PDB Chemical Component M9T

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M9T

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	C1	1.508	1.507
C1	C2	1.395	1.382
C1	C6	1.407	1.389
N1	C8	1.343	1.326
N1	C7	1.343	1.325
N	C6	1.420	1.401
N	C7	1.365	1.387
C2	C3	1.391	1.387
C6	C5	1.401	1.388
C8	C9	1.391	1.384
C7	N2	1.342	1.325
C3	O2	1.374	1.360
C3	C4	1.390	1.387
C5	C4	1.385	1.381
O2	C19	1.430	1.429
C9	C10	1.400	1.402
C9	N4	1.384	1.393
N2	C10	1.338	1.326
C10	N3	1.384	1.382
C12	N4	1.461	1.465
N4	C11	1.385	1.347
N3	C11	1.378	1.346
N3	C13	1.479	1.465
C11	O	1.217	1.217
C14	C13	1.534	1.530
C14	C15	1.532	1.530
C13	C18	1.529	1.530
C18	C17	1.529	1.530
C15	C16	1.519	1.530
C16	C17	1.514	1.530
C16	O1	1.427	1.429
C2	H1	1.080	1.080
C8	H2	1.080	1.079
C12	H3	1.100	1.090
C12	H4	1.100	1.090
C12	H5	1.100	1.090
C13	H6	1.100	1.090
C14	H7	1.100	1.090
C14	H8	1.100	1.090
C15	H9	1.100	1.090
C15	H10	1.100	1.090
C16	H11	1.099	1.089
C19	H12	1.100	1.090
C19	H13	1.099	1.091
C19	H14	1.099	1.090
C18	H15	1.100	1.090
C18	H16	1.100	1.090
C17	H17	1.100	1.091
C17	H18	1.100	1.089
O1	H19	0.950	0.967
N	H20	1.000	0.970
C	H21	1.100	1.090
C	H22	1.100	1.090
C	H23	1.100	1.090
C5	H24	1.080	1.080
C4	H25	1.080	1.080

Bond Angles for M9T

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	118.3	119.9
C1	C2	C3	121.0	120.0
C1	C2	H1	119.5	119.9
C1	C6	N	118.7	120.0
C1	C6	C5	120.5	120.0
N1	C8	H2	118.2	120.6
N1	C7	N2	126.4	122.0
N	C6	C5	120.7	120.0
C6	N	H20	116.2	120.0
C2	C3	O2	117.2	120.0
C2	C3	C4	120.3	120.1
C3	C2	H1	119.5	120.0
C6	C5	C4	120.2	120.0
C6	C5	H24	119.9	120.0
C8	C9	C10	114.8	118.7
C8	C9	N4	138.3	134.5
C9	C8	H2	118.2	120.6
C7	N2	C10	115.8	120.4
C4	C3	O2	122.5	120.0
C3	O2	C19	118.0	117.0
C3	C4	C5	119.7	120.0
C3	C4	H25	120.1	120.0
C4	C5	H24	119.9	120.0
C5	C4	H25	120.1	120.0
O2	C19	H12	109.5	109.4
O2	C19	H13	109.5	109.5
O2	C19	H14	109.5	109.5
C10	C9	N4	106.9	106.8
C9	C10	N3	107.4	106.8
C9	N4	C12	125.9	125.9
C9	N4	C11	109.6	108.1
C10	N3	C11	109.5	108.7
C10	N3	C13	126.2	125.6
N4	C12	H3	109.5	109.5
N4	C12	H4	109.5	109.5
N4	C12	H5	109.5	109.5
N3	C13	C18	112.0	109.5
N3	C13	H6	106.8	109.5
C14	C13	C18	112.8	109.5
C14	C13	H6	106.2	109.5
C14	C15	C16	111.4	109.5
C15	C14	H7	109.1	109.5
C15	C14	H8	109.1	109.5
C14	C15	H9	109.0	109.5
C14	C15	H10	109.0	109.5
C13	C18	C17	110.2	109.5
C18	C13	H6	106.3	109.5
C13	C18	H15	109.3	109.5
C13	C18	H16	109.3	109.5
C16	C17	C18	111.4	109.5
C17	C18	H15	109.3	109.4
C17	C18	H16	109.3	109.5
C18	C17	H17	109.0	109.4
C18	C17	H18	109.0	109.5
C15	C16	C17	110.3	109.4
C15	C16	O1	109.8	109.4
C16	C15	H9	109.0	109.5
C16	C15	H10	109.0	109.5
C15	C16	H11	108.6	109.5
C17	C16	O1	109.7	109.5
C17	C16	H11	108.6	109.5
C16	C17	H17	109.0	109.5
C16	C17	H18	109.0	109.5
O1	C16	H11	109.8	109.5
C16	O1	H19	109.5	114.0
H3	C12	H4	109.5	109.4
H3	C12	H5	109.5	109.5
H4	C12	H5	109.5	109.5
H7	C14	H8	109.5	109.5
H9	C15	H10	109.5	109.5
H12	C19	H13	109.5	109.5
H12	C19	H14	109.5	109.5
H13	C19	H14	109.5	109.5
H15	C18	H16	109.5	109.5
H17	C17	H18	109.4	109.5
H21	C	H22	109.5	109.5
H21	C	H23	109.5	109.5
H22	C	H23	109.5	109.5

Torsion Angles for M9T

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C	C1	C2	H1	0.2	359.7
C	C1	C6	C5	180.3	180.3
C2	C1	C6	N	180.0	180.0
C2	C1	C6	C5	0.0	360.0
C1	C2	C3	O2	179.8	180.0
C1	C2	C3	C4	359.4	0.0
C3	C2	C1	H1	180.0	180.0
C6	C1	C2	C3	0.4	0.0
C6	C1	C2	H1	180.4	180.0
N	C6	C1	C5	179.9	180.0
C1	C6	N	H20	313.3	32.5
C1	C6	C5	C4	359.7	360.0
C1	C6	C5	H24	179.8	180.0
C8	N1	C7	N2	0.1	360.0
C9	C8	N1	H2	180.0	180.0
N1	C7	N2	C10	0.1	0.0
C1	C6	N	C5	180.1	180.0
N	C6	C5	C4	179.8	180.0
N	C6	C5	H24	359.8	360.0
C1	C6	N	C7	133.3	212.5
C3	C2	C1	C6	0.4	0.0
C1	C2	C3	H1	180.0	180.0
C4	C3	C2	O2	179.6	180.0
C2	C3	O2	C19	190.7	180.0
C2	C3	C4	C5	0.4	359.9
C2	C3	C4	H25	180.4	180.0
C1	C6	C5	N	179.9	180.0
C5	C6	N	H20	133.2	212.5
C3	C4	C5	C6	0.0	0.1
C4	C5	C6	H24	180.0	180.0
C6	C5	C4	H25	180.0	180.0
N1	C8	C9	H2	180.0	180.0
C10	C9	C8	N4	179.2	180.1
C8	C9	C10	N3	180.3	179.9
C8	C9	N4	C12	358.8	0.1
C8	C9	N4	C11	179.9	180.1
C2	C3	O2	C4	179.6	180.0
O2	C3	C2	H1	359.8	0.1
O2	C3	C4	C5	179.9	179.9
O2	C3	C4	H25	360.0	360.0
C3	O2	C19	H12	180.0	60.0
C3	O2	C19	H13	300.0	180.0
C3	O2	C19	H14	60.0	300.0
C2	C3	C4	O2	180.5	180.0
C4	C3	C2	H1	179.4	180.0
C6	C5	C4	C3	0.0	0.1
C4	C3	O2	C19	11.2	360.0
C3	C4	C5	H24	180.0	180.0
C5	C4	C3	H25	180.0	180.0
C6	C5	C4	H24	180.0	180.0
C5	C4	C3	O2	179.9	179.9
C3	C4	C5	H25	180.0	180.0
H12	C19	O2	H13	240.0	240.0
H12	C19	O2	H14	120.0	120.0
H13	C19	O2	H14	240.0	240.0
C8	C9	C10	N4	180.6	179.9
C10	C9	C8	H2	179.9	180.0
C7	N2	C10	C9	359.6	360.0
C10	C9	N4	C12	179.6	180.0
C10	C9	N4	C11	0.7	360.0
C9	C10	N3	C11	359.8	0.0
C9	C10	N3	C13	195.5	179.9
C8	C9	N4	C10	179.2	180.1
N4	C9	C8	H2	0.7	359.9
N4	C9	C10	N3	359.7	0.0
C9	N4	C12	H3	180.0	90.0
C9	N4	C12	H4	300.0	210.0
C9	N4	C12	H5	60.0	330.0
C7	N2	C10	N3	179.7	180.1
N3	C10	C9	N4	359.7	0.0
C10	N3	C13	C18	63.2	240.0
C10	N3	C13	H6	179.1	0.1
C9	N4	C12	C11	181.2	180.0
H3	C12	N4	H4	240.0	240.0
H3	C12	N4	H5	120.0	120.0
H4	C12	N4	H5	240.0	240.0
C9	N4	C11	C12	179.0	180.0
C10	N3	C11	N4	0.6	360.0
C10	N3	C11	C13	195.0	179.9
C10	N3	C13	C11	162.4	180.1
C14	C13	N3	C18	231.9	240.0
C14	C13	N3	H6	116.0	120.0
N3	C13	C18	C17	179.1	180.0
C18	C13	N3	H6	244.1	240.0
N3	C13	C18	H15	299.2	300.0
N3	C13	C18	H16	58.9	60.0
C9	N4	C11	O	179.1	180.0
C10	N3	C11	O	180.7	180.0
C10	N3	C13	C14	295.1	120.1
N3	C13	C14	C18	127.6	120.0
N3	C13	C14	H6	243.6	240.0
C14	C13	C18	C17	306.8	300.0
C18	C13	C14	H6	116.0	120.0
C14	C13	C18	H15	67.0	59.9
C14	C13	C18	H16	186.7	180.0
C15	C14	C13	C18	52.4	60.0
C15	C14	C13	H6	296.4	300.0
C14	C15	C16	C17	57.7	60.0
C14	C15	C16	O1	178.7	180.0
C16	C15	C14	H9	239.7	240.0
C16	C15	C14	H10	120.3	120.0
C14	C15	C16	H11	298.7	300.0
H7	C14	C15	H8	119.6	120.0
H9	C15	C14	H10	240.6	240.0
N3	C13	C18	H6	116.3	120.0
C14	C13	C18	H6	244.0	240.0
C16	C17	C18	C13	56.3	60.0
C17	C18	C13	H15	239.9	240.1
C17	C18	C13	H16	120.1	120.0
C13	C18	C17	H17	176.6	300.0
C13	C18	C17	H18	296.0	180.0
H15	C18	C13	H16	240.2	239.9
C17	C18	C13	H6	62.8	60.0
C13	C18	C17	H15	120.1	120.0
C13	C18	C17	H16	239.9	240.0
C15	C16	C17	C18	301.0	300.0
C18	C17	C16	O1	180.0	180.1
C18	C17	C16	H11	59.9	60.0
C16	C17	C18	H17	239.7	120.0
C16	C17	C18	H18	120.3	240.0
H15	C18	C17	H16	119.8	120.0
H17	C17	C18	H18	240.6	120.0
C16	C15	C14	H7	185.6	180.0
C16	C15	C14	H8	66.1	60.0
C14	C15	C16	H9	120.3	120.0
C14	C15	C16	H10	239.7	240.0
C17	C16	C15	O1	239.0	240.0
C17	C16	C15	H11	119.0	120.0
C15	C16	C17	H17	180.7	60.0
C15	C16	C17	H18	61.3	180.0
O1	C16	C15	H11	239.9	240.0
C15	C16	O1	H19	180.0	180.0
H9	C15	C16	H10	119.4	120.0
C13	C18	C17	C16	56.3	60.0
C16	C17	C18	H15	296.2	300.0
C16	C17	C18	H16	176.4	180.0
C18	C17	C16	H17	120.3	240.0
C18	C17	C16	H18	239.7	120.0
C15	C16	C17	O1	121.0	119.9
C17	C16	C15	H9	297.4	300.0
C17	C16	C15	H10	178.0	180.0
C15	C16	C17	H11	241.1	240.0
O1	C16	C17	H11	120.1	120.0
C17	C16	O1	H19	301.3	299.9
H17	C17	C16	H18	119.4	240.0
O1	C16	C17	C18	180.0	180.1
C15	C16	O1	C17	238.6	240.1
O1	C16	C15	H9	58.4	59.9
O1	C16	C15	H10	299.0	300.0
C15	C16	O1	H11	119.3	120.0
C17	C16	O1	H11	240.7	240.0
O1	C16	C17	H17	59.7	300.0
O1	C16	C17	H18	300.3	60.0
H1	C2	C1	C6	180.4	180.0
C1	C2	H1	C3	180.0	180.0
H1	C2	C3	O2	359.8	0.1
H1	C2	C3	C4	179.4	180.0
H2	C8	C9	C10	179.9	180.0
H2	C8	C9	N4	0.7	359.9
N4	C12	H3	H4	120.0	120.0
N4	C12	H3	H5	240.0	240.0
H4	C12	H3	H5	120.0	120.0
N4	C12	H4	H3	240.0	240.0
N4	C12	H4	H5	120.0	120.0
H3	C12	H4	H5	240.0	240.0
N4	C12	H5	H3	120.0	120.0
N4	C12	H5	H4	240.0	240.0
H3	C12	H5	H4	120.0	120.0
N3	C13	H6	C18	240.3	240.0
C14	C13	H6	C18	120.4	120.0
H6	C13	C18	C17	62.8	60.0
H6	C13	C18	H15	182.9	179.9
H6	C13	C18	H16	302.7	300.0
H7	C14	C13	C18	172.6	180.0
H7	C14	C13	H6	56.6	60.0
H7	C14	C15	C16	185.6	180.0
C15	C14	H7	H8	240.7	240.0
H7	C14	C15	H9	305.9	300.0
H7	C14	C15	H10	65.4	60.0
H8	C14	C13	C18	292.1	300.0
H8	C14	C13	H6	176.1	180.0
H8	C14	C15	C16	66.1	60.0
C15	C14	H8	H7	119.3	120.0
H8	C14	C15	H9	186.4	180.0
H8	C14	C15	H10	305.8	300.0
C14	C15	H9	C16	238.3	240.0
H9	C15	C14	H7	305.9	300.0
H9	C15	C14	H8	186.4	180.0
C14	C15	H9	H10	119.1	120.0
H9	C15	C16	C17	297.4	300.0
H9	C15	C16	O1	58.4	59.9
C16	C15	H9	H10	240.9	240.0
H9	C15	C16	H11	178.5	180.0
C14	C15	H10	C16	121.7	120.0
H10	C15	C14	H7	65.4	60.0
H10	C15	C14	H8	305.8	300.0
C14	C15	H10	H9	240.9	240.0
H10	C15	C16	C17	178.0	180.0
H10	C15	C16	O1	299.0	300.0
C16	C15	H10	H9	119.2	120.0
H10	C15	C16	H11	59.0	60.0
H11	C16	C17	C18	59.9	60.0
C15	C16	H11	C17	120.0	120.0
C15	C16	H11	O1	240.0	240.0
H11	C16	C15	H9	178.5	180.0
H11	C16	C15	H10	59.0	60.0
C17	C16	H11	O1	120.0	120.0
H11	C16	C17	H17	299.6	180.0
H11	C16	C17	H18	180.3	300.0
H11	C16	O1	H19	60.7	59.9
O2	C19	H12	H13	120.0	120.0
O2	C19	H12	H14	240.0	240.0
H13	C19	H12	H14	120.0	120.0
O2	C19	H13	H12	240.0	240.1
O2	C19	H13	H14	120.0	120.0
H12	C19	H13	H14	240.0	240.0
O2	C19	H14	H12	120.0	120.0
O2	C19	H14	H13	240.0	240.0
H12	C19	H14	H13	120.0	120.0
C13	C18	H15	C17	239.3	240.0
H15	C18	C13	H6	182.9	179.9
C13	C18	H15	H16	119.6	120.1
C17	C18	H15	H16	240.3	240.0
H15	C18	C17	H17	56.5	180.0
H15	C18	C17	H18	175.9	60.0
C13	C18	H16	C17	120.7	120.0
H16	C18	C13	H6	302.7	300.0
C13	C18	H16	H15	240.4	239.9
C17	C18	H16	H15	119.7	119.9
H16	C18	C17	H17	296.7	60.0
H16	C18	C17	H18	56.1	300.1
C16	C17	H17	C18	121.8	240.0
H17	C17	C18	H15	56.5	180.0
H17	C17	C18	H16	296.7	60.0
C18	C17	H17	H18	119.1	240.0
H17	C17	C16	O1	59.7	300.0
H17	C17	C16	H11	299.6	180.0
C16	C17	H17	H18	240.9	120.0
C16	C17	H18	C18	238.2	120.0
H18	C17	C18	H15	175.9	60.0
H18	C17	C18	H16	56.1	300.1
C18	C17	H18	H17	240.9	119.9
H18	C17	C16	O1	300.3	60.0
H18	C17	C16	H11	180.3	300.0
C16	C17	H18	H17	119.1	240.0
H19	O1	C16	H11	60.7	59.9
H20	N	C6	C5	133.2	212.5
H22	C	H21	H23	120.0	120.0
H21	C	H22	H23	240.0	240.0
H21	C	H23	H22	120.0	120.0
C6	C5	H24	C4	180.0	180.0
H24	C5	C4	H25	360.0	0.0
H25	C4	C3	O2	360.0	360.0
C3	C4	H25	C5	180.0	180.0
H25	C4	C5	H24	360.0	0.0