PDB Chemical Component M54

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M54

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N16	N15	1.380	1.400
N16	C17	1.343	1.306
N15	C14	1.375	1.348
C17	C13	1.399	1.409
O	C12	1.280	1.218
C14	C13	1.412	1.366
C13	C	1.492	1.484
C12	N	1.374	1.348
C12	C8	1.497	1.460
N	C11	1.455	1.359
C3	C	1.444	1.385
C3	C4	1.432	1.397
C	C1	1.474	1.402
C8	C4	1.444	1.459
C8	C9	1.490	1.408
C11	C10	1.376	1.358
C4	C5	1.509	1.417
C1	C2	1.447	1.360
C23	C26	1.474	1.380
C23	C22	1.496	1.395
C10	C9	1.452	1.470
C10	C22	1.529	1.482
C9	C7	1.463	1.402
C5	C2	1.447	1.404
C5	C6	1.436	1.410
C26	C24	1.444	1.383
C22	C27	1.438	1.393
C7	C6	1.400	1.355
C6	C18	1.548	1.508
C18	C19	1.488	1.529
C24	C25	1.426	1.387
C27	C25	1.466	1.386
C25	O28	1.197	1.359
C19	C20	1.464	1.530
C20	N21	1.482	1.469
C1	H1	1.080	1.080
C2	H2	1.080	1.080
C3	H3	1.080	1.080
C7	H7	1.080	1.080
C11	H11	1.080	1.080
N	HN	1.000	0.970
C14	H14	1.080	1.080
N15	HN15	1.000	0.970
C17	H17	1.080	1.080
C18	H181	1.100	1.089
C18	H182	1.100	1.090
C19	H191	1.100	1.089
C19	H192	1.100	1.091
C20	H201	1.100	1.089
C20	H202	1.100	1.090
N21	H211	1.000	1.009
N21	H212	1.000	1.009
C23	H23	1.080	1.080
C24	H24	1.080	1.080
C26	H26	1.080	1.079
C27	H27	1.080	1.080
O28	HO28	0.950	0.967

Bond Angles for M54

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N16	N15	HN15	125.4	125.9
N16	C17	H17	127.5	126.0
N15	C14	H14	127.9	126.2
C12	N	HN	117.8	118.8
N	C11	H11	121.2	119.0
C3	C4	C5	119.3	119.8
C4	C3	H3	119.8	120.2
C	C1	C2	121.7	120.9
C	C1	H1	119.2	119.6
C11	C10	C22	117.3	120.4
C4	C5	C6	120.5	119.7
C2	C1	H1	119.2	119.5
C1	C2	H2	121.0	120.0
C23	C26	C24	119.0	120.2
C26	C23	H23	118.8	120.0
C23	C26	H26	120.5	119.9
C23	C22	C27	117.6	119.8
C10	C22	C27	123.6	120.1
C9	C7	H7	118.6	119.4
C5	C2	H2	121.0	120.0
C5	C6	C18	115.7	119.3
C26	C24	H24	121.5	119.8
C22	C27	C25	117.3	119.8
C22	C27	H27	121.3	120.1
C7	C6	C18	124.2	119.3
C6	C18	C19	113.8	109.5
C6	C18	H181	108.0	109.4
C6	C18	H182	107.1	109.4
C18	C19	C20	117.5	109.5
C19	C18	H181	108.1	109.5
C19	C18	H182	107.1	109.5
C18	C19	H191	106.9	109.5
C18	C19	H192	105.0	109.5
C24	C25	O28	116.8	120.0
C25	C24	H24	121.5	119.9
C27	C25	O28	116.6	120.0
C25	O28	HO28	109.5	114.0
C19	C20	N21	105.0	109.5
C20	C19	H191	106.9	109.5
C20	C19	H192	105.0	109.5
C19	C20	H201	111.0	109.5
C19	C20	H202	111.9	109.5
N21	C20	H201	111.0	109.5
N21	C20	H202	111.9	109.4
C20	N21	H211	109.5	111.0
C20	N21	H212	109.5	111.0
H181	C18	H182	112.9	109.5
H191	C19	H192	116.0	109.4
H201	C20	H202	106.1	109.5
H211	N21	H212	109.4	111.0

Torsion Angles for M54

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N16	N15	C14	H14	180.6	180.0
C17	N16	N15	HN15	178.6	179.8
O	C12	N	HN	358.7	359.9
C13	C	C1	H1	358.3	359.7
C12	N	C11	H11	179.7	179.9
N	C11	C10	C22	182.0	180.0
C3	C	C1	H1	178.3	180.0
C3	C4	C5	C6	179.8	180.0
C2	C1	C	H1	180.0	180.1
C	C1	C2	H2	183.1	180.0
C8	C4	C3	H3	2.0	0.1
C8	C9	C7	H7	181.8	180.1
C11	C10	C22	C27	239.4	65.0
C5	C4	C3	H3	182.0	180.0
C4	C5	C2	H2	178.0	179.9
C4	C5	C6	C18	179.7	180.0
C	C1	C2	H1	180.0	179.9
C5	C2	C1	H2	180.0	179.9
C26	C23	C22	C27	4.6	0.2
C23	C26	C24	H24	182.3	179.9
C10	C22	C23	C27	175.6	179.7
C23	C22	C27	C25	355.8	359.8
C23	C22	C27	H27	175.8	179.7
C10	C9	C7	H7	1.0	360.0
C23	C22	C10	C27	184.7	180.3
C10	C22	C27	C25	180.4	180.0
C10	C22	C27	H27	0.5	0.0
C9	C7	C6	C18	179.5	180.1
C5	C2	C1	H1	183.1	180.0
C1	C2	C5	H2	180.0	180.1
C6	C5	C2	H2	357.7	360.0
C7	C6	C5	C18	181.1	180.0
C5	C6	C18	C19	124.7	85.0
C5	C6	C18	H181	244.7	205.0
C5	C6	C18	H182	6.6	325.0
C24	C26	C23	H23	176.4	180.0
C23	C26	C24	H26	180.0	179.9
C26	C24	C25	O28	180.4	180.3
C25	C24	C26	H24	180.0	179.7
C22	C27	C25	O28	180.6	180.0
C5	C6	C7	C18	178.8	180.0
C7	C6	C18	C19	303.6	265.0
C7	C6	C18	H181	63.6	25.0
C7	C6	C18	H182	185.5	145.0
C6	C18	C19	C20	302.6	180.0
C19	C18	C6	H181	240.0	240.0
C19	C18	C6	H182	118.1	120.0
C6	C18	C19	H191	62.6	300.0
C6	C18	C19	H192	186.4	60.0
H181	C18	C6	H182	238.1	240.0
C6	C18	C19	H181	120.0	120.0
C6	C18	C19	H182	241.9	240.0
C18	C19	C20	N21	180.7	180.0
C20	C19	C18	H191	240.0	240.0
C20	C19	C18	H192	116.2	120.0
C18	C19	C20	H201	300.7	300.0
C18	C19	C20	H202	59.0	60.1
H181	C18	C19	H182	121.9	120.0
H191	C19	C18	H192	236.2	240.0
C23	C26	C24	C25	2.3	359.7
C26	C24	C25	H24	180.0	180.3
C22	C27	C25	C24	3.4	0.0
C27	C25	C24	O28	177.2	180.0
C24	C25	O28	HO28	64.7	90.0
C22	C27	C25	H27	180.0	180.0
C24	C25	C27	O28	182.8	180.0
C27	C25	C24	H24	177.7	180.0
C27	C25	O28	HO28	247.2	270.0
O28	C25	C24	H24	0.4	360.0
C20	C19	C18	H181	182.6	60.0
C20	C19	C18	H182	60.7	299.9
C18	C19	C20	H191	120.0	120.0
C18	C19	C20	H192	243.8	240.0
N21	C20	C19	H201	240.0	240.0
N21	C20	C19	H202	121.6	119.9
C19	C20	N21	H211	129.4	56.1
C19	C20	N21	H212	249.3	180.0
H191	C19	C20	H192	123.8	120.0
H201	C20	C19	H202	241.7	240.0
N21	C20	C19	H191	60.7	60.0
N21	C20	C19	H192	296.9	300.0
C19	C20	N21	H201	120.0	120.1
C19	C20	N21	H202	238.3	240.0
H201	C20	N21	H202	118.3	120.0
H211	N21	C20	H212	240.0	236.0
C	C1	H1	C2	180.0	180.1
H1	C1	C2	H2	3.1	0.1
H2	C2	C1	H1	3.1	0.1
H3	C3	C4	C5	182.0	180.0
H7	C7	C6	C18	359.5	360.0
H11	C11	C10	C22	2.0	360.0
HN	N	C11	H11	359.7	0.0
HN15	N15	C14	H14	0.6	360.0
C6	C18	H181	C19	236.5	240.0
C6	C18	H181	H182	118.2	119.9
H181	C18	C19	C20	182.6	60.0
C19	C18	H181	H182	241.8	239.9
H181	C18	C19	H191	302.6	180.0
H181	C18	C19	H192	66.4	300.0
C6	C18	H182	C19	122.4	120.0
C6	C18	H182	H181	241.2	240.1
H182	C18	C19	C20	60.7	299.9
C19	C18	H182	H181	118.8	120.1
H182	C18	C19	H191	180.7	60.0
H182	C18	C19	H192	304.5	180.0
C18	C19	H191	C20	233.4	240.0
H191	C19	C18	H181	302.6	180.0
H191	C19	C18	H182	180.7	60.0
C18	C19	H191	H192	116.7	120.0
H191	C19	C20	N21	60.7	60.0
C20	C19	H191	H192	243.3	240.0
H191	C19	C20	H201	180.7	180.0
H191	C19	C20	H202	299.0	300.0
C18	C19	H192	C20	124.6	120.0
H192	C19	C18	H181	66.4	300.0
H192	C19	C18	H182	304.5	180.0
C18	C19	H192	H191	242.3	240.0
H192	C19	C20	N21	296.9	300.0
C20	C19	H192	H191	117.7	120.0
H192	C19	C20	H201	56.9	60.0
H192	C19	C20	H202	175.3	180.0
C19	C20	H201	N21	243.6	240.0
H201	C20	C19	H191	180.7	180.0
H201	C20	C19	H192	56.9	60.0
C19	C20	H201	H202	121.8	120.0
N21	C20	H201	H202	238.2	240.0
H201	C20	N21	H211	9.3	296.0
H201	C20	N21	H212	129.3	60.0
C19	C20	H202	N21	117.6	120.0
H202	C20	C19	H191	299.0	300.0
H202	C20	C19	H192	175.3	180.0
C19	C20	H202	H201	238.8	240.0
N21	C20	H202	H201	121.2	120.0
H202	C20	N21	H211	251.0	176.0
H202	C20	N21	H212	11.0	300.0
H211	N21	C20	H201	9.3	296.0
H211	N21	C20	H202	251.0	176.0
C20	N21	H211	H212	120.0	124.0
H212	N21	C20	H201	129.3	60.0
H212	N21	C20	H202	11.0	300.0
C20	N21	H212	H211	240.0	236.0
H23	C23	C26	C24	176.4	180.0
H23	C23	C26	H26	356.4	359.9
H23	C23	C22	C27	184.6	180.3
H24	C24	C25	O28	0.4	360.0
C23	C26	H26	C24	180.0	180.1
H26	C26	C23	H23	356.4	359.9
H26	C26	C24	H24	2.3	0.1
C22	C27	H27	C25	180.0	180.0
H27	C27	C25	O28	0.6	0.1