PDB Chemical Component MAJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MAJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C7 |
C8 |
1.449 |
1.543 |
| C7 |
C6 |
1.477 |
1.514 |
| C8 |
C9 |
1.488 |
1.546 |
| C6 |
C4 |
1.387 |
1.385 |
| C6 |
C5 |
1.417 |
1.383 |
| C4 |
C3 |
1.417 |
1.381 |
| C9 |
C5 |
1.474 |
1.513 |
| C5 |
C1 |
1.423 |
1.385 |
| C3 |
C2 |
1.428 |
1.382 |
| C1 |
C2 |
1.395 |
1.382 |
| C2 |
S1 |
1.788 |
1.762 |
| O2 |
S1 |
1.429 |
1.421 |
| S1 |
O1 |
1.428 |
1.422 |
| S1 |
N1 |
1.570 |
1.656 |
| C1 |
H1 |
1.080 |
1.081 |
| C3 |
H3 |
1.081 |
1.080 |
| C4 |
H4 |
1.080 |
1.080 |
| C7 |
H71 |
1.100 |
1.090 |
| C7 |
H72 |
1.100 |
1.090 |
| C8 |
H81 |
1.101 |
1.091 |
| C8 |
H82 |
1.100 |
1.089 |
| C9 |
H91 |
1.100 |
1.090 |
| C9 |
H92 |
1.100 |
1.090 |
| N1 |
HN11 |
1.000 |
0.970 |
| N1 |
HN12 |
1.000 |
0.970 |
Bond Angles for MAJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C8 |
C9 |
107.1 |
102.3 |
| C8 |
C7 |
H71 |
110.2 |
110.3 |
| C8 |
C7 |
H72 |
110.7 |
110.3 |
| C7 |
C8 |
H81 |
110.2 |
110.8 |
| C7 |
C8 |
H82 |
110.8 |
110.9 |
| C9 |
C8 |
H81 |
110.3 |
111.1 |
| C9 |
C8 |
H82 |
110.8 |
110.6 |
| C8 |
C9 |
H91 |
111.0 |
110.3 |
| C8 |
C9 |
H92 |
112.0 |
110.3 |
| C6 |
C4 |
H4 |
120.2 |
119.9 |
| C4 |
C3 |
H3 |
120.5 |
120.1 |
| C5 |
C1 |
H1 |
120.4 |
119.9 |
| C3 |
C2 |
S1 |
119.7 |
120.1 |
| C1 |
C2 |
S1 |
118.9 |
120.0 |
| C2 |
C1 |
H1 |
120.3 |
119.8 |
| C2 |
S1 |
O1 |
106.1 |
106.4 |
| C2 |
S1 |
N1 |
108.6 |
107.2 |
| O2 |
S1 |
N1 |
107.4 |
106.4 |
| O1 |
S1 |
N1 |
107.7 |
106.4 |
| S1 |
N1 |
HN11 |
109.5 |
120.0 |
| S1 |
N1 |
HN12 |
109.5 |
120.0 |
| H71 |
C7 |
H72 |
107.8 |
110.3 |
| H81 |
C8 |
H82 |
107.7 |
110.9 |
| H91 |
C9 |
H92 |
106.0 |
110.4 |
| HN11 |
N1 |
HN12 |
109.5 |
120.0 |
Torsion Angles for MAJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
C8 |
C7 |
H81 |
240.0 |
241.6 |
| C9 |
C8 |
C7 |
H82 |
120.9 |
118.0 |
| C7 |
C8 |
C9 |
H91 |
137.3 |
267.4 |
| C7 |
C8 |
C9 |
H92 |
255.6 |
145.2 |
| H71 |
C7 |
C8 |
H72 |
240.9 |
122.1 |
| H81 |
C8 |
C7 |
H82 |
240.9 |
236.4 |
| C7 |
C6 |
C4 |
H4 |
360.0 |
0.0 |
| C9 |
C8 |
C7 |
H71 |
102.2 |
214.7 |
| C9 |
C8 |
C7 |
H72 |
221.3 |
92.6 |
| C7 |
C8 |
C9 |
H81 |
120.0 |
118.3 |
| C7 |
C8 |
C9 |
H82 |
239.1 |
241.9 |
| H81 |
C8 |
C9 |
H82 |
119.1 |
123.6 |
| H91 |
C9 |
C8 |
H92 |
241.7 |
122.1 |
| C6 |
C4 |
C3 |
H3 |
180.2 |
180.1 |
| C5 |
C6 |
C4 |
H4 |
179.7 |
179.7 |
| C6 |
C5 |
C1 |
H1 |
179.7 |
179.7 |
| C4 |
C3 |
C2 |
S1 |
179.9 |
180.0 |
| C9 |
C5 |
C1 |
H1 |
0.0 |
0.3 |
| C5 |
C1 |
C2 |
S1 |
180.1 |
180.3 |
| C2 |
C1 |
C5 |
H1 |
180.0 |
179.7 |
| C1 |
C2 |
C3 |
S1 |
179.9 |
179.9 |
| C3 |
C2 |
C1 |
H1 |
180.3 |
180.0 |
| C3 |
C2 |
S1 |
O1 |
136.3 |
23.5 |
| C3 |
C2 |
S1 |
N1 |
251.9 |
270.0 |
| C5 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C3 |
C2 |
C1 |
S1 |
180.1 |
180.1 |
| C1 |
C2 |
S1 |
O1 |
316.4 |
203.6 |
| C1 |
C2 |
S1 |
N1 |
72.0 |
90.1 |
| S1 |
C2 |
C1 |
H1 |
0.2 |
359.9 |
| O2 |
S1 |
C2 |
N1 |
115.7 |
246.4 |
| O1 |
S1 |
C2 |
N1 |
244.4 |
113.5 |
| C2 |
S1 |
N1 |
HN11 |
5.2 |
359.9 |
| C2 |
S1 |
N1 |
HN12 |
125.2 |
180.0 |
| C2 |
S1 |
O2 |
N1 |
243.5 |
114.1 |
| O1 |
S1 |
O2 |
N1 |
123.0 |
237.0 |
| O2 |
S1 |
N1 |
HN11 |
249.7 |
113.5 |
| O2 |
S1 |
N1 |
HN12 |
9.7 |
293.6 |
| C2 |
S1 |
O1 |
N1 |
116.2 |
245.9 |
| O2 |
S1 |
O1 |
N1 |
237.2 |
123.0 |
| O1 |
S1 |
N1 |
HN11 |
119.7 |
246.4 |
| O1 |
S1 |
N1 |
HN12 |
239.8 |
66.5 |
| C2 |
S1 |
N1 |
O1 |
245.5 |
113.5 |
| HN11 |
N1 |
S1 |
HN12 |
240.0 |
179.9 |
| H1 |
C1 |
C2 |
S1 |
0.2 |
359.9 |
| H3 |
C3 |
C2 |
S1 |
359.9 |
0.0 |
| H4 |
C4 |
C3 |
H3 |
0.2 |
360.0 |
| H71 |
C7 |
C8 |
C9 |
102.2 |
214.7 |
| C8 |
C7 |
H71 |
H72 |
120.9 |
237.9 |
| H71 |
C7 |
C8 |
H81 |
222.2 |
333.1 |
| H71 |
C7 |
C8 |
H82 |
341.2 |
96.7 |
| H72 |
C7 |
C8 |
C9 |
221.3 |
92.6 |
| C8 |
C7 |
H72 |
H71 |
239.4 |
122.1 |
| H72 |
C7 |
C8 |
H81 |
341.3 |
211.0 |
| H72 |
C7 |
C8 |
H82 |
100.4 |
334.6 |
| C7 |
C8 |
H81 |
C9 |
241.9 |
247.0 |
| H81 |
C8 |
C7 |
H71 |
222.2 |
333.1 |
| H81 |
C8 |
C7 |
H72 |
341.3 |
211.0 |
| C7 |
C8 |
H81 |
H82 |
120.9 |
123.6 |
| C9 |
C8 |
H81 |
H82 |
239.0 |
236.5 |
| H81 |
C8 |
C9 |
H91 |
17.3 |
149.1 |
| H81 |
C8 |
C9 |
H92 |
135.6 |
27.0 |
| C7 |
C8 |
H82 |
C9 |
118.7 |
112.8 |
| H82 |
C8 |
C7 |
H71 |
341.2 |
96.7 |
| H82 |
C8 |
C7 |
H72 |
100.4 |
334.6 |
| C7 |
C8 |
H82 |
H81 |
239.4 |
236.4 |
| C9 |
C8 |
H82 |
H81 |
120.7 |
123.7 |
| H82 |
C8 |
C9 |
H91 |
258.3 |
25.5 |
| H82 |
C8 |
C9 |
H92 |
16.6 |
263.4 |
| H91 |
C9 |
C8 |
H81 |
17.3 |
149.1 |
| H91 |
C9 |
C8 |
H82 |
258.3 |
25.5 |
| C8 |
C9 |
H91 |
H92 |
121.9 |
237.9 |
| H92 |
C9 |
C8 |
H81 |
135.6 |
27.0 |
| H92 |
C9 |
C8 |
H82 |
16.6 |
263.4 |
| C8 |
C9 |
H92 |
H91 |
238.8 |
122.1 |
| S1 |
N1 |
HN11 |
HN12 |
120.0 |
180.1 |
| S1 |
N1 |
HN12 |
HN11 |
240.0 |
179.9 |