PDB Chemical Component M7P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M7P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O10 P 1.604 1.609
O10 H10 0.950 0.967
P O8 1.608 1.480
P O9 1.481 1.610
P O7 1.618 1.610
O9 HO9 0.950 0.967
O7 C7 1.430 1.429
C7 C6 1.531 1.530
C7 H71 1.115 1.090
C7 H72 1.115 1.089
C6 O6 1.429 1.429
C6 C5 1.534 1.531
C6 H6 1.115 1.089
O6 HO6 0.950 0.967
C5 O5 1.434 1.426
C5 C4 1.530 1.531
C5 H5 1.115 1.089
O5 C1 1.440 1.426
C1 O1 1.426 1.429
C1 C2 1.532 1.530
C1 H1 1.116 1.089
O1 HO1 0.950 0.967
C2 O2 1.431 1.428
C2 C3 1.533 1.533
C2 H2 1.115 1.089
O2 HO2 0.950 0.967
C3 O3 1.431 1.429
C3 C4 1.530 1.534
C3 H3 1.115 1.089
O3 HO3 0.950 0.966
C4 O4 1.429 1.429
C4 H4 1.115 1.090
O4 HO4 0.950 0.967

Bond Angles for M7P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
P O10 H10 105.6 106.9
O10 P O8 105.6 109.5
O10 P O9 111.8 109.5
O10 P O7 110.8 109.5
O8 P O9 112.1 109.5
O8 P O7 104.5 109.5
O9 P O7 111.7 109.5
P O9 HO9 111.8 106.8
P O7 C7 118.2 106.8
O7 C7 C6 117.0 109.5
O7 C7 H71 109.5 109.4
O7 C7 H72 109.5 109.5
C6 C7 H71 109.5 109.5
C6 C7 H72 109.5 109.5
C7 C6 O6 111.3 109.5
C7 C6 C5 115.5 109.4
C7 C6 H6 103.6 109.5
H71 C7 H72 100.6 109.5
O6 C6 C5 108.9 109.5
O6 C6 H6 111.0 109.5
C6 O6 HO6 111.3 106.8
C5 C6 H6 106.3 109.5
C6 C5 O5 110.5 109.4
C6 C5 C4 119.1 109.4
C6 C5 H5 101.4 109.4
O5 C5 C4 108.9 109.8
O5 C5 H5 113.3 109.4
C5 O5 C1 112.7 107.6
C4 C5 H5 103.3 109.4
C5 C4 C3 104.9 109.0
C5 C4 O4 111.1 109.5
C5 C4 H4 111.5 109.6
O5 C1 O1 109.2 109.4
O5 C1 C2 113.9 109.8
O5 C1 H1 106.2 109.4
O1 C1 C2 108.0 109.4
O1 C1 H1 112.2 109.4
C1 O1 HO1 109.2 106.8
C2 C1 H1 107.4 109.4
C1 C2 O2 108.5 109.5
C1 C2 C3 109.6 109.0
C1 C2 H2 110.9 109.5
O2 C2 C3 111.8 109.6
O2 C2 H2 108.6 109.6
C2 O2 HO2 108.5 106.8
C3 C2 H2 107.5 109.5
C2 C3 O3 112.2 109.6
C2 C3 C4 110.8 108.6
C2 C3 H3 107.4 109.6
O3 C3 C4 111.4 109.7
O3 C3 H3 106.6 109.6
C3 O3 HO3 112.2 106.8
C4 C3 H3 108.2 109.7
C3 C4 O4 109.9 109.5
C3 C4 H4 112.8 109.6
O4 C4 H4 106.7 109.6
C4 O4 HO4 111.1 106.8

Torsion Angles for M7P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O8 P O10 O9 122.1 240.0
O8 P O10 O7 247.4 120.0
O9 P O10 O7 125.3 240.0
O10 P O9 HO9 180.0 60.0
O10 P O7 C7 296.1 175.0
H10 O10 P O8 180.0 300.0
H10 O10 P O9 57.9 60.0
H10 O10 P O7 292.6 180.0
O8 P O10 H10 180.0 300.0
O10 P O8 O9 238.1 120.0
O10 P O8 O7 117.0 240.0
O9 P O8 O7 238.9 120.0
O8 P O9 HO9 61.7 180.0
O8 P O7 C7 49.3 55.0
O9 P O10 H10 57.9 60.0
O10 P O9 O8 118.3 240.0
O10 P O9 O7 235.2 120.0
O8 P O9 O7 116.9 240.0
O9 P O7 C7 170.7 295.0
O7 P O10 H10 292.6 180.0
O10 P O7 O8 246.7 120.0
O10 P O7 O9 125.4 240.0
O8 P O7 O9 238.7 120.0
O7 P O9 HO9 304.9 300.0
P O7 C7 C6 183.1 180.0
P O7 C7 H71 57.8 60.0
P O7 C7 H72 308.4 300.1
HO9 O9 P O7 304.9 300.0
C6 C7 O7 H71 125.3 120.0
C6 C7 O7 H72 234.7 239.9
O7 C7 C6 O6 321.0 65.1
O7 C7 C6 C5 85.8 185.0
O7 C7 C6 H6 201.7 305.0
H71 C7 O7 H72 109.5 119.9
O7 C7 C6 H71 234.7 240.1
O7 C7 C6 H72 125.3 120.1
H71 C7 C6 H72 250.5 240.0
O6 C6 C7 C5 235.2 240.0
O6 C6 C7 H6 119.4 120.0
C7 C6 O6 HO6 180.0 60.0
C5 C6 C7 H6 244.1 240.0
C7 C6 C5 O5 278.2 59.9
C7 C6 C5 C4 45.3 180.2
C7 C6 C5 H5 157.7 300.0
O7 C7 H71 C6 129.5 120.0
O7 C7 H71 H72 244.7 240.0
C6 C7 H71 H72 115.2 120.1
H71 C7 C6 O6 86.3 185.0
H71 C7 C6 C5 211.1 305.0
H71 C7 C6 H6 326.9 64.9
O7 C7 H72 C6 230.5 239.9
O7 C7 H72 H71 115.2 119.9
C6 C7 H72 H71 244.7 240.0
H72 C7 C6 O6 195.8 305.0
H72 C7 C6 C5 320.5 65.0
H72 C7 C6 H6 76.4 185.0
O6 C6 C7 H71 86.3 185.0
O6 C6 C7 H72 195.8 305.0
C7 C6 O6 C5 128.4 120.0
C7 C6 O6 H6 245.1 240.0
C5 C6 O6 H6 116.7 120.0
O6 C6 C5 O5 44.2 179.9
O6 C6 C5 C4 171.3 300.1
O6 C6 C5 H5 283.8 60.0
C5 C6 C7 H71 211.1 305.0
C5 C6 C7 H72 320.5 65.0
C7 C6 C5 O6 234.0 240.0
C7 C6 C5 H6 114.3 120.0
O6 C6 C5 H6 240.4 240.0
C5 C6 O6 HO6 51.6 300.0
O5 C5 C6 C4 232.9 239.7
O5 C5 C6 H5 120.5 119.9
C6 C5 O5 C1 196.3 187.6
C4 C5 C6 H5 247.5 240.1
C6 C5 C4 C3 165.6 178.6
C6 C5 C4 O4 46.8 58.7
C6 C5 C4 H4 288.0 298.5
H6 C6 C7 H71 326.9 64.9
H6 C6 C7 H72 76.4 185.0
C7 C6 H6 O6 119.6 120.0
C7 C6 H6 C5 237.8 240.0
O6 C6 H6 C5 118.2 120.0
H6 C6 O6 HO6 294.9 180.0
H6 C6 C5 O5 163.9 299.9
H6 C6 C5 C4 290.9 60.2
H6 C6 C5 H5 43.4 180.0
HO6 O6 C6 C5 51.6 300.0
HO6 O6 C6 H6 294.9 180.0
O5 C5 C6 H6 163.9 299.9
C6 C5 O5 C4 132.5 120.0
C6 C5 O5 H5 246.9 240.1
C4 C5 O5 H5 114.4 120.1
O5 C5 C4 C3 293.4 298.6
O5 C5 C4 O4 174.7 178.8
O5 C5 C4 H4 55.8 58.5
C5 O5 C1 O1 67.3 52.5
C5 O5 C1 C2 306.4 292.4
C5 O5 C1 H1 188.4 172.3
C4 C5 C6 H6 290.9 60.2
C6 C5 C4 O5 232.2 239.9
C6 C5 C4 H5 111.4 119.8
O5 C5 C4 H5 239.3 239.9
C4 C5 O5 C1 63.7 67.6
C2 C3 C4 C5 62.1 53.9
O3 C3 C4 C5 187.8 173.6
C5 C4 C3 H3 304.7 294.1
C3 C4 C5 O4 118.8 119.8
C3 C4 C5 H4 237.7 240.1
O4 C4 C5 H4 118.9 120.3
C5 C4 O4 HO4 180.0 179.5
H5 C5 C6 H6 43.4 180.0
C6 C5 H5 O5 118.4 119.9
C6 C5 H5 C4 236.1 240.2
O5 C5 H5 C4 117.7 120.3
H5 C5 O5 C1 309.3 307.5
H5 C5 C4 C3 54.2 58.7
H5 C5 C4 O4 295.4 298.9
H5 C5 C4 H4 176.5 178.6
C1 O5 C5 C4 63.7 67.6
C1 O5 C5 H5 309.3 307.5
O1 C1 O5 C2 120.9 120.0
O1 C1 O5 H1 238.8 240.2
O5 C1 O1 HO1 180.0 60.0
C2 C1 O5 H1 117.9 120.1
O5 C1 C2 O2 284.6 301.3
O5 C1 C2 C3 46.9 61.3
O5 C1 C2 H2 165.4 181.1
O5 C1 O1 C2 235.6 239.7
O5 C1 O1 H1 117.4 119.8
C2 C1 O1 H1 241.8 240.1
O1 C1 C2 O2 163.0 181.3
O1 C1 C2 C3 285.4 301.2
O1 C1 C2 H2 43.8 61.0
O5 C1 C2 O1 121.5 120.0
O5 C1 C2 H1 242.8 239.9
O1 C1 C2 H1 121.2 119.9
C2 C1 O1 HO1 304.3 180.3
O2 C2 C1 C3 237.7 240.0
O2 C2 C1 H2 119.2 120.2
C1 C2 O2 HO2 180.0 300.0
C3 C2 C1 H2 241.5 240.2
C1 C2 C3 O3 182.0 186.4
C1 C2 C3 C4 307.3 306.2
C1 C2 C3 H3 65.2 66.0
O5 C1 H1 O1 240.7 240.2
O5 C1 H1 C2 122.2 120.4
O1 C1 H1 C2 241.4 240.2
H1 C1 O1 HO1 62.5 300.1
H1 C1 C2 O2 41.8 61.4
H1 C1 C2 C3 164.1 181.4
H1 C1 C2 H2 282.6 301.2
HO1 O1 C1 C2 304.3 180.3
HO1 O1 C1 H1 62.5 300.1
O2 C2 C1 H1 41.8 61.4
C1 C2 O2 C3 120.9 119.6
C1 C2 O2 H2 239.4 239.8
C3 C2 O2 H2 118.4 120.2
O2 C2 C3 O3 302.3 306.3
O2 C2 C3 C4 67.6 66.1
O2 C2 C3 H3 185.5 185.9
C5 C4 C3 C2 62.1 53.9
C3 C2 C1 H1 164.1 181.4
C1 C2 C3 O2 239.7 240.1
C1 C2 C3 H2 120.6 119.8
O2 C2 C3 H2 240.9 239.7
C3 C2 O2 HO2 59.0 180.4
O3 C3 C2 C4 234.8 240.2
O3 C3 C2 H3 116.9 120.4
C2 C3 O3 HO3 180.0 300.0
C4 C3 C2 H3 242.1 240.2
C2 C3 C4 O4 181.7 173.7
C2 C3 C4 H4 300.6 293.9
H2 C2 C1 H1 282.6 301.2
C1 C2 H2 O2 119.1 120.2
C1 C2 H2 C3 240.3 240.5
O2 C2 H2 C3 121.2 120.3
H2 C2 O2 HO2 300.6 60.1
H2 C2 C3 O3 61.4 66.6
H2 C2 C3 C4 186.7 186.4
H2 C2 C3 H3 304.6 306.2
HO2 O2 C2 C3 59.0 180.4
HO2 O2 C2 H2 300.6 60.1
C5 C4 C3 O3 187.8 173.6
O3 C3 C2 H2 61.4 66.6
C2 C3 O3 C4 124.9 119.1
C2 C3 O3 H3 242.7 239.6
C4 C3 O3 H3 117.8 120.5
O3 C3 C4 O4 307.3 293.4
O3 C3 C4 H4 66.2 53.7
C3 C4 C5 H5 54.2 58.7
C5 C4 C3 O4 240.4 240.2
C5 C4 C3 H4 121.6 119.9
C4 C3 C2 H2 186.7 186.4
C2 C3 C4 O3 234.4 240.3
C2 C3 C4 H3 117.5 119.8
O3 C3 C4 H3 243.1 239.5
C4 C3 O3 HO3 55.2 180.8
O4 C4 C3 H4 241.1 239.8
C3 C4 O4 HO4 64.3 60.0
H3 C3 C2 H2 304.6 306.2
C2 C3 H3 O3 120.4 120.4
C2 C3 H3 C4 240.4 240.9
O3 C3 H3 C4 120.0 120.5
H3 C3 O3 HO3 297.3 60.3
H3 C3 C4 O4 64.2 53.9
H3 C3 C4 H4 183.1 174.1
HO3 O3 C3 C4 55.2 180.8
HO3 O3 C3 H3 297.3 60.3
O4 C4 C5 H5 295.4 298.9
C5 C4 O4 C3 115.7 119.5
C5 C4 O4 H4 238.2 239.7
O4 C4 C3 H3 64.2 53.9
C3 C4 O4 H4 122.5 120.2
H4 C4 C5 H5 176.5 178.6
C5 C4 H4 C3 242.3 240.4
C5 C4 H4 O4 121.5 120.2
H4 C4 C3 H3 183.1 174.1
C3 C4 H4 O4 239.2 239.8
H4 C4 O4 HO4 301.8 299.8
HO4 O4 C4 H4 301.8 299.8