PDB Chemical Component M7P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for M7P
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O10 |
P |
1.604 |
1.609 |
O10 |
H10 |
0.950 |
0.967 |
P |
O8 |
1.608 |
1.480 |
P |
O9 |
1.481 |
1.610 |
P |
O7 |
1.618 |
1.610 |
O9 |
HO9 |
0.950 |
0.967 |
O7 |
C7 |
1.430 |
1.429 |
C7 |
C6 |
1.531 |
1.530 |
C7 |
H71 |
1.115 |
1.090 |
C7 |
H72 |
1.115 |
1.089 |
C6 |
O6 |
1.429 |
1.429 |
C6 |
C5 |
1.534 |
1.531 |
C6 |
H6 |
1.115 |
1.089 |
O6 |
HO6 |
0.950 |
0.967 |
C5 |
O5 |
1.434 |
1.426 |
C5 |
C4 |
1.530 |
1.531 |
C5 |
H5 |
1.115 |
1.089 |
O5 |
C1 |
1.440 |
1.426 |
C1 |
O1 |
1.426 |
1.429 |
C1 |
C2 |
1.532 |
1.530 |
C1 |
H1 |
1.116 |
1.089 |
O1 |
HO1 |
0.950 |
0.967 |
C2 |
O2 |
1.431 |
1.428 |
C2 |
C3 |
1.533 |
1.533 |
C2 |
H2 |
1.115 |
1.089 |
O2 |
HO2 |
0.950 |
0.967 |
C3 |
O3 |
1.431 |
1.429 |
C3 |
C4 |
1.530 |
1.534 |
C3 |
H3 |
1.115 |
1.089 |
O3 |
HO3 |
0.950 |
0.966 |
C4 |
O4 |
1.429 |
1.429 |
C4 |
H4 |
1.115 |
1.090 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for M7P
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
P |
O10 |
H10 |
105.6 |
106.9 |
O10 |
P |
O8 |
105.6 |
109.5 |
O10 |
P |
O9 |
111.8 |
109.5 |
O10 |
P |
O7 |
110.8 |
109.5 |
O8 |
P |
O9 |
112.1 |
109.5 |
O8 |
P |
O7 |
104.5 |
109.5 |
O9 |
P |
O7 |
111.7 |
109.5 |
P |
O9 |
HO9 |
111.8 |
106.8 |
P |
O7 |
C7 |
118.2 |
106.8 |
O7 |
C7 |
C6 |
117.0 |
109.5 |
O7 |
C7 |
H71 |
109.5 |
109.4 |
O7 |
C7 |
H72 |
109.5 |
109.5 |
C6 |
C7 |
H71 |
109.5 |
109.5 |
C6 |
C7 |
H72 |
109.5 |
109.5 |
C7 |
C6 |
O6 |
111.3 |
109.5 |
C7 |
C6 |
C5 |
115.5 |
109.4 |
C7 |
C6 |
H6 |
103.6 |
109.5 |
H71 |
C7 |
H72 |
100.6 |
109.5 |
O6 |
C6 |
C5 |
108.9 |
109.5 |
O6 |
C6 |
H6 |
111.0 |
109.5 |
C6 |
O6 |
HO6 |
111.3 |
106.8 |
C5 |
C6 |
H6 |
106.3 |
109.5 |
C6 |
C5 |
O5 |
110.5 |
109.4 |
C6 |
C5 |
C4 |
119.1 |
109.4 |
C6 |
C5 |
H5 |
101.4 |
109.4 |
O5 |
C5 |
C4 |
108.9 |
109.8 |
O5 |
C5 |
H5 |
113.3 |
109.4 |
C5 |
O5 |
C1 |
112.7 |
107.6 |
C4 |
C5 |
H5 |
103.3 |
109.4 |
C5 |
C4 |
C3 |
104.9 |
109.0 |
C5 |
C4 |
O4 |
111.1 |
109.5 |
C5 |
C4 |
H4 |
111.5 |
109.6 |
O5 |
C1 |
O1 |
109.2 |
109.4 |
O5 |
C1 |
C2 |
113.9 |
109.8 |
O5 |
C1 |
H1 |
106.2 |
109.4 |
O1 |
C1 |
C2 |
108.0 |
109.4 |
O1 |
C1 |
H1 |
112.2 |
109.4 |
C1 |
O1 |
HO1 |
109.2 |
106.8 |
C2 |
C1 |
H1 |
107.4 |
109.4 |
C1 |
C2 |
O2 |
108.5 |
109.5 |
C1 |
C2 |
C3 |
109.6 |
109.0 |
C1 |
C2 |
H2 |
110.9 |
109.5 |
O2 |
C2 |
C3 |
111.8 |
109.6 |
O2 |
C2 |
H2 |
108.6 |
109.6 |
C2 |
O2 |
HO2 |
108.5 |
106.8 |
C3 |
C2 |
H2 |
107.5 |
109.5 |
C2 |
C3 |
O3 |
112.2 |
109.6 |
C2 |
C3 |
C4 |
110.8 |
108.6 |
C2 |
C3 |
H3 |
107.4 |
109.6 |
O3 |
C3 |
C4 |
111.4 |
109.7 |
O3 |
C3 |
H3 |
106.6 |
109.6 |
C3 |
O3 |
HO3 |
112.2 |
106.8 |
C4 |
C3 |
H3 |
108.2 |
109.7 |
C3 |
C4 |
O4 |
109.9 |
109.5 |
C3 |
C4 |
H4 |
112.8 |
109.6 |
O4 |
C4 |
H4 |
106.7 |
109.6 |
C4 |
O4 |
HO4 |
111.1 |
106.8 |
Torsion Angles for M7P
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O8 |
P |
O10 |
O9 |
122.1 |
240.0 |
O8 |
P |
O10 |
O7 |
247.4 |
120.0 |
O9 |
P |
O10 |
O7 |
125.3 |
240.0 |
O10 |
P |
O9 |
HO9 |
180.0 |
60.0 |
O10 |
P |
O7 |
C7 |
296.1 |
175.0 |
H10 |
O10 |
P |
O8 |
180.0 |
300.0 |
H10 |
O10 |
P |
O9 |
57.9 |
60.0 |
H10 |
O10 |
P |
O7 |
292.6 |
180.0 |
O8 |
P |
O10 |
H10 |
180.0 |
300.0 |
O10 |
P |
O8 |
O9 |
238.1 |
120.0 |
O10 |
P |
O8 |
O7 |
117.0 |
240.0 |
O9 |
P |
O8 |
O7 |
238.9 |
120.0 |
O8 |
P |
O9 |
HO9 |
61.7 |
180.0 |
O8 |
P |
O7 |
C7 |
49.3 |
55.0 |
O9 |
P |
O10 |
H10 |
57.9 |
60.0 |
O10 |
P |
O9 |
O8 |
118.3 |
240.0 |
O10 |
P |
O9 |
O7 |
235.2 |
120.0 |
O8 |
P |
O9 |
O7 |
116.9 |
240.0 |
O9 |
P |
O7 |
C7 |
170.7 |
295.0 |
O7 |
P |
O10 |
H10 |
292.6 |
180.0 |
O10 |
P |
O7 |
O8 |
246.7 |
120.0 |
O10 |
P |
O7 |
O9 |
125.4 |
240.0 |
O8 |
P |
O7 |
O9 |
238.7 |
120.0 |
O7 |
P |
O9 |
HO9 |
304.9 |
300.0 |
P |
O7 |
C7 |
C6 |
183.1 |
180.0 |
P |
O7 |
C7 |
H71 |
57.8 |
60.0 |
P |
O7 |
C7 |
H72 |
308.4 |
300.1 |
HO9 |
O9 |
P |
O7 |
304.9 |
300.0 |
C6 |
C7 |
O7 |
H71 |
125.3 |
120.0 |
C6 |
C7 |
O7 |
H72 |
234.7 |
239.9 |
O7 |
C7 |
C6 |
O6 |
321.0 |
65.1 |
O7 |
C7 |
C6 |
C5 |
85.8 |
185.0 |
O7 |
C7 |
C6 |
H6 |
201.7 |
305.0 |
H71 |
C7 |
O7 |
H72 |
109.5 |
119.9 |
O7 |
C7 |
C6 |
H71 |
234.7 |
240.1 |
O7 |
C7 |
C6 |
H72 |
125.3 |
120.1 |
H71 |
C7 |
C6 |
H72 |
250.5 |
240.0 |
O6 |
C6 |
C7 |
C5 |
235.2 |
240.0 |
O6 |
C6 |
C7 |
H6 |
119.4 |
120.0 |
C7 |
C6 |
O6 |
HO6 |
180.0 |
60.0 |
C5 |
C6 |
C7 |
H6 |
244.1 |
240.0 |
C7 |
C6 |
C5 |
O5 |
278.2 |
59.9 |
C7 |
C6 |
C5 |
C4 |
45.3 |
180.2 |
C7 |
C6 |
C5 |
H5 |
157.7 |
300.0 |
O7 |
C7 |
H71 |
C6 |
129.5 |
120.0 |
O7 |
C7 |
H71 |
H72 |
244.7 |
240.0 |
C6 |
C7 |
H71 |
H72 |
115.2 |
120.1 |
H71 |
C7 |
C6 |
O6 |
86.3 |
185.0 |
H71 |
C7 |
C6 |
C5 |
211.1 |
305.0 |
H71 |
C7 |
C6 |
H6 |
326.9 |
64.9 |
O7 |
C7 |
H72 |
C6 |
230.5 |
239.9 |
O7 |
C7 |
H72 |
H71 |
115.2 |
119.9 |
C6 |
C7 |
H72 |
H71 |
244.7 |
240.0 |
H72 |
C7 |
C6 |
O6 |
195.8 |
305.0 |
H72 |
C7 |
C6 |
C5 |
320.5 |
65.0 |
H72 |
C7 |
C6 |
H6 |
76.4 |
185.0 |
O6 |
C6 |
C7 |
H71 |
86.3 |
185.0 |
O6 |
C6 |
C7 |
H72 |
195.8 |
305.0 |
C7 |
C6 |
O6 |
C5 |
128.4 |
120.0 |
C7 |
C6 |
O6 |
H6 |
245.1 |
240.0 |
C5 |
C6 |
O6 |
H6 |
116.7 |
120.0 |
O6 |
C6 |
C5 |
O5 |
44.2 |
179.9 |
O6 |
C6 |
C5 |
C4 |
171.3 |
300.1 |
O6 |
C6 |
C5 |
H5 |
283.8 |
60.0 |
C5 |
C6 |
C7 |
H71 |
211.1 |
305.0 |
C5 |
C6 |
C7 |
H72 |
320.5 |
65.0 |
C7 |
C6 |
C5 |
O6 |
234.0 |
240.0 |
C7 |
C6 |
C5 |
H6 |
114.3 |
120.0 |
O6 |
C6 |
C5 |
H6 |
240.4 |
240.0 |
C5 |
C6 |
O6 |
HO6 |
51.6 |
300.0 |
O5 |
C5 |
C6 |
C4 |
232.9 |
239.7 |
O5 |
C5 |
C6 |
H5 |
120.5 |
119.9 |
C6 |
C5 |
O5 |
C1 |
196.3 |
187.6 |
C4 |
C5 |
C6 |
H5 |
247.5 |
240.1 |
C6 |
C5 |
C4 |
C3 |
165.6 |
178.6 |
C6 |
C5 |
C4 |
O4 |
46.8 |
58.7 |
C6 |
C5 |
C4 |
H4 |
288.0 |
298.5 |
H6 |
C6 |
C7 |
H71 |
326.9 |
64.9 |
H6 |
C6 |
C7 |
H72 |
76.4 |
185.0 |
C7 |
C6 |
H6 |
O6 |
119.6 |
120.0 |
C7 |
C6 |
H6 |
C5 |
237.8 |
240.0 |
O6 |
C6 |
H6 |
C5 |
118.2 |
120.0 |
H6 |
C6 |
O6 |
HO6 |
294.9 |
180.0 |
H6 |
C6 |
C5 |
O5 |
163.9 |
299.9 |
H6 |
C6 |
C5 |
C4 |
290.9 |
60.2 |
H6 |
C6 |
C5 |
H5 |
43.4 |
180.0 |
HO6 |
O6 |
C6 |
C5 |
51.6 |
300.0 |
HO6 |
O6 |
C6 |
H6 |
294.9 |
180.0 |
O5 |
C5 |
C6 |
H6 |
163.9 |
299.9 |
C6 |
C5 |
O5 |
C4 |
132.5 |
120.0 |
C6 |
C5 |
O5 |
H5 |
246.9 |
240.1 |
C4 |
C5 |
O5 |
H5 |
114.4 |
120.1 |
O5 |
C5 |
C4 |
C3 |
293.4 |
298.6 |
O5 |
C5 |
C4 |
O4 |
174.7 |
178.8 |
O5 |
C5 |
C4 |
H4 |
55.8 |
58.5 |
C5 |
O5 |
C1 |
O1 |
67.3 |
52.5 |
C5 |
O5 |
C1 |
C2 |
306.4 |
292.4 |
C5 |
O5 |
C1 |
H1 |
188.4 |
172.3 |
C4 |
C5 |
C6 |
H6 |
290.9 |
60.2 |
C6 |
C5 |
C4 |
O5 |
232.2 |
239.9 |
C6 |
C5 |
C4 |
H5 |
111.4 |
119.8 |
O5 |
C5 |
C4 |
H5 |
239.3 |
239.9 |
C4 |
C5 |
O5 |
C1 |
63.7 |
67.6 |
C2 |
C3 |
C4 |
C5 |
62.1 |
53.9 |
O3 |
C3 |
C4 |
C5 |
187.8 |
173.6 |
C5 |
C4 |
C3 |
H3 |
304.7 |
294.1 |
C3 |
C4 |
C5 |
O4 |
118.8 |
119.8 |
C3 |
C4 |
C5 |
H4 |
237.7 |
240.1 |
O4 |
C4 |
C5 |
H4 |
118.9 |
120.3 |
C5 |
C4 |
O4 |
HO4 |
180.0 |
179.5 |
H5 |
C5 |
C6 |
H6 |
43.4 |
180.0 |
C6 |
C5 |
H5 |
O5 |
118.4 |
119.9 |
C6 |
C5 |
H5 |
C4 |
236.1 |
240.2 |
O5 |
C5 |
H5 |
C4 |
117.7 |
120.3 |
H5 |
C5 |
O5 |
C1 |
309.3 |
307.5 |
H5 |
C5 |
C4 |
C3 |
54.2 |
58.7 |
H5 |
C5 |
C4 |
O4 |
295.4 |
298.9 |
H5 |
C5 |
C4 |
H4 |
176.5 |
178.6 |
C1 |
O5 |
C5 |
C4 |
63.7 |
67.6 |
C1 |
O5 |
C5 |
H5 |
309.3 |
307.5 |
O1 |
C1 |
O5 |
C2 |
120.9 |
120.0 |
O1 |
C1 |
O5 |
H1 |
238.8 |
240.2 |
O5 |
C1 |
O1 |
HO1 |
180.0 |
60.0 |
C2 |
C1 |
O5 |
H1 |
117.9 |
120.1 |
O5 |
C1 |
C2 |
O2 |
284.6 |
301.3 |
O5 |
C1 |
C2 |
C3 |
46.9 |
61.3 |
O5 |
C1 |
C2 |
H2 |
165.4 |
181.1 |
O5 |
C1 |
O1 |
C2 |
235.6 |
239.7 |
O5 |
C1 |
O1 |
H1 |
117.4 |
119.8 |
C2 |
C1 |
O1 |
H1 |
241.8 |
240.1 |
O1 |
C1 |
C2 |
O2 |
163.0 |
181.3 |
O1 |
C1 |
C2 |
C3 |
285.4 |
301.2 |
O1 |
C1 |
C2 |
H2 |
43.8 |
61.0 |
O5 |
C1 |
C2 |
O1 |
121.5 |
120.0 |
O5 |
C1 |
C2 |
H1 |
242.8 |
239.9 |
O1 |
C1 |
C2 |
H1 |
121.2 |
119.9 |
C2 |
C1 |
O1 |
HO1 |
304.3 |
180.3 |
O2 |
C2 |
C1 |
C3 |
237.7 |
240.0 |
O2 |
C2 |
C1 |
H2 |
119.2 |
120.2 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
300.0 |
C3 |
C2 |
C1 |
H2 |
241.5 |
240.2 |
C1 |
C2 |
C3 |
O3 |
182.0 |
186.4 |
C1 |
C2 |
C3 |
C4 |
307.3 |
306.2 |
C1 |
C2 |
C3 |
H3 |
65.2 |
66.0 |
O5 |
C1 |
H1 |
O1 |
240.7 |
240.2 |
O5 |
C1 |
H1 |
C2 |
122.2 |
120.4 |
O1 |
C1 |
H1 |
C2 |
241.4 |
240.2 |
H1 |
C1 |
O1 |
HO1 |
62.5 |
300.1 |
H1 |
C1 |
C2 |
O2 |
41.8 |
61.4 |
H1 |
C1 |
C2 |
C3 |
164.1 |
181.4 |
H1 |
C1 |
C2 |
H2 |
282.6 |
301.2 |
HO1 |
O1 |
C1 |
C2 |
304.3 |
180.3 |
HO1 |
O1 |
C1 |
H1 |
62.5 |
300.1 |
O2 |
C2 |
C1 |
H1 |
41.8 |
61.4 |
C1 |
C2 |
O2 |
C3 |
120.9 |
119.6 |
C1 |
C2 |
O2 |
H2 |
239.4 |
239.8 |
C3 |
C2 |
O2 |
H2 |
118.4 |
120.2 |
O2 |
C2 |
C3 |
O3 |
302.3 |
306.3 |
O2 |
C2 |
C3 |
C4 |
67.6 |
66.1 |
O2 |
C2 |
C3 |
H3 |
185.5 |
185.9 |
C5 |
C4 |
C3 |
C2 |
62.1 |
53.9 |
C3 |
C2 |
C1 |
H1 |
164.1 |
181.4 |
C1 |
C2 |
C3 |
O2 |
239.7 |
240.1 |
C1 |
C2 |
C3 |
H2 |
120.6 |
119.8 |
O2 |
C2 |
C3 |
H2 |
240.9 |
239.7 |
C3 |
C2 |
O2 |
HO2 |
59.0 |
180.4 |
O3 |
C3 |
C2 |
C4 |
234.8 |
240.2 |
O3 |
C3 |
C2 |
H3 |
116.9 |
120.4 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
C4 |
C3 |
C2 |
H3 |
242.1 |
240.2 |
C2 |
C3 |
C4 |
O4 |
181.7 |
173.7 |
C2 |
C3 |
C4 |
H4 |
300.6 |
293.9 |
H2 |
C2 |
C1 |
H1 |
282.6 |
301.2 |
C1 |
C2 |
H2 |
O2 |
119.1 |
120.2 |
C1 |
C2 |
H2 |
C3 |
240.3 |
240.5 |
O2 |
C2 |
H2 |
C3 |
121.2 |
120.3 |
H2 |
C2 |
O2 |
HO2 |
300.6 |
60.1 |
H2 |
C2 |
C3 |
O3 |
61.4 |
66.6 |
H2 |
C2 |
C3 |
C4 |
186.7 |
186.4 |
H2 |
C2 |
C3 |
H3 |
304.6 |
306.2 |
HO2 |
O2 |
C2 |
C3 |
59.0 |
180.4 |
HO2 |
O2 |
C2 |
H2 |
300.6 |
60.1 |
C5 |
C4 |
C3 |
O3 |
187.8 |
173.6 |
O3 |
C3 |
C2 |
H2 |
61.4 |
66.6 |
C2 |
C3 |
O3 |
C4 |
124.9 |
119.1 |
C2 |
C3 |
O3 |
H3 |
242.7 |
239.6 |
C4 |
C3 |
O3 |
H3 |
117.8 |
120.5 |
O3 |
C3 |
C4 |
O4 |
307.3 |
293.4 |
O3 |
C3 |
C4 |
H4 |
66.2 |
53.7 |
C3 |
C4 |
C5 |
H5 |
54.2 |
58.7 |
C5 |
C4 |
C3 |
O4 |
240.4 |
240.2 |
C5 |
C4 |
C3 |
H4 |
121.6 |
119.9 |
C4 |
C3 |
C2 |
H2 |
186.7 |
186.4 |
C2 |
C3 |
C4 |
O3 |
234.4 |
240.3 |
C2 |
C3 |
C4 |
H3 |
117.5 |
119.8 |
O3 |
C3 |
C4 |
H3 |
243.1 |
239.5 |
C4 |
C3 |
O3 |
HO3 |
55.2 |
180.8 |
O4 |
C4 |
C3 |
H4 |
241.1 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
64.3 |
60.0 |
H3 |
C3 |
C2 |
H2 |
304.6 |
306.2 |
C2 |
C3 |
H3 |
O3 |
120.4 |
120.4 |
C2 |
C3 |
H3 |
C4 |
240.4 |
240.9 |
O3 |
C3 |
H3 |
C4 |
120.0 |
120.5 |
H3 |
C3 |
O3 |
HO3 |
297.3 |
60.3 |
H3 |
C3 |
C4 |
O4 |
64.2 |
53.9 |
H3 |
C3 |
C4 |
H4 |
183.1 |
174.1 |
HO3 |
O3 |
C3 |
C4 |
55.2 |
180.8 |
HO3 |
O3 |
C3 |
H3 |
297.3 |
60.3 |
O4 |
C4 |
C5 |
H5 |
295.4 |
298.9 |
C5 |
C4 |
O4 |
C3 |
115.7 |
119.5 |
C5 |
C4 |
O4 |
H4 |
238.2 |
239.7 |
O4 |
C4 |
C3 |
H3 |
64.2 |
53.9 |
C3 |
C4 |
O4 |
H4 |
122.5 |
120.2 |
H4 |
C4 |
C5 |
H5 |
176.5 |
178.6 |
C5 |
C4 |
H4 |
C3 |
242.3 |
240.4 |
C5 |
C4 |
H4 |
O4 |
121.5 |
120.2 |
H4 |
C4 |
C3 |
H3 |
183.1 |
174.1 |
C3 |
C4 |
H4 |
O4 |
239.2 |
239.8 |
H4 |
C4 |
O4 |
HO4 |
301.8 |
299.8 |
HO4 |
O4 |
C4 |
H4 |
301.8 |
299.8 |