PDB Chemical Component M1V

Ideal Model

Chemical Description

Name mesobiliverdin IX(alpha)
Formula C33 H38 N4 O6
Formal charge 0
Molecular weight 586.678 g/mol
Component type NON-POLYMER

Chemical features

Atom count 81
Chiral atom count 0
Bond count 84
Aromatic bond count 5

Chemical Identifiers

Systematic name (OpenEye OEToolkits) 3-[5-[(Z)-(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[(Z)-[5-[(Z)-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CCC1=C(C)\C(NC1=O)=C\C2=NC(=C\c3[nH]c(\C=C4/NC(=O)C(=C4CC)C)c(C)c3CCC(O)=O)/C(=C2C)CCC(O)=O
SMILES (CACTVS) CCC1=C(C)C(NC1=O)=CC2=NC(=Cc3[nH]c(C=C4NC(=O)C(=C4CC)C)c(C)c3CCC(O)=O)C(=C2C)CCC(O)=O
Stereo SMILES (OpenEye) CCC1=C(/C(=C/C2=N/C(=C\c3c(c(c([nH]3)/C=C\4/C(=C(C(=O)N4)C)CC)C)CCC(=O)O)/C(=C2C)CCC(=O)O)/NC1=O)C
InChI descriptor InChI=1S/C33H38N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h13-15,35H,7-12H2,1-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b26-13-,27-14-,28-15-
InChIKey descriptor CXQHEXWJGZEPFP-BBROENKCSA-N

Status Information

Last modified 2014-06-13
Created 2013-07-31
Release status REL
Model PDB code 4LMS
Processing site RCSB