 |
H2 |
120.7 |
120.2 |
F2 |
C2 |
C3 |
O3 |
26.5 |
306.2 |
F2 |
C2 |
C3 |
C4 |
145.8 |
66.2 |
F2 |
C2 |
C3 |
H3 |
264.5 |
186.0 |
C3 |
C2 |
C1 |
O5 |
300.0 |
61.2 |
C3 |
C2 |
C1 |
H1 |
176.9 |
301.1 |
C1 |
C2 |
C3 |
F2 |
243.9 |
240.1 |
C1 |
C2 |
C3 |
H2 |
123.2 |
119.9 |
F2 |
C2 |
C3 |
H2 |
239.3 |
239.8 |
O3 |
C3 |
C2 |
C4 |
240.8 |
240.0 |
O3 |
C3 |
C2 |
H3 |
122.1 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
C4 |
C3 |
C2 |
H3 |
241.3 |
240.2 |
C2 |
C3 |
C4 |
O4 |
142.3 |
173.7 |
C2 |
C3 |
C4 |
C5 |
30.1 |
53.8 |
C2 |
C3 |
C4 |
H4 |
266.6 |
293.8 |
H2 |
C2 |
C1 |
O5 |
63.2 |
181.1 |
H2 |
C2 |
C1 |
H1 |
300.1 |
61.1 |
C1 |
C2 |
H2 |
F2 |
113.6 |
120.2 |
C1 |
C2 |
H2 |
C3 |
234.5 |
240.4 |
F2 |
C2 |
H2 |
C3 |
120.9 |
120.3 |
H2 |
C2 |
C3 |
O3 |
147.2 |
66.4 |
H2 |
C2 |
C3 |
C4 |
266.4 |
186.4 |
H2 |
C2 |
C3 |
H3 |
25.1 |
306.1 |
O3 |
C3 |
C2 |
H2 |
147.2 |
66.4 |
C2 |
C3 |
O3 |
C4 |
118.8 |
119.2 |
C2 |
C3 |
O3 |
H3 |
237.9 |
239.7 |
C4 |
C3 |
O3 |
H3 |
119.1 |
120.5 |
O3 |
C3 |
C4 |
O4 |
264.5 |
293.6 |
O3 |
C3 |
C4 |
C5 |
152.3 |
173.6 |
O3 |
C3 |
C4 |
H4 |
28.8 |
53.6 |
C4 |
C3 |
C2 |
H2 |
266.4 |
186.4 |
C2 |
C3 |
C4 |
O3 |
237.8 |
240.2 |
C2 |
C3 |
C4 |
H3 |
118.7 |
119.7 |
O3 |
C3 |
C4 |
H3 |
240.9 |
239.6 |
C4 |
C3 |
O3 |
HO3 |
61.2 |
180.8 |
O4 |
C4 |
C3 |
C5 |
112.2 |
120.0 |
O4 |
C4 |
C3 |
H4 |
235.7 |
239.9 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
59.9 |
C5 |
C4 |
C3 |
H4 |
123.5 |
119.9 |
C3 |
C4 |
C5 |
O5 |
289.5 |
298.7 |
C3 |
C4 |
C5 |
C6 |
169.8 |
178.6 |
C3 |
C4 |
C5 |
H5 |
49.1 |
58.8 |
H3 |
C3 |
C2 |
H2 |
25.1 |
306.1 |
C2 |
C3 |
H3 |
O3 |
124.1 |
120.3 |
C2 |
C3 |
H3 |
C4 |
242.5 |
240.9 |
O3 |
C3 |
H3 |
C4 |
118.4 |
120.6 |
H3 |
C3 |
O3 |
HO3 |
302.0 |
60.3 |
H3 |
C3 |
C4 |
O4 |
23.6 |
54.0 |
H3 |
C3 |
C4 |
C5 |
271.4 |
294.0 |
H3 |
C3 |
C4 |
H4 |
147.9 |
174.1 |
HO3 |
O3 |
C3 |
C4 |
61.2 |
180.8 |
HO3 |
O3 |
C3 |
H3 |
302.0 |
60.3 |
O4 |
C4 |
C3 |
H3 |
23.6 |
54.0 |
C3 |
C4 |
O4 |
C5 |
243.7 |
240.4 |
C3 |
C4 |
O4 |
H4 |
124.3 |
120.1 |
C5 |
C4 |
O4 |
H4 |
240.5 |
239.7 |
O4 |
C4 |
C5 |
O5 |
172.5 |
178.7 |
O4 |
C4 |
C5 |
C6 |
52.9 |
58.6 |
O4 |
C4 |
C5 |
H5 |
292.1 |
298.8 |
C1 |
O5 |
C5 |
C4 |
41.2 |
67.6 |
C5 |
C4 |
C3 |
H3 |
271.4 |
294.0 |
C3 |
C4 |
C5 |
O4 |
117.0 |
120.0 |
C3 |
C4 |
C5 |
H4 |
236.5 |
240.1 |
O4 |
C4 |
C5 |
H4 |
119.5 |
120.2 |
C5 |
C4 |
O4 |
HO4 |
296.2 |
179.5 |
O5 |
C5 |
C4 |
C6 |
119.6 |
120.1 |
O5 |
C5 |
C4 |
H5 |
240.4 |
239.9 |
C6 |
C5 |
C4 |
H5 |
120.8 |
119.8 |
C4 |
C5 |
C6 |
O6 |
64.7 |
180.2 |
C4 |
C5 |
C6 |
H61 |
299.4 |
60.2 |
C4 |
C5 |
C6 |
H62 |
190.0 |
300.2 |
H4 |
C4 |
C3 |
H3 |
147.9 |
174.1 |
C3 |
C4 |
H4 |
O4 |
236.4 |
239.8 |
C3 |
C4 |
H4 |
C5 |
122.2 |
119.6 |
O4 |
C4 |
H4 |
C5 |
245.8 |
239.7 |
H4 |
C4 |
O4 |
HO4 |
55.7 |
299.8 |
H4 |
C4 |
C5 |
O5 |
53.0 |
58.6 |
H4 |
C4 |
C5 |
C6 |
293.4 |
298.4 |
H4 |
C4 |
C5 |
H5 |
172.6 |
178.6 |
HO4 |
O4 |
C4 |
C5 |
296.2 |
179.5 |
HO4 |
O4 |
C4 |
H4 |
55.7 |
299.8 |
C5 |
O5 |
C1 |
H1 |
143.7 |
52.5 |
O5 |
C5 |
C4 |
H4 |
53.0 |
58.6 |
C4 |
C5 |
O5 |
C6 |
238.2 |
239.9 |
C4 |
C5 |
O5 |
H5 |
119.6 |
120.1 |
C6 |
C5 |
O5 |
H5 |
241.3 |
240.2 |
O5 |
C5 |
C6 |
O6 |
304.1 |
59.8 |
O5 |
C5 |
C6 |
H61 |
178.9 |
299.8 |
O5 |
C5 |
C6 |
H62 |
69.4 |
179.9 |
C6 |
C5 |
C4 |
H4 |
293.4 |
298.4 |
C4 |
C5 |
C6 |
O5 |
120.6 |
120.4 |
C4 |
C5 |
C6 |
H5 |
239.2 |
240.2 |
O5 |
C5 |
C6 |
H5 |
118.7 |
119.8 |
O6 |
C6 |
C5 |
H61 |
125.2 |
120.0 |
O6 |
C6 |
C5 |
H62 |
234.7 |
239.9 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.1 |
H61 |
C6 |
C5 |
H62 |
109.5 |
119.9 |
H5 |
C5 |
C4 |
H4 |
172.6 |
178.6 |
C4 |
C5 |
H5 |
O5 |
240.1 |
239.7 |
C4 |
C5 |
H5 |
C6 |
122.2 |
119.9 |
O5 |
C5 |
H5 |
C6 |
242.1 |
240.2 |
H5 |
C5 |
C6 |
O6 |
185.5 |
300.0 |
H5 |
C5 |
C6 |
H61 |
60.2 |
180.0 |
H5 |
C5 |
C6 |
H62 |
310.7 |
60.1 |
O6 |
C6 |
C5 |
H5 |
185.5 |
300.0 |
C5 |
C6 |
O6 |
H61 |
234.8 |
240.0 |
C5 |
C6 |
O6 |
H62 |
125.3 |
120.1 |
H61 |
C6 |
O6 |
H62 |
250.5 |
240.1 |
H61 |
C6 |
C5 |
H5 |
60.2 |
180.0 |
C5 |
C6 |
H61 |
O6 |
121.4 |
120.0 |
C5 |
C6 |
H61 |
H62 |
240.7 |
240.0 |
O6 |
C6 |
H61 |
H62 |
119.3 |
120.0 |
H61 |
C6 |
O6 |
HO6 |
305.2 |
300.0 |
H62 |
C6 |
C5 |
H5 |
310.7 |
60.1 |
C5 |
C6 |
H62 |
O6 |
238.5 |
239.9 |
C5 |
C6 |
H62 |
H61 |
119.3 |
119.9 |
O6 |
C6 |
H62 |
H61 |
240.7 |
240.1 |
H62 |
C6 |
O6 |
HO6 |
54.7 |
60.0 |
HO6 |
O6 |
C6 |
H61 |
305.2 |
300.0 |
HO6 |
O6 |
C6 |
H62 |
54.7 |
60.0 |