PDB Chemical Component M62
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for M62
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N12 |
C11 |
1.438 |
1.465 |
| N12 |
C21 |
1.350 |
1.397 |
| C11 |
C08 |
1.519 |
1.508 |
| C09 |
C08 |
1.396 |
1.361 |
| C09 |
C10 |
1.401 |
1.405 |
| C08 |
C07 |
1.392 |
1.393 |
| C21 |
C26 |
1.391 |
1.389 |
| C21 |
C22 |
1.395 |
1.389 |
| C26 |
C25 |
1.394 |
1.383 |
| N01 |
C10 |
1.355 |
1.338 |
| N01 |
C02 |
1.355 |
1.317 |
| C10 |
C05 |
1.390 |
1.417 |
| C22 |
C23 |
1.391 |
1.380 |
| C07 |
C06 |
1.392 |
1.362 |
| C25 |
F27 |
1.341 |
1.351 |
| C25 |
C24 |
1.391 |
1.385 |
| N02 |
C02 |
1.363 |
1.387 |
| C02 |
C03 |
1.395 |
1.402 |
| C05 |
C06 |
1.391 |
1.404 |
| C05 |
C04 |
1.403 |
1.409 |
| C23 |
C24 |
1.388 |
1.383 |
| C03 |
C04 |
1.396 |
1.362 |
| N02 |
H1 |
1.000 |
0.970 |
| N02 |
H2 |
1.000 |
0.970 |
| C03 |
H3 |
1.080 |
1.080 |
| C04 |
H4 |
1.080 |
1.081 |
| C06 |
H5 |
1.080 |
1.080 |
| C07 |
H6 |
1.080 |
1.079 |
| C09 |
H7 |
1.080 |
1.080 |
| C11 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.100 |
1.090 |
| N12 |
H10 |
1.000 |
0.970 |
| C22 |
H11 |
1.080 |
1.080 |
| C23 |
H12 |
1.080 |
1.081 |
| C24 |
H13 |
1.080 |
1.081 |
| C26 |
H14 |
1.080 |
1.080 |
Bond Angles for M62
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N12 |
C11 |
H8 |
108.6 |
109.4 |
| N12 |
C11 |
H9 |
108.6 |
109.5 |
| N12 |
C21 |
C26 |
121.1 |
120.1 |
| N12 |
C21 |
C22 |
119.3 |
120.0 |
| C21 |
N12 |
H10 |
107.8 |
120.0 |
| N01 |
C10 |
C09 |
120.3 |
121.0 |
| C10 |
C09 |
H7 |
119.8 |
120.1 |
| C08 |
C07 |
H6 |
119.8 |
119.6 |
| C22 |
C21 |
C26 |
119.5 |
119.9 |
| C21 |
C26 |
C25 |
119.4 |
119.9 |
| C21 |
C26 |
H14 |
120.3 |
120.1 |
| C21 |
C22 |
C23 |
121.1 |
120.0 |
| C21 |
C22 |
H11 |
119.5 |
120.0 |
| C02 |
N01 |
C10 |
122.1 |
121.3 |
| N01 |
C10 |
C05 |
119.5 |
119.9 |
| N01 |
C02 |
N02 |
119.6 |
119.3 |
| N01 |
C02 |
C03 |
120.2 |
121.5 |
| C22 |
C23 |
C24 |
119.3 |
120.1 |
| C23 |
C22 |
H11 |
119.5 |
120.0 |
| C22 |
C23 |
H12 |
120.4 |
119.9 |
| C07 |
C06 |
H5 |
119.7 |
120.2 |
| C25 |
C24 |
H13 |
120.0 |
119.9 |
| N02 |
C02 |
C03 |
120.3 |
119.2 |
| C02 |
N02 |
H1 |
109.5 |
120.0 |
| C02 |
N02 |
H2 |
109.4 |
120.0 |
| C02 |
C03 |
C04 |
119.2 |
119.9 |
| C02 |
C03 |
H3 |
120.4 |
120.1 |
| C05 |
C06 |
H5 |
119.7 |
120.2 |
| C05 |
C04 |
H4 |
120.4 |
120.8 |
| C24 |
C23 |
H12 |
120.4 |
119.9 |
| C23 |
C24 |
H13 |
120.0 |
119.9 |
| C04 |
C03 |
H3 |
120.4 |
120.1 |
| C03 |
C04 |
H4 |
120.4 |
120.9 |
| H1 |
N02 |
H2 |
109.5 |
120.0 |
| H8 |
C11 |
H9 |
109.5 |
109.5 |
Torsion Angles for M62
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H8 |
C11 |
N12 |
H9 |
241.0 |
120.0 |
| C21 |
N12 |
C11 |
H8 |
20.4 |
60.0 |
| C21 |
N12 |
C11 |
H9 |
139.4 |
300.0 |
| C22 |
C21 |
N12 |
C26 |
180.4 |
180.2 |
| N12 |
C21 |
C26 |
C25 |
180.6 |
179.7 |
| N12 |
C21 |
C26 |
H14 |
0.6 |
359.9 |
| N12 |
C21 |
C22 |
C23 |
179.3 |
180.0 |
| N12 |
C21 |
C22 |
H11 |
359.3 |
0.1 |
| C11 |
C08 |
C07 |
H6 |
0.2 |
0.0 |
| N01 |
C10 |
C09 |
C08 |
179.4 |
180.0 |
| C09 |
C08 |
C07 |
H6 |
180.3 |
180.0 |
| C02 |
N01 |
C10 |
C09 |
180.4 |
180.0 |
| N01 |
C10 |
C09 |
C05 |
179.6 |
180.0 |
| C08 |
C07 |
C06 |
H5 |
178.8 |
180.1 |
| N12 |
C21 |
C26 |
C22 |
180.4 |
180.2 |
| C26 |
C21 |
N12 |
H10 |
48.0 |
0.1 |
| C26 |
C21 |
C22 |
C23 |
359.7 |
0.1 |
| C26 |
C21 |
C22 |
H11 |
179.7 |
180.3 |
| N12 |
C21 |
C22 |
C26 |
179.6 |
179.8 |
| C22 |
C21 |
N12 |
H10 |
228.4 |
180.2 |
| C22 |
C21 |
C26 |
C25 |
0.2 |
359.5 |
| C22 |
C21 |
C26 |
H14 |
180.2 |
179.7 |
| C21 |
C22 |
C23 |
C24 |
359.9 |
0.1 |
| C23 |
C22 |
C21 |
H11 |
180.0 |
179.9 |
| C21 |
C22 |
C23 |
H12 |
180.0 |
180.0 |
| C21 |
C26 |
C25 |
H14 |
180.0 |
180.2 |
| C26 |
C25 |
C24 |
H13 |
179.4 |
179.8 |
| N01 |
C10 |
C09 |
H7 |
359.4 |
0.0 |
| C10 |
N01 |
C02 |
N02 |
179.3 |
180.0 |
| C10 |
N01 |
C02 |
C03 |
358.8 |
360.0 |
| C02 |
N01 |
C10 |
C05 |
0.0 |
0.0 |
| N02 |
C02 |
N01 |
C03 |
180.5 |
180.0 |
| N01 |
C02 |
N02 |
H1 |
360.0 |
0.0 |
| N01 |
C02 |
N02 |
H2 |
120.0 |
180.0 |
| N01 |
C02 |
C03 |
C04 |
1.3 |
0.0 |
| N01 |
C02 |
C03 |
H3 |
181.3 |
180.0 |
| N01 |
C10 |
C05 |
C09 |
180.4 |
180.0 |
| C10 |
C05 |
C06 |
H5 |
181.3 |
180.0 |
| C10 |
C05 |
C04 |
H4 |
179.2 |
180.0 |
| C23 |
C22 |
C21 |
C26 |
359.7 |
0.1 |
| C21 |
C22 |
C23 |
H11 |
180.0 |
180.1 |
| C24 |
C23 |
C22 |
H12 |
180.0 |
180.1 |
| C22 |
C23 |
C24 |
H13 |
180.5 |
179.9 |
| C05 |
C06 |
C07 |
H5 |
180.0 |
180.0 |
| C21 |
C26 |
C25 |
F27 |
180.3 |
180.2 |
| F27 |
C25 |
C24 |
H13 |
359.3 |
0.0 |
| C21 |
C26 |
C25 |
C24 |
0.2 |
0.5 |
| C25 |
C24 |
C23 |
H12 |
180.5 |
180.0 |
| C23 |
C24 |
C25 |
H13 |
180.0 |
180.0 |
| N02 |
C02 |
N01 |
C10 |
179.3 |
180.0 |
| N01 |
C02 |
N02 |
C03 |
179.5 |
180.0 |
| N02 |
C02 |
C03 |
C04 |
180.8 |
180.0 |
| N02 |
C02 |
C03 |
H3 |
0.8 |
0.0 |
| H1 |
N02 |
C02 |
H2 |
240.0 |
180.1 |
| C03 |
C02 |
N01 |
C10 |
358.8 |
360.0 |
| N01 |
C02 |
C03 |
N02 |
180.5 |
180.0 |
| C03 |
C02 |
N02 |
H1 |
180.5 |
180.1 |
| C03 |
C02 |
N02 |
H2 |
300.5 |
360.0 |
| C04 |
C03 |
C02 |
H3 |
180.0 |
180.0 |
| C02 |
C03 |
C04 |
H4 |
179.7 |
180.0 |
| N01 |
C10 |
C05 |
C06 |
179.7 |
180.0 |
| C07 |
C06 |
C05 |
H5 |
180.0 |
180.0 |
| C06 |
C05 |
C04 |
H4 |
0.5 |
360.0 |
| N01 |
C10 |
C05 |
C04 |
1.0 |
360.0 |
| C05 |
C04 |
C03 |
H3 |
179.7 |
180.0 |
| C03 |
C04 |
C05 |
H4 |
180.0 |
180.0 |
| C24 |
C23 |
C22 |
H11 |
179.9 |
180.0 |
| C22 |
C23 |
C24 |
H12 |
180.0 |
179.9 |
| C25 |
C24 |
C23 |
H13 |
180.0 |
180.0 |
| C02 |
C03 |
C04 |
H3 |
180.0 |
180.0 |
| C05 |
C04 |
C03 |
H4 |
180.0 |
180.0 |
| H1 |
N02 |
C02 |
C03 |
180.5 |
180.1 |
| C02 |
N02 |
H1 |
H2 |
120.0 |
179.9 |
| H2 |
N02 |
C02 |
C03 |
300.5 |
360.0 |
| C02 |
N02 |
H2 |
H1 |
240.0 |
180.1 |
| C02 |
C03 |
H3 |
C04 |
180.0 |
180.0 |
| H3 |
C03 |
C04 |
H4 |
359.6 |
360.0 |
| H4 |
C04 |
C03 |
H3 |
359.6 |
360.0 |
| H6 |
C07 |
C06 |
H5 |
358.9 |
0.0 |
| N12 |
C11 |
H8 |
H9 |
118.4 |
240.0 |
| N12 |
C11 |
H9 |
H8 |
241.6 |
120.0 |
| H10 |
N12 |
C11 |
H8 |
141.4 |
240.0 |
| H10 |
N12 |
C11 |
H9 |
260.3 |
120.0 |
| H10 |
N12 |
C21 |
C26 |
48.0 |
0.1 |
| H10 |
N12 |
C21 |
C22 |
228.4 |
180.2 |
| H11 |
C22 |
C21 |
C26 |
179.7 |
180.3 |
| C21 |
C22 |
H11 |
C23 |
180.0 |
179.9 |
| H11 |
C22 |
C23 |
C24 |
179.9 |
180.0 |
| H11 |
C22 |
C23 |
H12 |
360.0 |
359.9 |
| C22 |
C23 |
H12 |
C24 |
180.0 |
180.1 |
| H12 |
C23 |
C22 |
H11 |
360.0 |
359.9 |
| H12 |
C23 |
C24 |
H13 |
0.5 |
360.0 |
| H13 |
C24 |
C23 |
H12 |
0.5 |
360.0 |
| C21 |
C26 |
H14 |
C25 |
180.0 |
179.8 |