PDB Chemical Component M31

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M31

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.393	1.382
C1	C6	1.400	1.382
C2	C30	1.391	1.382
CL3	C29	1.785	1.735
C4	C5	1.392	1.382
C4	C30	1.394	1.382
C5	C6	1.393	1.382
C6	C7	1.519	1.507
C7	S8	1.675	1.814
S8	N9	1.605	1.656
S8	O13	1.433	1.421
S8	O14	1.432	1.421
N9	C10	1.443	1.465
C10	C11	1.514	1.507
C11	N12	1.323	1.348
C11	O15	1.220	1.213
N12	C16	1.468	1.470
N12	C23	1.466	1.475
C16	C17	1.506	1.507
C16	C21	1.528	1.543
C17	O18	1.231	1.213
C17	N19	1.336	1.348
N19	C20	1.450	1.465
C20	C24	1.510	1.507
C21	C22	1.525	1.551
C22	C23	1.519	1.551
C24	C25	1.387	1.382
C24	C31	1.389	1.383
C25	C26	1.518	1.507
C25	C27	1.389	1.383
C26	N32	1.462	1.469
C27	C28	1.391	1.381
C28	C29	1.384	1.385
C29	C31	1.382	1.383
C1	H1	1.080	1.080
C2	H2	1.080	1.080
C4	H4	1.079	1.080
C5	H5	1.080	1.080
C7	H7	1.100	1.091
C7	H7A	1.101	1.090
N9	HN9	1.000	0.970
C10	H10	1.099	1.090
C10	H10A	1.100	1.090
C16	H16	1.100	1.090
N19	HN19	1.000	0.970
C20	H20	1.100	1.090
C20	H20A	1.100	1.090
C21	H21	1.100	1.090
C21	H21A	1.100	1.090
C22	H22	1.100	1.091
C22	H22A	1.100	1.089
C23	H23	1.100	1.090
C23	H23A	1.100	1.090
C26	H26	1.100	1.090
C26	H26A	1.100	1.090
C27	H27	1.079	1.080
C28	H28	1.080	1.080
C30	H30	1.080	1.080
C31	H31	1.080	1.079
N32	HN32	1.000	1.010
N32	HN3A	1.000	1.009

Bond Angles for M31

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	C30	119.8	120.0
C2	C1	H1	119.7	120.0
C1	C2	H2	120.1	120.0
C30	C2	H2	120.1	120.0
C2	C30	H30	120.2	120.0
CL3	C29	C31	118.3	120.1
C5	C4	H4	119.7	120.0
C4	C5	H5	120.0	120.0
C4	C30	H30	120.1	120.0
C6	C7	H7	108.4	109.5
C6	C7	H7A	108.4	109.5
C7	S8	N9	107.9	104.5
C7	S8	O13	112.4	110.5
C7	S8	O14	109.2	110.5
S8	C7	H7	108.4	109.4
S8	C7	H7A	108.4	109.5
O13	S8	N9	109.0	104.3
O14	S8	N9	108.2	104.3
S8	N9	C10	118.0	120.0
S8	N9	HN9	106.7	120.0
O13	S8	O14	110.0	121.1
N9	C10	C11	109.8	109.5
C10	N9	HN9	106.7	120.0
N9	C10	H10	109.4	109.5
N9	C10	H10A	109.4	109.5
C10	C11	N12	115.3	120.0
C10	C11	O15	119.9	120.0
C11	C10	H10	109.4	109.4
C11	C10	H10A	109.4	109.4
O15	C11	N12	124.8	120.0
C11	N12	C16	121.4	125.6
C11	N12	C23	125.8	125.6
C16	N12	C23	112.7	108.7
N12	C16	C17	113.4	109.9
N12	C16	C21	103.2	107.3
N12	C16	H16	111.2	109.9
N12	C23	C22	104.4	104.7
N12	C23	H23	111.2	110.4
N12	C23	H23A	111.2	110.4
C17	C16	C21	109.9	109.9
C16	C17	O18	122.6	120.0
C16	C17	N19	116.4	120.0
C17	C16	H16	104.7	109.9
C16	C21	C22	104.5	103.0
C21	C16	H16	114.7	110.0
C16	C21	H21	111.2	110.7
C16	C21	H21A	111.1	110.7
O18	C17	N19	121.0	120.0
C17	N19	C20	122.8	120.0
C17	N19	HN19	118.6	120.0
N19	C20	C24	114.7	109.5
C20	N19	HN19	118.6	120.0
N19	C20	H20	107.8	109.4
N19	C20	H20A	107.8	109.5
C20	C24	C25	122.0	120.0
C20	C24	C31	118.6	120.0
C24	C20	H20	107.8	109.5
C24	C20	H20A	107.8	109.5
C21	C22	C23	105.1	101.5
C22	C21	H21	111.2	110.8
C22	C21	H21A	111.1	110.7
C21	C22	H22	110.9	111.0
C21	C22	H22A	111.0	111.0
C23	C22	H22	111.0	111.2
C23	C22	H22A	110.9	110.9
C22	C23	H23	111.2	110.5
C22	C23	H23A	111.2	110.4
C25	C24	C31	119.5	120.0
C24	C25	C26	121.1	120.0
C24	C25	C27	120.9	120.0
C24	C31	C29	119.0	120.0
C24	C31	H31	120.5	120.0
C26	C25	C27	118.0	120.0
C25	C26	N32	108.9	109.4
C25	C26	H26	109.6	109.4
C25	C26	H26A	109.7	109.5
C25	C27	C28	120.1	120.0
C25	C27	H27	120.0	120.0
N32	C26	H26	109.6	109.5
N32	C26	H26A	109.6	109.5
C26	N32	HN32	109.5	111.0
C26	N32	HN3A	109.5	111.0
C27	C28	C29	118.2	120.0
C28	C27	H27	120.0	120.0
C27	C28	H28	120.9	120.0
C28	C29	C31	122.5	120.0
C29	C28	H28	120.9	120.0
C29	C31	H31	120.5	120.0
H7	C7	H7A	110.5	109.4
H10	C10	H10A	109.5	109.5
H20	C20	H20A	111.1	109.5
H21	C21	H21A	107.7	110.7
H22	C22	H22A	108.0	110.9
H23	C23	H23A	107.7	110.5
H26	C26	H26A	109.3	109.5
HN32	N32	HN3A	109.5	111.0

Torsion Angles for M31

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C30	C2	C1	H2	180.0	180.0
C1	C2	C30	H30	179.4	180.0
C1	C6	C7	H7	227.4	210.0
C1	C6	C7	H7A	347.4	330.0
C30	C2	C1	H1	180.2	179.7
C1	C2	C30	H2	180.0	180.0
C4	C30	C2	H30	180.0	180.0
C24	C31	C29	CL3	179.6	180.3
C28	C29	CL3	C31	179.4	179.8
CL3	C29	C28	H28	1.3	360.0
CL3	C29	C31	H31	359.6	0.1
C5	C4	C30	H30	180.8	180.0
C4	C30	C2	H2	179.5	180.0
C2	C30	C4	H30	180.0	180.0
C5	C6	C7	H7	47.9	30.0
C5	C6	C7	H7A	168.0	149.9
C6	C7	S8	N9	301.8	180.0
C6	C7	S8	O13	62.1	291.6
C6	C7	S8	O14	184.4	68.4
S8	C7	C6	H7	240.0	240.0
S8	C7	C6	H7A	120.0	120.0
H7	C7	C6	H7A	240.0	240.0
C6	C7	S8	H7	120.0	120.0
C6	C7	S8	H7A	240.0	240.0
O13	S8	C7	N9	120.3	111.6
O14	S8	C7	N9	242.6	248.4
C7	S8	N9	C10	100.6	65.0
C7	S8	N9	HN9	220.6	245.0
O13	S8	C7	O14	237.7	223.2
H7	C7	S8	H7A	120.0	119.9
C7	S8	N9	O13	122.3	116.0
C7	S8	N9	O14	241.9	243.9
N9	S8	C7	H7	181.8	60.0
N9	S8	C7	H7A	61.8	300.0
O13	S8	N9	O14	119.6	127.9
S8	N9	C10	C11	181.0	165.0
C10	N9	S8	HN9	240.0	180.0
S8	N9	C10	H10	301.0	285.0
S8	N9	C10	H10A	60.9	45.0
C7	S8	O13	N9	240.4	248.3
C7	S8	O13	O14	121.9	131.5
O13	S8	C7	H7	302.1	171.5
O13	S8	C7	H7A	182.1	51.6
O14	S8	O13	N9	118.5	116.8
O13	S8	N9	C10	338.2	309.0
O13	S8	N9	HN9	98.2	129.0
C7	S8	O14	N9	117.2	111.7
C7	S8	O14	O13	236.3	228.5
O14	S8	C7	H7	64.4	308.3
O14	S8	C7	H7A	304.4	188.4
O13	S8	O14	N9	241.0	243.2
O14	S8	N9	C10	218.6	181.1
O14	S8	N9	HN9	338.6	1.1
S8	N9	C10	HN9	120.0	180.0
N9	C10	C11	N12	169.1	180.0
N9	C10	C11	O15	350.3	360.0
C11	C10	N9	H10	240.0	240.0
C11	C10	N9	H10A	120.0	120.0
H10	C10	N9	H10A	240.0	240.0
C11	C10	N9	HN9	60.9	345.0
N9	C10	C11	H10	120.0	120.0
N9	C10	C11	H10A	240.0	240.0
O15	C11	C10	N12	181.2	180.0
C10	C11	N12	C16	179.1	180.0
C10	C11	N12	C23	1.9	359.7
H10	C10	C11	H10A	120.0	120.0
C10	C11	N12	O15	181.3	180.0
N12	C11	C10	H10	49.1	60.0
N12	C11	C10	H10A	289.1	300.1
C16	N12	C11	C23	177.2	180.3
C11	N12	C16	C17	317.1	300.4
C11	N12	C16	C21	198.2	181.0
C11	N12	C16	H16	74.8	61.5
C11	N12	C23	C22	181.2	155.9
C11	N12	C23	H23	301.2	274.7
C11	N12	C23	H23A	61.2	37.1
C10	C11	O15	N12	178.7	180.0
O15	C11	C10	H10	230.3	240.0
O15	C11	C10	H10A	110.3	120.0
O15	C11	N12	C16	357.8	0.0
O15	C11	N12	C23	180.6	179.7
C11	N12	C16	C23	182.5	179.7
C16	N12	C23	C22	3.8	335.6
C16	N12	C23	H23	123.8	94.4
C16	N12	C23	H23A	243.8	216.8
C17	C16	N12	C21	118.9	119.4
N12	C16	C17	O18	313.5	360.0
N12	C16	C17	N19	132.8	180.0
C17	C16	N12	H16	242.3	239.0
N12	C16	C21	C22	331.3	22.2
C21	C16	N12	H16	123.4	119.5
N12	C16	C21	H21	91.3	140.6
N12	C16	C21	H21A	211.3	263.8
C11	N12	C23	C16	177.4	180.3
C23	N12	C16	C17	134.6	120.7
C23	N12	C16	C21	15.7	1.3
C23	N12	C16	H16	252.3	241.7
C21	C22	C23	N12	338.0	37.3
N12	C23	C22	H22	218.0	279.2
N12	C23	C22	H22A	98.0	155.3
C22	C23	N12	H23	240.0	241.1
C22	C23	N12	H23A	120.0	118.8
H23	C23	N12	H23A	240.0	237.6
C17	C16	N12	C23	134.6	120.7
N12	C16	C17	C21	245.1	242.2
N12	C16	C17	H16	121.4	121.0
C17	C16	C21	C22	210.0	262.8
C21	C16	C17	H16	236.4	238.8
C17	C16	C21	H21	330.0	21.2
C17	C16	C21	H21A	90.0	144.4
O18	C17	C16	N19	180.6	180.0
C16	C17	N19	C20	179.1	180.0
C16	C17	N19	HN19	359.2	359.9
C21	C16	N12	C23	15.7	1.3
N12	C16	C21	C17	121.3	119.4
N12	C16	C21	H16	238.9	240.5
C21	C16	C17	O18	68.4	117.8
C21	C16	C17	N19	247.8	297.8
C17	C16	C21	H16	117.6	121.1
C16	C21	C22	C23	31.8	324.3
C22	C21	C16	H21	240.0	241.6
C22	C21	C16	H21A	120.0	118.4
C16	C21	C22	H22	151.8	82.6
C16	C21	C22	H22A	271.8	206.4
H21	C21	C16	H21A	240.0	236.8
O18	C17	C16	C21	68.4	117.8
C16	C17	O18	N19	179.3	180.0
O18	C17	C16	H16	192.0	239.0
O18	C17	N19	C20	358.5	0.1
O18	C17	N19	HN19	178.5	180.0
N19	C17	C16	C21	247.8	297.8
C16	C17	N19	O18	180.6	180.0
N19	C17	C16	H16	11.4	59.0
C17	N19	C20	C24	107.7	180.0
C20	N19	C17	HN19	180.0	180.1
C17	N19	C20	H20	227.7	300.0
C17	N19	C20	H20A	347.7	59.9
C17	N19	C20	HN19	180.0	179.9
N19	C20	C24	C25	256.3	80.0
N19	C20	C24	C31	77.3	259.7
C24	C20	N19	H20	240.0	240.0
C24	C20	N19	H20A	120.0	120.0
H20	C20	N19	H20A	240.0	240.0
C24	C20	N19	HN19	287.7	0.1
N19	C20	C24	H20	120.0	120.0
N19	C20	C24	H20A	240.0	240.0
C25	C24	C20	C31	179.0	180.3
C20	C24	C25	C26	1.6	359.9
C20	C24	C25	C27	180.8	180.0
C20	C24	C31	C29	178.6	179.8
C20	C24	C31	H31	358.6	360.0
H20	C20	C24	H20A	120.0	120.0
N12	C23	C22	C21	338.0	37.3
C22	C21	C16	H16	92.4	141.7
C16	C21	C22	H21	120.0	118.4
C16	C21	C22	H21A	240.0	241.6
C23	C22	C21	H22	240.0	241.8
C23	C22	C21	H22A	120.0	117.9
C21	C22	C23	H23	218.0	278.5
C21	C22	C23	H23A	98.0	156.0
H21	C21	C22	H21A	120.0	123.2
H22	C22	C21	H22A	240.0	236.2
N12	C23	C22	H23	120.0	118.8
N12	C23	C22	H23A	240.0	241.2
C23	C22	C21	H21	271.8	205.9
C23	C22	C21	H21A	151.8	82.7
C21	C22	C23	H22	120.0	118.1
C21	C22	C23	H22A	240.0	242.0
H22	C22	C23	H22A	120.0	123.9
H23	C23	C22	H23A	120.0	122.4
C20	C24	C25	C31	181.0	179.7
C25	C24	C20	H20	136.3	320.1
C25	C24	C20	H20A	16.4	200.0
C25	C24	C31	C29	359.6	359.5
C25	C24	C31	H31	179.6	179.7
C26	C25	C24	C27	180.9	179.9
C24	C25	C26	N32	103.7	80.0
C24	C25	C26	H26	223.6	200.0
C24	C25	C26	H26A	343.7	320.1
C24	C25	C27	C28	1.2	360.0
C24	C25	C27	H27	181.1	180.0
CL3	C29	C31	C24	179.6	180.3
C20	C24	C31	C25	179.0	180.3
C31	C24	C20	H20	317.3	139.7
C31	C24	C20	H20A	197.4	19.7
C31	C24	C25	C26	180.6	180.2
C31	C24	C25	C27	359.7	0.3
C28	C29	C31	C24	0.2	0.5
C29	C31	C24	H31	180.0	179.8
C26	C25	C24	C31	180.6	180.2
C24	C25	C26	C27	179.1	180.1
C26	C25	C27	C28	180.3	180.0
C26	C25	C27	H27	0.3	0.1
N32	C26	C25	H26	240.0	240.0
N32	C26	C25	H26A	120.0	120.0
C25	C26	N32	HN32	180.0	56.0
C25	C26	N32	HN3A	300.0	180.0
H26	C26	C25	H26A	240.0	240.0
C27	C25	C24	C31	359.7	0.3
C24	C25	C27	C26	180.8	179.9
C27	C25	C26	N32	284.5	260.0
C27	C25	C26	H26	44.5	19.9
C27	C25	C26	H26A	164.5	140.0
C25	C27	C28	C29	358.6	0.0
C28	C27	C25	H27	180.0	179.9
C25	C27	C28	H28	178.6	180.0
N32	C26	C25	C27	284.5	260.0
C25	C26	N32	H26	120.0	120.0
C25	C26	N32	H26A	240.0	240.0
H26	C26	N32	H26A	120.0	120.1
HN32	N32	C26	HN3A	240.0	236.0
C25	C27	C28	H27	180.0	180.1
C27	C28	C29	C31	0.7	359.7
C29	C28	C27	H28	180.0	180.0
CL3	C29	C28	C31	180.6	180.2
C24	C31	C29	C28	0.2	0.5
C29	C28	C27	H27	178.7	180.0
C27	C28	C29	H28	180.0	180.0
C28	C29	C31	H31	180.2	180.3
C24	C31	C29	H31	180.0	180.2
C31	C29	C28	H28	180.7	179.8
H1	C1	C2	C30	180.2	179.7
H1	C1	C2	H2	0.2	359.7
C1	C2	H2	C30	180.0	180.0
H2	C2	C1	H1	0.2	359.7
H2	C2	C30	H30	359.5	360.0
H4	C4	C5	H5	359.2	360.0
H4	C4	C30	H30	0.8	0.0
H5	C5	C4	H4	359.2	360.0
C6	C7	H7	H7A	118.7	120.0
H7	C7	S8	N9	181.8	60.0
H7	C7	S8	O13	302.1	171.5
H7	C7	S8	O14	64.4	308.3
S8	C7	H7	H7A	241.4	240.0
C6	C7	H7A	H7	241.3	240.0
H7A	C7	S8	N9	61.8	300.0
H7A	C7	S8	O13	182.1	51.6
H7A	C7	S8	O14	304.4	188.4
S8	C7	H7A	H7	118.6	119.9
S8	N9	HN9	C10	233.0	180.0
HN9	N9	C10	C11	60.9	345.0
HN9	N9	C10	H10	181.0	105.0
HN9	N9	C10	H10A	300.9	225.0
N9	C10	H10	C11	239.8	240.0
H10	C10	N9	HN9	181.0	105.0
N9	C10	H10	H10A	119.9	120.1
H10	C10	C11	N12	49.1	60.0
H10	C10	C11	O15	230.3	240.0
C11	C10	H10	H10A	240.1	240.0
N9	C10	H10A	C11	120.2	120.0
H10A	C10	N9	HN9	300.9	225.0
N9	C10	H10A	H10	240.1	240.0
H10A	C10	C11	N12	289.1	300.1
H10A	C10	C11	O15	110.3	120.0
C11	C10	H10A	H10	119.9	120.0
H16	C16	N12	C23	252.3	241.7
N12	C16	H16	C17	237.1	239.0
N12	C16	H16	C21	116.6	117.9
C17	C16	H16	C21	239.5	238.9
H16	C16	C17	O18	192.0	239.0
H16	C16	C17	N19	11.4	59.0
H16	C16	C21	C22	92.4	141.7
H16	C16	C21	H21	212.4	260.1
H16	C16	C21	H21A	332.4	23.3
C17	N19	HN19	C20	180.0	180.1
HN19	N19	C20	C24	287.7	0.1
HN19	N19	C20	H20	47.7	120.1
HN19	N19	C20	H20A	167.7	240.0
N19	C20	H20	C24	235.7	240.0
H20	C20	N19	HN19	47.7	120.1
N19	C20	H20	H20A	117.9	119.9
H20	C20	C24	C25	136.3	320.1
H20	C20	C24	C31	317.3	139.7
C24	C20	H20	H20A	242.2	239.9
N19	C20	H20A	C24	124.3	120.0
H20A	C20	N19	HN19	167.7	240.0
N19	C20	H20A	H20	242.1	240.1
H20A	C20	C24	C25	16.4	200.0
H20A	C20	C24	C31	197.4	19.7
C24	C20	H20A	H20	117.8	120.0
C16	C21	H21	C22	244.0	246.4
H21	C21	C16	H16	212.4	260.1
C16	C21	H21	H21A	122.0	123.2
H21	C21	C22	C23	271.8	205.9
C22	C21	H21	H21A	238.0	236.8
H21	C21	C22	H22	31.8	324.2
H21	C21	C22	H22A	151.8	88.0
C16	C21	H21A	C22	116.0	113.6
H21A	C21	C16	H16	332.4	23.3
C16	C21	H21A	H21	238.0	236.8
H21A	C21	C22	C23	151.8	82.7
C22	C21	H21A	H21	122.0	123.2
H21A	C21	C22	H22	271.8	201.0
H21A	C21	C22	H22A	31.8	324.8
C21	C22	H22	C23	243.5	247.8
H22	C22	C21	H21	31.8	324.2
H22	C22	C21	H21A	271.8	201.0
C21	C22	H22	H22A	121.8	123.9
C23	C22	H22	H22A	238.2	236.1
H22	C22	C23	H23	98.0	160.4
H22	C22	C23	H23A	338.0	37.9
C21	C22	H22A	C23	116.5	112.1
H22A	C22	C21	H21	151.8	88.0
H22A	C22	C21	H21A	31.8	324.8
C21	C22	H22A	H22	238.3	236.1
C23	C22	H22A	H22	121.8	124.0
H22A	C22	C23	H23	338.0	36.5
H22A	C22	C23	H23A	218.0	274.1
N12	C23	H23	C22	244.1	244.7
N12	C23	H23	H23A	122.0	122.3
H23	C23	C22	H22	98.0	160.4
H23	C23	C22	H22A	338.0	36.5
C22	C23	H23	H23A	237.9	237.6
N12	C23	H23A	C22	115.9	115.2
N12	C23	H23A	H23	237.9	237.7
H23A	C23	C22	H22	338.0	37.9
H23A	C23	C22	H22A	218.0	274.1
C22	C23	H23A	H23	122.1	122.4
H26	C26	C25	C27	44.5	19.9
C25	C26	H26	N32	240.4	240.1
C25	C26	H26	H26A	120.2	120.0
N32	C26	H26	H26A	239.8	239.9
H26	C26	N32	HN32	60.0	296.1
H26	C26	N32	HN3A	180.0	60.0
H26A	C26	C25	C27	164.5	140.0
C25	C26	H26A	N32	119.6	120.0
C25	C26	H26A	H26	239.8	240.0
N32	C26	H26A	H26	120.2	120.1
H26A	C26	N32	HN32	300.0	176.0
H26A	C26	N32	HN3A	60.0	300.0
C25	C27	H27	C28	180.0	179.9
H27	C27	C28	C29	178.7	180.0
H27	C27	C28	H28	358.6	359.9
C27	C28	H28	C29	180.0	180.0
H28	C28	C27	H27	358.6	359.9
H28	C28	C29	C31	180.7	179.8
H30	C30	C2	H2	359.5	360.0
C24	C31	H31	C29	180.0	179.8
HN32	N32	C26	H26	60.0	296.1
HN32	N32	C26	H26A	300.0	176.0
C26	N32	HN32	HN3A	120.0	124.0
HN3A	N32	C26	H26	180.0	60.0
HN3A	N32	C26	H26A	60.0	300.0
C26	N32	HN3A	HN32	240.0	236.0