PDB Chemical Component MB2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MB2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O15 |
S13 |
1.441 |
1.421 |
| O14 |
S13 |
1.433 |
1.421 |
| S13 |
C16 |
1.597 |
1.762 |
| S13 |
N12 |
1.605 |
1.657 |
| C22 |
C16 |
1.396 |
1.382 |
| C22 |
C21 |
1.394 |
1.382 |
| C16 |
C17 |
1.396 |
1.383 |
| N12 |
C10 |
1.344 |
1.347 |
| C21 |
C19 |
1.391 |
1.385 |
| O11 |
C10 |
1.218 |
1.216 |
| C10 |
N9 |
1.330 |
1.348 |
| C17 |
C18 |
1.389 |
1.382 |
| C19 |
C18 |
1.392 |
1.384 |
| C19 |
F20 |
1.343 |
1.350 |
| N9 |
C8 |
1.362 |
1.400 |
| C8 |
C7 |
1.407 |
1.392 |
| C8 |
C23 |
1.381 |
1.389 |
| C7 |
C6 |
1.407 |
1.386 |
| C23 |
N24 |
1.325 |
1.318 |
| C6 |
C5 |
1.405 |
1.382 |
| N24 |
C5 |
1.341 |
1.318 |
| C5 |
S1 |
1.610 |
1.762 |
| N4 |
S1 |
1.599 |
1.656 |
| O3 |
S1 |
1.428 |
1.421 |
| S1 |
O2 |
1.443 |
1.421 |
| C18 |
H1 |
1.080 |
1.080 |
| C17 |
H2 |
1.080 |
1.080 |
| C21 |
H3 |
1.080 |
1.080 |
| C22 |
H4 |
1.081 |
1.080 |
| N12 |
H5 |
1.000 |
0.970 |
| N9 |
H6 |
1.000 |
0.970 |
| C7 |
H7 |
1.080 |
1.080 |
| C6 |
H8 |
1.080 |
1.080 |
| C23 |
H9 |
1.080 |
1.080 |
| N4 |
H10 |
1.000 |
0.970 |
| N4 |
H11 |
1.000 |
0.970 |
Bond Angles for MB2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O15 |
S13 |
N12 |
110.9 |
106.4 |
| O14 |
S13 |
N12 |
108.3 |
106.3 |
| S13 |
N12 |
C10 |
124.1 |
120.0 |
| S13 |
N12 |
H5 |
117.9 |
120.0 |
| C16 |
C22 |
H4 |
120.1 |
120.0 |
| C22 |
C21 |
H3 |
120.0 |
120.1 |
| C16 |
C17 |
H2 |
120.0 |
120.0 |
| N12 |
C10 |
N9 |
113.7 |
120.0 |
| C10 |
N12 |
H5 |
117.9 |
120.0 |
| O11 |
C10 |
N9 |
123.1 |
120.0 |
| C10 |
N9 |
C8 |
128.7 |
120.0 |
| C10 |
N9 |
H6 |
115.7 |
120.0 |
| C17 |
C18 |
H1 |
120.0 |
120.0 |
| C19 |
C18 |
H1 |
120.1 |
120.0 |
| N9 |
C8 |
C7 |
129.3 |
120.5 |
| N9 |
C8 |
C23 |
112.4 |
120.4 |
| C8 |
N9 |
H6 |
115.7 |
120.0 |
| C7 |
C8 |
C23 |
118.3 |
119.1 |
| C8 |
C7 |
C6 |
119.0 |
118.3 |
| C8 |
C7 |
H7 |
120.5 |
120.8 |
| C8 |
C23 |
N24 |
121.7 |
120.6 |
| C8 |
C23 |
H9 |
119.2 |
119.7 |
| C7 |
C6 |
C5 |
119.2 |
119.3 |
| C6 |
C7 |
H7 |
120.5 |
120.8 |
| C7 |
C6 |
H8 |
120.4 |
120.4 |
| C23 |
N24 |
C5 |
122.7 |
121.9 |
| N24 |
C23 |
H9 |
119.1 |
119.7 |
| C6 |
C5 |
N24 |
119.2 |
120.9 |
| C6 |
C5 |
S1 |
125.9 |
119.5 |
| C5 |
C6 |
H8 |
120.4 |
120.4 |
| N24 |
C5 |
S1 |
114.9 |
119.6 |
| C5 |
S1 |
O2 |
109.7 |
106.4 |
| H10 |
N4 |
H11 |
109.4 |
120.0 |
Torsion Angles for MB2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O14 |
S13 |
O15 |
N12 |
119.5 |
237.1 |
| O15 |
S13 |
N12 |
C10 |
322.9 |
178.5 |
| O15 |
S13 |
N12 |
H5 |
142.9 |
358.6 |
| O15 |
S13 |
O14 |
N12 |
238.9 |
122.9 |
| O14 |
S13 |
N12 |
C10 |
202.7 |
311.4 |
| O14 |
S13 |
N12 |
H5 |
22.7 |
131.5 |
| S13 |
C16 |
C22 |
H4 |
0.0 |
359.3 |
| S13 |
C16 |
C17 |
H2 |
359.9 |
0.2 |
| S13 |
N12 |
C10 |
N9 |
181.0 |
180.0 |
| C10 |
N12 |
S13 |
H5 |
180.0 |
179.9 |
| C16 |
C22 |
C21 |
H3 |
180.2 |
179.5 |
| C22 |
C16 |
C17 |
H2 |
180.1 |
179.4 |
| C16 |
C17 |
C18 |
H1 |
180.0 |
180.0 |
| S13 |
N12 |
C10 |
H5 |
180.0 |
180.1 |
| O11 |
C10 |
N12 |
N9 |
181.1 |
180.0 |
| N12 |
C10 |
N9 |
C8 |
189.7 |
175.4 |
| N12 |
C10 |
N9 |
H6 |
9.7 |
355.4 |
| C21 |
C19 |
C18 |
H1 |
180.0 |
180.2 |
| N12 |
C10 |
O11 |
N9 |
178.8 |
180.0 |
| O11 |
C10 |
N12 |
H5 |
182.2 |
179.9 |
| O11 |
C10 |
N9 |
C8 |
8.6 |
355.4 |
| O11 |
C10 |
N9 |
H6 |
188.6 |
175.4 |
| N9 |
C10 |
N12 |
H5 |
1.0 |
359.9 |
| C10 |
N9 |
C8 |
C7 |
352.7 |
35.0 |
| C10 |
N9 |
C8 |
C23 |
171.7 |
214.7 |
| C8 |
N9 |
C10 |
H6 |
180.0 |
180.0 |
| C19 |
C18 |
C17 |
H1 |
180.0 |
180.0 |
| C17 |
C18 |
C19 |
H1 |
180.0 |
180.0 |
| C10 |
N9 |
C8 |
H6 |
180.0 |
180.0 |
| C7 |
C8 |
N9 |
C23 |
180.9 |
180.2 |
| N9 |
C8 |
C7 |
C6 |
179.3 |
180.0 |
| N9 |
C8 |
C7 |
H7 |
359.3 |
359.9 |
| N9 |
C8 |
C23 |
N24 |
180.6 |
180.0 |
| N9 |
C8 |
C23 |
H9 |
0.6 |
360.0 |
| N9 |
C8 |
C7 |
C23 |
179.0 |
179.8 |
| C7 |
C8 |
N9 |
H6 |
172.7 |
215.0 |
| C7 |
C8 |
C23 |
N24 |
359.8 |
359.8 |
| C7 |
C8 |
C23 |
H9 |
179.8 |
179.7 |
| C8 |
C7 |
C6 |
C5 |
359.7 |
0.0 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
| C8 |
C7 |
C6 |
H8 |
179.7 |
180.0 |
| N9 |
C8 |
C23 |
C7 |
180.8 |
180.2 |
| C23 |
C8 |
N9 |
H6 |
351.7 |
34.7 |
| C23 |
C8 |
C7 |
C6 |
0.3 |
0.2 |
| C23 |
C8 |
C7 |
H7 |
180.3 |
180.2 |
| C8 |
C23 |
N24 |
C5 |
0.1 |
359.9 |
| N24 |
C23 |
C8 |
H9 |
180.0 |
180.1 |
| C6 |
C7 |
C8 |
C23 |
0.3 |
0.2 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
| C7 |
C6 |
C5 |
N24 |
0.3 |
359.7 |
| C7 |
C6 |
C5 |
S1 |
180.3 |
180.0 |
| C5 |
C6 |
C7 |
H8 |
180.0 |
180.1 |
| C8 |
C23 |
N24 |
H9 |
180.0 |
179.9 |
| C6 |
C5 |
N24 |
C23 |
359.8 |
0.4 |
| C23 |
N24 |
C5 |
S1 |
179.8 |
180.0 |
| C5 |
C6 |
C7 |
H7 |
179.7 |
180.1 |
| C7 |
C6 |
C5 |
H8 |
180.0 |
179.9 |
| C23 |
N24 |
C5 |
C6 |
359.8 |
0.4 |
| N24 |
C5 |
C6 |
S1 |
180.0 |
179.7 |
| C6 |
C5 |
S1 |
O2 |
243.8 |
263.5 |
| C5 |
N24 |
C23 |
H9 |
180.1 |
180.0 |
| C6 |
C5 |
N24 |
S1 |
180.0 |
180.3 |
| N24 |
C5 |
C6 |
H8 |
180.2 |
179.8 |
| N24 |
C5 |
S1 |
O2 |
63.8 |
83.8 |
| C6 |
C5 |
S1 |
N24 |
180.0 |
179.7 |
| S1 |
C5 |
C6 |
H8 |
0.2 |
0.1 |
| H2 |
C17 |
C18 |
H1 |
0.0 |
0.1 |
| H4 |
C22 |
C21 |
H3 |
0.2 |
0.3 |
| S13 |
N12 |
H5 |
C10 |
180.0 |
179.9 |
| H5 |
N12 |
C10 |
N9 |
1.0 |
359.9 |
| C10 |
N9 |
H6 |
C8 |
180.0 |
180.0 |
| H6 |
N9 |
C8 |
C7 |
172.7 |
215.0 |
| H6 |
N9 |
C8 |
C23 |
351.7 |
34.7 |
| H7 |
C7 |
C8 |
C23 |
180.3 |
180.2 |
| C8 |
C7 |
H7 |
C6 |
180.0 |
180.0 |
| H7 |
C7 |
C6 |
C5 |
179.7 |
180.1 |
| H7 |
C7 |
C6 |
H8 |
359.7 |
360.0 |
| C7 |
C6 |
H8 |
C5 |
180.0 |
180.1 |
| H8 |
C6 |
C7 |
H7 |
359.7 |
360.0 |
| H8 |
C6 |
C5 |
N24 |
180.2 |
179.8 |
| H8 |
C6 |
C5 |
S1 |
0.2 |
0.1 |
| C8 |
C23 |
H9 |
N24 |
180.0 |
180.1 |
| H9 |
C23 |
N24 |
C5 |
180.1 |
180.0 |