PDB Chemical Component MAN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MAN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.543 |
1.530 |
C1 |
O1 |
1.386 |
1.428 |
C1 |
O5 |
1.455 |
1.426 |
C1 |
H1 |
1.115 |
1.090 |
C2 |
C3 |
1.530 |
1.532 |
C2 |
O2 |
1.422 |
1.428 |
C2 |
H2 |
1.115 |
1.089 |
C3 |
C4 |
1.534 |
1.533 |
C3 |
O3 |
1.419 |
1.430 |
C3 |
H3 |
1.115 |
1.090 |
C4 |
C5 |
1.529 |
1.530 |
C4 |
O4 |
1.422 |
1.429 |
C4 |
H4 |
1.114 |
1.090 |
C5 |
C6 |
1.534 |
1.530 |
C5 |
O5 |
1.456 |
1.425 |
C5 |
H5 |
1.115 |
1.090 |
C6 |
O6 |
1.424 |
1.428 |
C6 |
H61 |
1.114 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
O1 |
HO1 |
0.950 |
0.966 |
O2 |
HO2 |
0.949 |
0.967 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
HO4 |
0.950 |
0.966 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for MAN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
112.6 |
109.4 |
C2 |
C1 |
O5 |
114.5 |
109.8 |
C2 |
C1 |
H1 |
104.0 |
109.4 |
C1 |
C2 |
C3 |
112.7 |
109.0 |
C1 |
C2 |
O2 |
109.6 |
109.5 |
C1 |
C2 |
H2 |
107.1 |
109.6 |
O1 |
C1 |
O5 |
110.9 |
109.4 |
O1 |
C1 |
H1 |
108.2 |
109.4 |
C1 |
O1 |
HO1 |
112.6 |
106.8 |
O5 |
C1 |
H1 |
106.0 |
109.5 |
C1 |
O5 |
C5 |
115.6 |
107.6 |
C3 |
C2 |
O2 |
109.5 |
109.6 |
C3 |
C2 |
H2 |
107.2 |
109.6 |
C2 |
C3 |
C4 |
109.7 |
108.7 |
C2 |
C3 |
O3 |
109.3 |
109.6 |
C2 |
C3 |
H3 |
109.8 |
109.6 |
O2 |
C2 |
H2 |
110.6 |
109.5 |
C2 |
O2 |
HO2 |
109.6 |
106.8 |
C4 |
C3 |
O3 |
110.3 |
109.7 |
C4 |
C3 |
H3 |
108.7 |
109.7 |
C3 |
C4 |
C5 |
108.9 |
109.0 |
C3 |
C4 |
O4 |
110.8 |
109.6 |
C3 |
C4 |
H4 |
109.1 |
109.5 |
O3 |
C3 |
H3 |
109.1 |
109.6 |
C3 |
O3 |
HO3 |
109.3 |
106.8 |
C5 |
C4 |
O4 |
109.8 |
109.7 |
C5 |
C4 |
H4 |
110.1 |
109.6 |
C4 |
C5 |
C6 |
111.0 |
109.4 |
C4 |
C5 |
O5 |
110.1 |
109.8 |
C4 |
C5 |
H5 |
107.3 |
109.4 |
O4 |
C4 |
H4 |
108.2 |
109.5 |
C4 |
O4 |
HO4 |
110.8 |
106.9 |
C6 |
C5 |
O5 |
107.3 |
109.4 |
C6 |
C5 |
H5 |
110.2 |
109.4 |
C5 |
C6 |
O6 |
112.3 |
109.5 |
C5 |
C6 |
H61 |
111.2 |
109.4 |
C5 |
C6 |
H62 |
111.2 |
109.5 |
O5 |
C5 |
H5 |
111.0 |
109.4 |
O6 |
C6 |
H61 |
111.1 |
109.5 |
O6 |
C6 |
H62 |
111.1 |
109.5 |
C6 |
O6 |
HO6 |
112.4 |
106.9 |
H61 |
C6 |
H62 |
99.2 |
109.4 |
Torsion Angles for MAN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
232.1 |
239.9 |
O1 |
C1 |
C2 |
H1 |
116.9 |
119.8 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.4 |
O5 |
C1 |
C2 |
H1 |
244.8 |
239.8 |
C2 |
C1 |
O5 |
C5 |
314.5 |
292.4 |
C3 |
C2 |
C1 |
O2 |
122.3 |
119.9 |
C3 |
C2 |
C1 |
H2 |
242.3 |
240.1 |
C1 |
C2 |
C3 |
C4 |
310.0 |
306.3 |
C1 |
C2 |
C3 |
O3 |
189.0 |
186.4 |
C1 |
C2 |
C3 |
H3 |
69.4 |
66.1 |
O2 |
C2 |
C1 |
H2 |
120.0 |
120.2 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
300.0 |
C2 |
C1 |
O1 |
O5 |
129.8 |
120.3 |
C2 |
C1 |
O1 |
H1 |
245.6 |
240.2 |
O1 |
C1 |
C2 |
C3 |
274.6 |
301.2 |
O1 |
C1 |
C2 |
O2 |
152.3 |
181.3 |
O1 |
C1 |
C2 |
H2 |
32.3 |
61.1 |
O5 |
C1 |
O1 |
H1 |
115.8 |
119.9 |
O1 |
C1 |
O5 |
C5 |
83.3 |
52.5 |
C2 |
C1 |
O5 |
O1 |
231.2 |
240.0 |
C2 |
C1 |
O5 |
H1 |
114.0 |
120.2 |
O5 |
C1 |
C2 |
C3 |
42.5 |
61.2 |
O5 |
C1 |
C2 |
O2 |
280.2 |
301.3 |
O5 |
C1 |
C2 |
H2 |
160.2 |
181.1 |
O1 |
C1 |
O5 |
H1 |
242.8 |
240.2 |
O5 |
C1 |
O1 |
HO1 |
50.2 |
60.0 |
C4 |
C5 |
O5 |
C1 |
55.2 |
67.6 |
C6 |
C5 |
O5 |
C1 |
176.1 |
187.7 |
C1 |
O5 |
C5 |
H5 |
296.5 |
307.5 |
C2 |
C1 |
H1 |
O1 |
119.9 |
119.8 |
C2 |
C1 |
H1 |
O5 |
238.9 |
239.6 |
H1 |
C1 |
C2 |
C3 |
157.6 |
181.4 |
H1 |
C1 |
C2 |
O2 |
35.4 |
61.5 |
H1 |
C1 |
C2 |
H2 |
275.4 |
301.3 |
O1 |
C1 |
H1 |
O5 |
118.9 |
119.8 |
H1 |
C1 |
O1 |
HO1 |
294.3 |
300.2 |
H1 |
C1 |
O5 |
C5 |
200.5 |
172.3 |
C3 |
C2 |
C1 |
O1 |
274.6 |
301.2 |
C3 |
C2 |
C1 |
O5 |
42.5 |
61.2 |
C3 |
C2 |
C1 |
H1 |
157.6 |
181.4 |
C1 |
C2 |
C3 |
O2 |
237.7 |
240.2 |
C1 |
C2 |
C3 |
H2 |
117.7 |
119.9 |
O2 |
C2 |
C3 |
H2 |
240.0 |
239.8 |
C3 |
C2 |
O2 |
HO2 |
55.8 |
180.5 |
C4 |
C3 |
C2 |
O3 |
121.0 |
119.9 |
C4 |
C3 |
C2 |
H3 |
240.7 |
240.2 |
C2 |
C3 |
C4 |
C5 |
59.7 |
53.8 |
C2 |
C3 |
C4 |
O4 |
180.6 |
173.7 |
C2 |
C3 |
C4 |
H4 |
299.6 |
293.9 |
O3 |
C3 |
C2 |
H3 |
119.6 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
O2 |
C2 |
C1 |
O1 |
152.3 |
181.3 |
O2 |
C2 |
C1 |
O5 |
280.2 |
301.3 |
O2 |
C2 |
C1 |
H1 |
35.4 |
61.5 |
C1 |
C2 |
O2 |
C3 |
124.2 |
119.5 |
C1 |
C2 |
O2 |
H2 |
242.1 |
239.7 |
C3 |
C2 |
O2 |
H2 |
118.0 |
120.2 |
O2 |
C2 |
C3 |
C4 |
72.4 |
66.1 |
O2 |
C2 |
C3 |
O3 |
311.3 |
306.2 |
O2 |
C2 |
C3 |
H3 |
191.7 |
185.9 |
H2 |
C2 |
C1 |
O1 |
32.3 |
61.1 |
H2 |
C2 |
C1 |
O5 |
160.2 |
181.1 |
H2 |
C2 |
C1 |
H1 |
275.4 |
301.3 |
C1 |
C2 |
H2 |
C3 |
238.7 |
240.5 |
C1 |
C2 |
H2 |
O2 |
119.4 |
120.2 |
C3 |
C2 |
H2 |
O2 |
240.6 |
239.7 |
H2 |
C2 |
C3 |
C4 |
192.4 |
186.3 |
H2 |
C2 |
C3 |
O3 |
71.3 |
66.5 |
H2 |
C2 |
C3 |
H3 |
311.7 |
306.2 |
H2 |
C2 |
O2 |
HO2 |
297.9 |
60.2 |
C4 |
C3 |
C2 |
O2 |
72.4 |
66.1 |
C4 |
C3 |
C2 |
H2 |
192.4 |
186.3 |
C2 |
C3 |
C4 |
O3 |
239.6 |
240.2 |
C2 |
C3 |
C4 |
H3 |
120.0 |
119.8 |
O3 |
C3 |
C4 |
H3 |
240.4 |
239.6 |
C4 |
C3 |
O3 |
HO3 |
59.4 |
180.8 |
C5 |
C4 |
C3 |
O4 |
239.1 |
240.0 |
C5 |
C4 |
C3 |
H4 |
120.2 |
119.9 |
C3 |
C4 |
C5 |
C6 |
179.5 |
178.6 |
C3 |
C4 |
C5 |
O5 |
298.2 |
298.7 |
C3 |
C4 |
C5 |
H5 |
59.1 |
58.8 |
O4 |
C4 |
C3 |
H4 |
241.0 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
180.1 |
60.0 |
O3 |
C3 |
C2 |
O2 |
311.3 |
306.2 |
O3 |
C3 |
C2 |
H2 |
71.3 |
66.5 |
C2 |
C3 |
O3 |
C4 |
120.6 |
119.2 |
C2 |
C3 |
O3 |
H3 |
240.0 |
239.7 |
C4 |
C3 |
O3 |
H3 |
119.4 |
120.4 |
O3 |
C3 |
C4 |
C5 |
180.1 |
173.6 |
O3 |
C3 |
C4 |
O4 |
301.0 |
293.5 |
O3 |
C3 |
C4 |
H4 |
60.0 |
53.7 |
H3 |
C3 |
C2 |
O2 |
191.7 |
185.9 |
H3 |
C3 |
C2 |
H2 |
311.7 |
306.2 |
C2 |
C3 |
H3 |
C4 |
240.1 |
240.8 |
C2 |
C3 |
H3 |
O3 |
119.7 |
120.3 |
C4 |
C3 |
H3 |
O3 |
239.7 |
239.5 |
H3 |
C3 |
C4 |
C5 |
299.7 |
293.9 |
H3 |
C3 |
C4 |
O4 |
60.6 |
53.9 |
H3 |
C3 |
C4 |
H4 |
179.6 |
174.1 |
H3 |
C3 |
O3 |
HO3 |
300.0 |
60.4 |
C1 |
O5 |
C5 |
C4 |
55.2 |
67.6 |
C5 |
C4 |
C3 |
O3 |
180.1 |
173.6 |
C5 |
C4 |
C3 |
H3 |
299.7 |
293.9 |
C3 |
C4 |
C5 |
O4 |
121.5 |
119.9 |
C3 |
C4 |
C5 |
H4 |
240.5 |
240.2 |
O4 |
C4 |
C5 |
H4 |
119.0 |
120.3 |
C5 |
C4 |
O4 |
HO4 |
300.4 |
179.6 |
C6 |
C5 |
C4 |
O5 |
241.3 |
239.9 |
C6 |
C5 |
C4 |
H5 |
120.4 |
119.8 |
C4 |
C5 |
C6 |
O6 |
218.1 |
180.2 |
C4 |
C5 |
C6 |
H61 |
343.3 |
60.2 |
C4 |
C5 |
C6 |
H62 |
92.9 |
300.3 |
O5 |
C5 |
C4 |
H5 |
239.1 |
239.9 |
O4 |
C4 |
C3 |
O3 |
301.0 |
293.5 |
O4 |
C4 |
C3 |
H3 |
60.6 |
53.9 |
C3 |
C4 |
O4 |
C5 |
239.6 |
240.5 |
C3 |
C4 |
O4 |
H4 |
119.5 |
120.1 |
C5 |
C4 |
O4 |
H4 |
239.9 |
239.7 |
O4 |
C4 |
C5 |
C6 |
58.0 |
58.7 |
O4 |
C4 |
C5 |
O5 |
176.6 |
178.8 |
O4 |
C4 |
C5 |
H5 |
297.6 |
298.9 |
H4 |
C4 |
C3 |
O3 |
60.0 |
53.7 |
H4 |
C4 |
C3 |
H3 |
179.6 |
174.1 |
C3 |
C4 |
H4 |
C5 |
119.4 |
119.5 |
C3 |
C4 |
H4 |
O4 |
239.4 |
239.8 |
C5 |
C4 |
H4 |
O4 |
119.9 |
120.3 |
H4 |
C4 |
C5 |
C6 |
299.0 |
298.4 |
H4 |
C4 |
C5 |
O5 |
57.7 |
58.5 |
H4 |
C4 |
C5 |
H5 |
178.6 |
178.6 |
H4 |
C4 |
O4 |
HO4 |
60.5 |
299.9 |
C1 |
O5 |
C5 |
C6 |
176.1 |
187.7 |
C6 |
C5 |
C4 |
O4 |
58.0 |
58.7 |
C6 |
C5 |
C4 |
H4 |
299.0 |
298.4 |
C4 |
C5 |
C6 |
O5 |
120.4 |
120.4 |
C4 |
C5 |
C6 |
H5 |
241.3 |
240.2 |
O5 |
C5 |
C6 |
H5 |
120.9 |
119.8 |
O6 |
C6 |
C5 |
H61 |
234.8 |
120.0 |
O6 |
C6 |
C5 |
H62 |
125.2 |
239.9 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.1 |
H61 |
C6 |
C5 |
H62 |
250.5 |
119.9 |
C5 |
O5 |
C1 |
H1 |
200.5 |
172.3 |
O5 |
C5 |
C4 |
O4 |
176.6 |
178.8 |
O5 |
C5 |
C4 |
H4 |
57.7 |
58.5 |
C4 |
C5 |
O5 |
C6 |
239.1 |
239.9 |
C4 |
C5 |
O5 |
H5 |
118.7 |
120.1 |
C6 |
C5 |
O5 |
H5 |
239.6 |
240.2 |
O5 |
C5 |
C6 |
O6 |
97.8 |
59.8 |
O5 |
C5 |
C6 |
H61 |
223.0 |
299.9 |
O5 |
C5 |
C6 |
H62 |
332.5 |
179.9 |
H5 |
C5 |
C4 |
O4 |
297.6 |
298.9 |
H5 |
C5 |
C4 |
H4 |
178.6 |
178.6 |
C4 |
C5 |
H5 |
C6 |
120.9 |
119.8 |
C4 |
C5 |
H5 |
O5 |
239.6 |
239.7 |
C6 |
C5 |
H5 |
O5 |
118.7 |
119.8 |
H5 |
C5 |
C6 |
O6 |
336.8 |
300.0 |
H5 |
C5 |
C6 |
H61 |
102.1 |
180.0 |
H5 |
C5 |
C6 |
H62 |
211.6 |
60.1 |
O6 |
C6 |
C5 |
O5 |
97.8 |
59.8 |
O6 |
C6 |
C5 |
H5 |
336.8 |
300.0 |
C5 |
C6 |
O6 |
H61 |
125.3 |
240.1 |
C5 |
C6 |
O6 |
H62 |
234.7 |
120.1 |
H61 |
C6 |
O6 |
H62 |
109.5 |
240.0 |
H61 |
C6 |
C5 |
O5 |
223.0 |
299.9 |
H61 |
C6 |
C5 |
H5 |
102.1 |
180.0 |
C5 |
C6 |
H61 |
O6 |
234.1 |
120.0 |
C5 |
C6 |
H61 |
H62 |
117.1 |
240.0 |
O6 |
C6 |
H61 |
H62 |
243.0 |
120.0 |
H61 |
C6 |
O6 |
HO6 |
54.7 |
300.0 |
H62 |
C6 |
C5 |
O5 |
332.5 |
179.9 |
H62 |
C6 |
C5 |
H5 |
211.6 |
60.1 |
C5 |
C6 |
H62 |
O6 |
125.9 |
239.9 |
C5 |
C6 |
H62 |
H61 |
242.9 |
119.9 |
O6 |
C6 |
H62 |
H61 |
117.0 |
240.0 |
H62 |
C6 |
O6 |
HO6 |
305.2 |
60.0 |
HO1 |
O1 |
C1 |
O5 |
50.2 |
60.0 |
HO1 |
O1 |
C1 |
H1 |
294.3 |
300.2 |
HO2 |
O2 |
C2 |
H2 |
297.9 |
60.2 |
HO3 |
O3 |
C3 |
H3 |
300.0 |
60.4 |
HO4 |
O4 |
C4 |
H4 |
60.5 |
299.9 |
HO6 |
O6 |
C6 |
H61 |
54.7 |
300.0 |
HO6 |
O6 |
C6 |
H62 |
305.2 |
60.0 |