PDB Chemical Component M37
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for M37
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C6 |
1.444 |
1.383 |
| C1 |
H1 |
1.080 |
1.080 |
| F1 |
C11 |
1.312 |
1.399 |
| N1 |
C4 |
1.390 |
1.400 |
| N1 |
N6 |
1.360 |
1.401 |
| S1 |
C21 |
1.795 |
1.762 |
| S1 |
O4 |
1.423 |
1.421 |
| C2 |
C1 |
1.456 |
1.383 |
| C2 |
H2 |
1.080 |
1.080 |
| N2 |
S1 |
1.607 |
1.656 |
| N2 |
HN2 |
1.000 |
0.970 |
| N2 |
HN2A |
1.000 |
0.970 |
| C3 |
C2 |
1.459 |
1.381 |
| C3 |
C4 |
1.460 |
1.388 |
| C3 |
H3 |
1.080 |
1.080 |
| N3 |
HN3 |
1.001 |
1.009 |
| O3 |
C8 |
1.228 |
1.216 |
| C4 |
C5 |
1.451 |
1.389 |
| F4 |
C44 |
1.332 |
1.351 |
| C5 |
C6 |
1.478 |
1.382 |
| C5 |
C9 |
1.526 |
1.507 |
| N5 |
C8 |
1.368 |
1.348 |
| N5 |
HN5 |
1.000 |
0.970 |
| O5 |
S1 |
1.436 |
1.421 |
| C6 |
H6 |
1.080 |
1.080 |
| C7 |
N5 |
1.374 |
1.398 |
| C7 |
C22 |
1.452 |
1.389 |
| C8 |
C13 |
1.396 |
1.470 |
| C9 |
N3 |
1.484 |
1.469 |
| C9 |
H9 |
1.100 |
1.090 |
| C10 |
N6 |
1.347 |
1.310 |
| C10 |
C11 |
1.514 |
1.508 |
| C11 |
F2 |
1.313 |
1.399 |
| C11 |
F3 |
1.330 |
1.399 |
| C12 |
C10 |
1.422 |
1.392 |
| C12 |
H12 |
1.080 |
1.081 |
| C13 |
N1 |
1.372 |
1.369 |
| C13 |
C12 |
1.424 |
1.380 |
| C14 |
C16 |
1.452 |
1.394 |
| C14 |
C44 |
1.441 |
1.380 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
H15 |
1.080 |
1.080 |
| C16 |
C18 |
1.457 |
1.394 |
| C17 |
C15 |
1.471 |
1.394 |
| C17 |
C16 |
1.507 |
1.483 |
| C18 |
C22 |
1.445 |
1.379 |
| C18 |
H18 |
1.080 |
1.080 |
| C21 |
C17 |
1.464 |
1.393 |
| C22 |
H22 |
1.080 |
1.080 |
| C23 |
C15 |
1.458 |
1.380 |
| C23 |
H23 |
1.080 |
1.080 |
| C24 |
C21 |
1.469 |
1.381 |
| C24 |
C26 |
1.450 |
1.383 |
| C24 |
H24 |
1.080 |
1.079 |
| C26 |
C23 |
1.457 |
1.384 |
| C26 |
H26 |
1.080 |
1.080 |
| C44 |
C7 |
1.456 |
1.392 |
| N3 |
H181 |
1.000 |
1.009 |
| C9 |
H19 |
1.100 |
1.090 |
Bond Angles for M37
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
H1 |
120.9 |
119.9 |
| C2 |
C1 |
C6 |
118.2 |
120.1 |
| C1 |
C6 |
C5 |
119.1 |
120.1 |
| C1 |
C6 |
H6 |
120.4 |
120.0 |
| C2 |
C1 |
H1 |
120.9 |
119.9 |
| F1 |
C11 |
C10 |
107.3 |
109.4 |
| F1 |
C11 |
F2 |
110.3 |
109.5 |
| F1 |
C11 |
F3 |
111.5 |
109.5 |
| C4 |
N1 |
N6 |
119.8 |
126.1 |
| N1 |
C4 |
C3 |
119.6 |
120.1 |
| N1 |
C4 |
C5 |
121.0 |
120.1 |
| O4 |
S1 |
C21 |
107.2 |
106.4 |
| N2 |
S1 |
C21 |
106.9 |
107.2 |
| O5 |
S1 |
C21 |
109.6 |
106.4 |
| S1 |
C21 |
C17 |
122.7 |
120.1 |
| N2 |
S1 |
O4 |
107.3 |
106.4 |
| C3 |
C2 |
H2 |
118.1 |
120.0 |
| HN2 |
N2 |
HN2A |
109.5 |
120.0 |
| C4 |
C3 |
H3 |
121.2 |
120.1 |
| C3 |
C4 |
C5 |
119.4 |
119.9 |
| C9 |
N3 |
HN3 |
109.5 |
111.0 |
| HN3 |
N3 |
H181 |
109.4 |
111.0 |
| O3 |
C8 |
N5 |
122.6 |
120.0 |
| O3 |
C8 |
C13 |
118.4 |
120.0 |
| C4 |
C5 |
C6 |
121.9 |
119.9 |
| C4 |
C5 |
C9 |
118.3 |
120.0 |
| F4 |
C44 |
C14 |
118.3 |
120.0 |
| F4 |
C44 |
C7 |
118.8 |
120.0 |
| C6 |
C5 |
C9 |
119.8 |
120.0 |
| C5 |
C6 |
H6 |
120.5 |
120.0 |
| C5 |
C9 |
H9 |
106.7 |
109.5 |
| C5 |
C9 |
H19 |
106.7 |
109.5 |
| C8 |
N5 |
HN5 |
118.8 |
120.0 |
| C7 |
N5 |
C8 |
122.3 |
120.0 |
| N5 |
C8 |
C13 |
119.0 |
120.0 |
| C7 |
N5 |
HN5 |
118.9 |
120.0 |
| C7 |
C22 |
C18 |
117.7 |
120.1 |
| C7 |
C22 |
H22 |
121.2 |
120.0 |
| C8 |
C13 |
C12 |
123.8 |
126.5 |
| C9 |
N3 |
H181 |
109.5 |
111.0 |
| H9 |
C9 |
H19 |
112.1 |
109.5 |
| C13 |
C12 |
H12 |
127.9 |
126.1 |
| C16 |
C14 |
C44 |
117.2 |
120.0 |
| C16 |
C14 |
H14 |
121.4 |
120.0 |
| C14 |
C16 |
C18 |
120.2 |
119.9 |
| C44 |
C14 |
H14 |
121.4 |
120.0 |
| C17 |
C15 |
H15 |
120.1 |
120.0 |
| C23 |
C15 |
H15 |
120.1 |
120.0 |
| C17 |
C16 |
C18 |
122.1 |
120.0 |
| C16 |
C18 |
C22 |
122.3 |
120.0 |
| C16 |
C18 |
H18 |
118.9 |
120.0 |
| C22 |
C18 |
H18 |
118.8 |
120.0 |
| C18 |
C22 |
H22 |
121.2 |
119.9 |
| C26 |
C23 |
H23 |
118.6 |
120.0 |
| C26 |
C24 |
H24 |
120.1 |
119.9 |
| C24 |
C26 |
H26 |
121.0 |
119.9 |
Torsion Angles for M37
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.8 |
| C4 |
C5 |
C6 |
C1 |
0.4 |
360.0 |
| C1 |
C6 |
C5 |
C9 |
179.4 |
180.0 |
| C5 |
C6 |
C1 |
H6 |
180.0 |
180.3 |
| C2 |
C1 |
H1 |
C6 |
180.0 |
180.2 |
| H1 |
C1 |
C6 |
C5 |
179.9 |
180.3 |
| H1 |
C1 |
C6 |
H6 |
359.9 |
359.9 |
| N1 |
C4 |
C3 |
H3 |
359.0 |
360.0 |
| C3 |
C4 |
N1 |
C5 |
181.3 |
180.0 |
| N1 |
C4 |
C5 |
C6 |
180.8 |
180.0 |
| N1 |
C4 |
C5 |
C9 |
1.8 |
0.0 |
| N6 |
N1 |
C4 |
C3 |
266.5 |
109.2 |
| N6 |
N1 |
C4 |
C5 |
85.2 |
289.2 |
| N2 |
S1 |
C21 |
O4 |
114.9 |
113.6 |
| N2 |
S1 |
O4 |
C21 |
245.5 |
245.9 |
| O5 |
S1 |
O4 |
C21 |
125.1 |
122.9 |
| O4 |
S1 |
C21 |
C17 |
311.4 |
185.5 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
| C2 |
C1 |
C6 |
C5 |
359.9 |
0.1 |
| C2 |
C1 |
C6 |
H6 |
179.9 |
179.8 |
| H2 |
C2 |
C1 |
C6 |
179.8 |
180.0 |
| H2 |
C2 |
C1 |
H1 |
359.8 |
359.8 |
| O4 |
S1 |
N2 |
C21 |
114.8 |
113.6 |
| O5 |
S1 |
N2 |
C21 |
243.1 |
246.5 |
| N2 |
S1 |
C21 |
C17 |
66.3 |
299.1 |
| HN2 |
N2 |
S1 |
C21 |
180.0 |
359.9 |
| HN2 |
N2 |
S1 |
O4 |
294.8 |
113.5 |
| HN2A |
N2 |
S1 |
C21 |
300.0 |
180.0 |
| HN2A |
N2 |
S1 |
O4 |
54.8 |
293.6 |
| C3 |
C2 |
C1 |
C6 |
359.9 |
359.9 |
| C3 |
C2 |
C1 |
H1 |
179.9 |
179.8 |
| N1 |
C4 |
C3 |
C2 |
179.0 |
180.0 |
| C3 |
C4 |
N1 |
N6 |
266.5 |
109.2 |
| N1 |
C4 |
C3 |
C5 |
178.7 |
180.0 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
179.9 |
| C3 |
C4 |
C5 |
C6 |
359.4 |
0.0 |
| C3 |
C4 |
C5 |
C9 |
180.5 |
180.0 |
| H3 |
C3 |
C2 |
H2 |
0.1 |
359.9 |
| H3 |
C3 |
C4 |
C5 |
180.3 |
180.0 |
| C9 |
N3 |
HN3 |
H181 |
120.0 |
123.9 |
| O3 |
C8 |
N5 |
HN5 |
179.9 |
180.7 |
| C7 |
N5 |
C8 |
O3 |
359.9 |
0.6 |
| N5 |
C8 |
O3 |
C13 |
180.1 |
180.0 |
| O3 |
C8 |
C13 |
C12 |
175.2 |
356.1 |
| C1 |
C6 |
C5 |
C4 |
0.4 |
360.0 |
| C5 |
C4 |
N1 |
N6 |
85.2 |
289.2 |
| N1 |
C4 |
C5 |
C3 |
181.3 |
180.0 |
| C5 |
C4 |
C3 |
H3 |
180.3 |
180.0 |
| C6 |
C5 |
C4 |
C9 |
178.9 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
180.4 |
180.3 |
| C4 |
C5 |
C9 |
H9 |
317.7 |
320.0 |
| C4 |
C5 |
C9 |
H19 |
77.7 |
200.0 |
| C16 |
C14 |
C44 |
F4 |
178.9 |
180.0 |
| F4 |
C44 |
C14 |
H14 |
358.9 |
0.3 |
| C5 |
C6 |
C1 |
H1 |
179.9 |
180.3 |
| C1 |
C6 |
C5 |
H6 |
180.0 |
179.7 |
| C4 |
C5 |
C6 |
C9 |
181.1 |
180.0 |
| C6 |
C5 |
C9 |
H9 |
138.7 |
139.9 |
| C6 |
C5 |
C9 |
H19 |
258.7 |
20.0 |
| C5 |
C9 |
N3 |
HN3 |
180.0 |
180.0 |
| C4 |
C5 |
C9 |
C6 |
178.9 |
180.0 |
| C9 |
C5 |
C6 |
H6 |
359.4 |
0.3 |
| C5 |
C9 |
N3 |
H181 |
300.0 |
303.9 |
| H9 |
C9 |
C5 |
H19 |
240.0 |
120.0 |
| O3 |
C8 |
N5 |
C13 |
179.9 |
180.0 |
| C7 |
N5 |
C8 |
HN5 |
180.0 |
180.0 |
| N5 |
C8 |
C13 |
C12 |
355.2 |
176.1 |
| C7 |
N5 |
HN5 |
C8 |
180.0 |
180.0 |
| HN5 |
N5 |
C8 |
C13 |
360.0 |
0.7 |
| O4 |
S1 |
O5 |
C21 |
236.1 |
237.1 |
| N2 |
S1 |
O5 |
C21 |
115.1 |
114.1 |
| O5 |
S1 |
C21 |
C17 |
180.8 |
52.6 |
| H6 |
C6 |
C1 |
H1 |
359.9 |
359.9 |
| C1 |
C6 |
H6 |
C5 |
180.0 |
180.3 |
| H6 |
C6 |
C5 |
C9 |
359.4 |
0.3 |
| O3 |
C8 |
N5 |
C7 |
359.9 |
0.6 |
| F4 |
C44 |
C7 |
N5 |
359.3 |
0.0 |
| C8 |
N5 |
C7 |
HN5 |
180.0 |
180.0 |
| C7 |
N5 |
C8 |
C13 |
180.0 |
180.6 |
| F4 |
C44 |
C7 |
C22 |
180.7 |
179.7 |
| C22 |
C7 |
N5 |
C8 |
123.8 |
340.2 |
| C22 |
C7 |
N5 |
HN5 |
303.8 |
160.2 |
| C16 |
C18 |
C22 |
C7 |
359.8 |
360.0 |
| C7 |
C22 |
C18 |
H18 |
179.8 |
179.7 |
| C18 |
C22 |
C7 |
H22 |
180.0 |
180.0 |
| O3 |
C8 |
C13 |
N5 |
180.1 |
180.0 |
| C13 |
C8 |
N5 |
HN5 |
360.0 |
0.7 |
| C8 |
C13 |
C12 |
H12 |
359.8 |
359.9 |
| HN3 |
N3 |
C9 |
H181 |
240.0 |
236.1 |
| H9 |
C9 |
N3 |
HN3 |
60.0 |
300.1 |
| C5 |
C9 |
H9 |
H19 |
116.5 |
240.0 |
| H9 |
C9 |
N3 |
H181 |
180.0 |
63.9 |
| F1 |
C11 |
C10 |
N6 |
129.8 |
5.0 |
| F1 |
C11 |
C10 |
F2 |
239.5 |
120.0 |
| F1 |
C11 |
C10 |
F3 |
120.5 |
240.0 |
| F1 |
C11 |
F2 |
C10 |
118.7 |
240.0 |
| F1 |
C11 |
F2 |
F3 |
237.6 |
120.1 |
| F1 |
C11 |
F3 |
C10 |
242.2 |
120.0 |
| F1 |
C11 |
F3 |
F2 |
121.7 |
239.9 |
| C8 |
C13 |
C12 |
C10 |
179.8 |
180.2 |
| F4 |
C44 |
C14 |
C16 |
178.9 |
180.0 |
| C44 |
C14 |
C16 |
H14 |
180.0 |
180.3 |
| C17 |
C16 |
C14 |
C18 |
178.6 |
179.7 |
| C14 |
C16 |
C18 |
C22 |
359.9 |
359.8 |
| C14 |
C16 |
C18 |
H18 |
179.8 |
180.0 |
| F4 |
C44 |
C14 |
C7 |
178.7 |
180.0 |
| C16 |
C14 |
C44 |
H14 |
180.0 |
179.7 |
| C44 |
C14 |
C16 |
C18 |
0.1 |
0.3 |
| C16 |
C14 |
H14 |
C44 |
180.0 |
180.3 |
| H14 |
C14 |
C16 |
C18 |
180.1 |
180.0 |
| C7 |
C22 |
C18 |
C16 |
359.8 |
360.0 |
| C18 |
C16 |
C14 |
C44 |
0.1 |
0.3 |
| C18 |
C16 |
C14 |
H14 |
180.1 |
180.0 |
| C22 |
C18 |
C16 |
H18 |
180.0 |
179.7 |
| C16 |
C18 |
C22 |
H22 |
179.8 |
180.0 |
| S1 |
C21 |
C17 |
C15 |
179.2 |
180.0 |
| C23 |
C15 |
C17 |
H15 |
180.0 |
180.3 |
| S1 |
C21 |
C17 |
C16 |
357.0 |
360.0 |
| C17 |
C16 |
C14 |
C44 |
178.7 |
180.0 |
| C17 |
C16 |
C14 |
H14 |
358.7 |
359.8 |
| C14 |
C16 |
C17 |
C18 |
181.4 |
180.3 |
| C16 |
C17 |
C15 |
H15 |
2.4 |
360.0 |
| C17 |
C16 |
C18 |
C22 |
181.3 |
180.0 |
| C17 |
C16 |
C18 |
H18 |
1.3 |
0.3 |
| C7 |
C22 |
C18 |
H22 |
180.0 |
180.0 |
| C16 |
C18 |
C22 |
H18 |
180.0 |
180.3 |
| C16 |
C18 |
H18 |
C22 |
180.0 |
179.7 |
| H18 |
C18 |
C22 |
H22 |
359.8 |
359.7 |
| C21 |
C17 |
C15 |
H15 |
180.4 |
180.0 |
| C7 |
C22 |
H22 |
C18 |
180.0 |
180.0 |
| H22 |
C22 |
C18 |
H18 |
359.8 |
359.7 |
| C17 |
C15 |
C23 |
H15 |
180.0 |
179.7 |
| H23 |
C23 |
C15 |
H15 |
359.5 |
360.0 |
| C24 |
C26 |
C23 |
H23 |
180.4 |
180.0 |
| H24 |
C24 |
C26 |
H26 |
359.7 |
359.7 |
| C26 |
C23 |
C15 |
H15 |
179.5 |
180.0 |
| H26 |
C26 |
C23 |
H23 |
0.4 |
0.3 |
| H26 |
C26 |
C24 |
H24 |
359.7 |
359.7 |
| F4 |
C44 |
C7 |
C14 |
181.3 |
180.0 |
| C44 |
C7 |
N5 |
HN5 |
125.2 |
339.9 |
| C44 |
C7 |
C22 |
H22 |
180.5 |
180.2 |
| C9 |
N3 |
H181 |
HN3 |
240.0 |
236.1 |
| H19 |
C9 |
N3 |
HN3 |
300.0 |
60.0 |
| C5 |
C9 |
H19 |
H9 |
243.5 |
120.0 |
| H19 |
C9 |
N3 |
H181 |
60.0 |
183.9 |