PDB Chemical Component M12

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M12

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.231	1.208
C1	C2	1.545	1.507
C1	OXT	1.343	1.341
C2	C3	1.580	1.530
C3	C4	1.592	1.529
C4	C5	1.551	1.530
C5	C6	1.539	1.531
C6	C7	1.546	1.530
C7	C8	1.544	1.531
C8	C9	1.560	1.530
C9	C10	1.559	1.530
C10	C11	1.607	1.530
C10	C12	1.586	1.531
C2	H21C	1.100	1.090
C2	H22C	1.100	1.090
OXT	HXT	0.950	0.967
C3	H31C	1.100	1.090
C3	H32C	1.100	1.091
C4	H41C	1.099	1.090
C4	H42C	1.100	1.090
C5	H51C	1.100	1.089
C5	H52C	1.100	1.089
C6	H61C	1.100	1.090
C6	H62C	1.100	1.090
C7	H71C	1.100	1.090
C7	H72C	1.100	1.091
C8	H81C	1.100	1.089
C8	H82C	1.100	1.090
C9	H91C	1.100	1.090
C9	H92C	1.100	1.090
C10	H10	1.100	1.090
C11	H111	1.100	1.090
C11	H112	1.100	1.090
C11	H113	1.100	1.090
C12	H121	1.100	1.090
C12	H122	1.100	1.091
C12	H123	1.100	1.090

Bond Angles for M12

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	118.5	119.9
O1	C1	OXT	123.4	120.0
C2	C1	OXT	118.1	120.0
C1	C2	C3	109.2	109.5
C1	C2	H21C	109.6	109.4
C1	C2	H22C	109.6	109.5
C1	OXT	HXT	109.5	117.0
C2	C3	C4	112.3	109.5
C3	C2	H21C	109.5	109.5
C3	C2	H22C	109.6	109.4
C2	C3	H31C	108.6	109.5
C2	C3	H32C	107.9	109.5
C3	C4	C5	116.1	109.5
C4	C3	H31C	108.5	109.5
C4	C3	H32C	107.9	109.4
C3	C4	H41C	107.3	109.5
C3	C4	H42C	105.8	109.5
C4	C5	C6	111.6	109.5
C5	C4	H41C	107.3	109.5
C5	C4	H42C	105.8	109.4
C4	C5	H51C	108.8	109.5
C4	C5	H52C	108.3	109.5
C5	C6	C7	111.2	109.4
C6	C5	H51C	108.8	109.5
C6	C5	H52C	108.3	109.4
C5	C6	H61C	108.9	109.5
C5	C6	H62C	108.6	109.5
C6	C7	C8	110.3	109.4
C7	C6	H61C	108.9	109.5
C7	C6	H62C	108.5	109.5
C6	C7	H71C	109.2	109.5
C6	C7	H72C	109.0	109.5
C7	C8	C9	110.8	109.5
C8	C7	H71C	109.2	109.5
C8	C7	H72C	109.0	109.4
C7	C8	H81C	109.0	109.5
C7	C8	H82C	108.7	109.4
C8	C9	C10	115.7	109.5
C9	C8	H81C	109.0	109.5
C9	C8	H82C	108.7	109.5
C8	C9	H91C	107.5	109.5
C8	C9	H92C	106.0	109.4
C9	C10	C11	113.1	109.5
C9	C10	C12	114.5	109.5
C10	C9	H91C	107.4	109.5
C10	C9	H92C	106.0	109.5
C9	C10	H10	103.9	109.5
C11	C10	C12	111.6	109.5
C11	C10	H10	107.3	109.4
C10	C11	H111	109.5	109.4
C10	C11	H112	109.5	109.5
C10	C11	H113	109.5	109.5
C12	C10	H10	105.5	109.5
C10	C12	H121	109.5	109.4
C10	C12	H122	109.4	109.5
C10	C12	H123	109.5	109.4
H21C	C2	H22C	109.3	109.4
H31C	C3	H32C	111.7	109.4
H41C	C4	H42C	114.9	109.4
H51C	C5	H52C	111.2	109.5
H61C	C6	H62C	110.8	109.4
H71C	C7	H72C	110.2	109.5
H81C	C8	H82C	110.6	109.5
H91C	C9	H92C	114.5	109.4
H111	C11	H112	109.5	109.4
H111	C11	H113	109.4	109.5
H112	C11	H113	109.5	109.5
H121	C12	H122	109.5	109.5
H121	C12	H123	109.4	109.5
H122	C12	H123	109.5	109.5

Torsion Angles for M12

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	OXT	179.6	180.3
O1	C1	C2	C3	280.4	0.0
O1	C1	C2	H21C	40.3	120.0
O1	C1	C2	H22C	160.2	240.0
O1	C1	OXT	HXT	360.0	0.0
O1	C1	C2	OXT	180.4	179.7
C2	C1	OXT	HXT	180.4	179.8
C1	C2	C3	C4	316.8	180.0
C3	C2	C1	H21C	240.0	240.0
C3	C2	C1	H22C	120.1	120.0
C1	C2	C3	H31C	76.8	300.0
C1	C2	C3	H32C	198.0	60.0
H21C	C2	C1	H22C	240.1	240.0
O1	C1	OXT	C2	179.6	180.3
OXT	C1	C2	C3	100.0	180.3
OXT	C1	C2	H21C	220.0	300.3
OXT	C1	C2	H22C	339.9	60.3
C3	C2	C1	OXT	100.0	180.3
C1	C2	C3	H21C	120.0	120.0
C1	C2	C3	H22C	239.9	239.9
C2	C3	C4	C5	186.1	180.0
C4	C3	C2	H31C	240.0	239.9
C4	C3	C2	H32C	118.8	120.0
C2	C3	C4	H41C	306.1	300.0
C2	C3	C4	H42C	69.2	60.0
H21C	C2	C3	H22C	119.9	119.9
H31C	C3	C2	H32C	238.8	240.0
C4	C3	C2	H21C	196.8	60.0
C4	C3	C2	H22C	76.9	300.0
C2	C3	C4	H31C	120.0	120.1
C2	C3	C4	H32C	241.2	240.0
C3	C4	C5	C6	183.3	180.0
C5	C4	C3	H41C	240.0	240.0
C5	C4	C3	H42C	116.9	120.0
C3	C4	C5	H51C	303.3	300.0
C3	C4	C5	H52C	64.2	60.1
H31C	C3	C4	H32C	121.2	119.9
H41C	C4	C3	H42C	236.9	240.0
C5	C4	C3	H31C	66.1	59.9
C5	C4	C3	H32C	304.9	300.0
C3	C4	C5	H41C	120.0	120.0
C3	C4	C5	H42C	243.0	240.0
C4	C5	C6	C7	300.6	180.0
C6	C5	C4	H51C	240.0	240.0
C6	C5	C4	H52C	119.1	120.0
C4	C5	C6	H61C	60.5	300.0
C4	C5	C6	H62C	181.3	60.0
H41C	C4	C5	H42C	123.1	120.0
H51C	C5	C4	H52C	239.1	239.9
C6	C5	C4	H41C	63.3	60.0
C6	C5	C4	H42C	300.2	300.0
C4	C5	C6	H51C	120.0	120.0
C4	C5	C6	H52C	240.9	240.0
C5	C6	C7	C8	178.3	180.0
C7	C6	C5	H61C	240.0	240.0
C7	C6	C5	H62C	119.3	120.0
C5	C6	C7	H71C	298.3	300.0
C5	C6	C7	H72C	58.7	60.0
H51C	C5	C6	H52C	120.9	120.1
H61C	C6	C5	H62C	239.2	240.0
C7	C6	C5	H51C	180.5	60.0
C7	C6	C5	H52C	59.6	300.0
C5	C6	C7	H61C	120.0	120.0
C5	C6	C7	H62C	240.7	240.0
C6	C7	C8	C9	157.1	180.0
C8	C7	C6	H71C	240.0	240.0
C8	C7	C6	H72C	119.7	119.9
C6	C7	C8	H81C	277.1	300.0
C6	C7	C8	H82C	37.7	60.1
H61C	C6	C7	H62C	120.7	120.0
H71C	C7	C6	H72C	239.6	240.0
C8	C7	C6	H61C	58.4	60.0
C8	C7	C6	H62C	297.6	300.0
C6	C7	C8	H71C	120.0	120.0
C6	C7	C8	H72C	240.4	240.0
C7	C8	C9	C10	148.5	180.1
C9	C8	C7	H81C	240.0	240.0
C9	C8	C7	H82C	119.4	119.9
C7	C8	C9	H91C	268.5	300.0
C7	C8	C9	H92C	31.3	60.0
H71C	C7	C8	H72C	120.4	120.0
H81C	C8	C7	H82C	239.4	239.9
C9	C8	C7	H71C	37.2	60.0
C9	C8	C7	H72C	276.8	300.0
C7	C8	C9	H81C	120.0	120.0
C7	C8	C9	H82C	240.6	240.1
C8	C9	C10	C11	273.1	175.0
C8	C9	C10	C12	42.5	295.0
C10	C9	C8	H91C	240.0	240.0
C10	C9	C8	H92C	117.2	120.0
C8	C9	C10	H10	157.1	55.0
H81C	C8	C9	H82C	120.6	120.1
H91C	C9	C8	H92C	237.1	240.0
C10	C9	C8	H81C	28.5	60.0
C10	C9	C8	H82C	268.0	300.0
C8	C9	C10	H91C	120.0	120.0
C8	C9	C10	H92C	242.8	240.0
C11	C10	C9	C12	230.6	240.0
C11	C10	C9	H10	116.0	120.0
C9	C10	C11	H111	313.2	60.0
C9	C10	C11	H112	73.3	180.0
C9	C10	C11	H113	193.3	300.0
C12	C10	C9	H10	245.4	240.0
C9	C10	C12	H121	200.3	300.0
C9	C10	C12	H122	320.3	60.0
C9	C10	C12	H123	80.3	180.0
H91C	C9	C10	H92C	122.8	120.0
C9	C10	C11	C12	130.8	120.0
C11	C10	C9	H91C	153.1	55.0
C11	C10	C9	H92C	30.3	295.0
C9	C10	C11	H10	246.0	240.0
C12	C10	C11	H10	115.2	120.0
C11	C10	C12	H121	330.4	60.0
C11	C10	C12	H122	90.4	180.0
C11	C10	C12	H123	210.4	300.0
H111	C11	C10	H112	240.0	240.0
H111	C11	C10	H113	119.9	120.0
H112	C11	C10	H113	240.0	240.0
C9	C10	C12	C11	229.9	240.0
C12	C10	C9	H91C	282.5	175.0
C12	C10	C9	H92C	159.7	55.0
C9	C10	C12	H10	113.6	120.0
C11	C10	C12	H10	243.7	240.0
C12	C10	C11	H111	182.4	300.0
C12	C10	C11	H112	302.4	60.0
C12	C10	C11	H113	62.5	180.0
H121	C12	C10	H122	240.0	240.0
H121	C12	C10	H123	120.0	120.0
H122	C12	C10	H123	240.0	240.0
H21C	C2	C1	OXT	220.0	300.3
C1	C2	H21C	C3	240.2	240.0
C1	C2	H21C	H22C	120.1	120.0
H21C	C2	C3	C4	196.8	60.0
C3	C2	H21C	H22C	239.9	240.1
H21C	C2	C3	H31C	316.8	180.0
H21C	C2	C3	H32C	78.0	300.0
H22C	C2	C1	OXT	339.9	60.3
C1	C2	H22C	C3	119.9	120.1
C1	C2	H22C	H21C	239.9	240.0
H22C	C2	C3	C4	76.9	300.0
C3	C2	H22C	H21C	120.1	120.0
H22C	C2	C3	H31C	196.9	60.1
H22C	C2	C3	H32C	318.1	180.0
C2	C3	H31C	C4	237.7	239.9
H31C	C3	C2	H21C	316.8	180.0
H31C	C3	C2	H22C	196.9	60.1
C2	C3	H31C	H32C	118.9	120.0
H31C	C3	C4	C5	66.1	59.9
C4	C3	H31C	H32C	241.2	240.1
H31C	C3	C4	H41C	186.1	180.0
H31C	C3	C4	H42C	309.2	300.0
C2	C3	H32C	C4	121.6	120.0
H32C	C3	C2	H21C	78.0	300.0
H32C	C3	C2	H22C	318.1	180.0
C2	C3	H32C	H31C	240.8	240.0
H32C	C3	C4	C5	304.9	300.0
C4	C3	H32C	H31C	119.2	120.0
H32C	C3	C4	H41C	64.9	60.0
H32C	C3	C4	H42C	188.0	180.0
C3	C4	H41C	C5	234.5	240.0
H41C	C4	C3	H31C	186.1	180.0
H41C	C4	C3	H32C	64.9	60.0
C3	C4	H41C	H42C	117.3	120.0
H41C	C4	C5	C6	63.3	60.0
C5	C4	H41C	H42C	242.7	240.0
H41C	C4	C5	H51C	183.3	180.0
H41C	C4	C5	H52C	304.2	300.0
C3	C4	H42C	C5	123.7	120.0
H42C	C4	C3	H31C	309.2	300.0
H42C	C4	C3	H32C	188.0	180.0
C3	C4	H42C	H41C	241.9	240.0
H42C	C4	C5	C6	300.2	300.0
C5	C4	H42C	H41C	118.1	120.0
H42C	C4	C5	H51C	60.2	60.0
H42C	C4	C5	H52C	181.2	180.1
C4	C5	H51C	C6	238.2	240.0
H51C	C5	C4	H41C	183.3	180.0
H51C	C5	C4	H42C	60.2	60.0
C4	C5	H51C	H52C	119.1	120.0
H51C	C5	C6	C7	180.5	60.0
C6	C5	H51C	H52C	240.9	240.0
H51C	C5	C6	H61C	300.5	180.0
H51C	C5	C6	H62C	61.3	300.0
C4	C5	H52C	C6	121.2	120.0
H52C	C5	C4	H41C	304.2	300.0
H52C	C5	C4	H42C	181.2	180.1
C4	C5	H52C	H51C	240.6	240.0
H52C	C5	C6	C7	59.6	300.0
C6	C5	H52C	H51C	119.4	120.0
H52C	C5	C6	H61C	179.6	60.0
H52C	C5	C6	H62C	300.4	180.0
C5	C6	H61C	C7	238.6	240.0
H61C	C6	C5	H51C	300.5	180.0
H61C	C6	C5	H52C	179.6	60.0
C5	C6	H61C	H62C	119.4	120.0
H61C	C6	C7	C8	58.4	60.0
C7	C6	H61C	H62C	240.7	240.0
H61C	C6	C7	H71C	178.3	180.0
H61C	C6	C7	H72C	298.7	300.0
C5	C6	H62C	C7	120.9	120.0
H62C	C6	C5	H51C	61.3	300.0
H62C	C6	C5	H52C	300.4	180.0
C5	C6	H62C	H61C	240.4	240.0
H62C	C6	C7	C8	297.6	300.0
C7	C6	H62C	H61C	119.5	120.0
H62C	C6	C7	H71C	57.6	60.0
H62C	C6	C7	H72C	178.0	180.0
C6	C7	H71C	C8	239.3	240.0
H71C	C7	C6	H61C	178.3	180.0
H71C	C7	C6	H62C	57.6	60.0
C6	C7	H71C	H72C	119.6	120.0
H71C	C7	C8	C9	37.2	60.0
C8	C7	H71C	H72C	240.3	240.0
H71C	C7	C8	H81C	157.1	180.0
H71C	C7	C8	H82C	277.7	300.0
C6	C7	H72C	C8	120.4	120.0
H72C	C7	C6	H61C	298.7	300.0
H72C	C7	C6	H62C	178.0	180.0
C6	C7	H72C	H71C	240.2	240.0
H72C	C7	C8	C9	276.8	300.0
C8	C7	H72C	H71C	119.8	120.0
H72C	C7	C8	H81C	36.7	60.0
H72C	C7	C8	H82C	157.3	180.0
C7	C8	H81C	C9	238.9	240.0
H81C	C8	C7	H71C	157.1	180.0
H81C	C8	C7	H72C	36.7	60.0
C7	C8	H81C	H82C	119.5	120.0
H81C	C8	C9	C10	28.5	60.0
C9	C8	H81C	H82C	240.6	240.0
H81C	C8	C9	H91C	148.5	180.0
H81C	C8	C9	H92C	271.4	300.0
C7	C8	H82C	C9	120.8	119.9
H82C	C8	C7	H71C	277.7	300.0
H82C	C8	C7	H72C	157.3	180.0
C7	C8	H82C	H81C	240.4	240.0
H82C	C8	C9	C10	268.0	300.0
C9	C8	H82C	H81C	119.6	120.0
H82C	C8	C9	H91C	27.9	59.9
H82C	C8	C9	H92C	150.8	179.9
C8	C9	H91C	C10	234.9	240.0
H91C	C9	C8	H81C	148.5	180.0
H91C	C9	C8	H82C	27.9	59.9
C8	C9	H91C	H92C	117.5	120.0
H91C	C9	C10	C11	153.1	55.0
H91C	C9	C10	C12	282.5	175.0
C10	C9	H91C	H92C	242.6	240.0
H91C	C9	C10	H10	37.1	295.0
C8	C9	H92C	C10	123.5	120.0
H92C	C9	C8	H81C	271.4	300.0
H92C	C9	C8	H82C	150.8	179.9
C8	C9	H92C	H91C	241.7	240.0
H92C	C9	C10	C11	30.3	295.0
H92C	C9	C10	C12	159.7	55.0
C10	C9	H92C	H91C	118.2	120.0
H92C	C9	C10	H10	274.3	175.0
C9	C10	H10	C11	120.0	120.0
C9	C10	H10	C12	239.2	240.0
H10	C10	C9	H91C	37.1	295.0
H10	C10	C9	H92C	274.3	175.0
C11	C10	H10	C12	119.2	120.0
H10	C10	C11	H111	67.2	180.0
H10	C10	C11	H112	187.2	300.0
H10	C10	C11	H113	307.2	60.0
H10	C10	C12	H121	86.7	180.0
H10	C10	C12	H122	206.7	300.0
H10	C10	C12	H123	326.7	60.0
H111	C11	C10	C12	182.4	300.0
H111	C11	C10	H10	67.2	180.0
C10	C11	H111	H112	120.0	120.0
C10	C11	H111	H113	240.0	240.0
H112	C11	H111	H113	120.0	120.0
H112	C11	C10	C12	302.4	60.0
H112	C11	C10	H10	187.2	300.0
C10	C11	H112	H111	240.0	240.0
C10	C11	H112	H113	120.0	120.0
H111	C11	H112	H113	240.0	240.0
H113	C11	C10	C12	62.5	180.0
H113	C11	C10	H10	307.2	60.0
C10	C11	H113	H111	120.0	120.0
C10	C11	H113	H112	240.0	239.9
H111	C11	H113	H112	120.0	120.0
H121	C12	C10	H10	86.7	180.0
C10	C12	H121	H122	120.0	120.0
C10	C12	H121	H123	240.0	240.1
H122	C12	H121	H123	120.0	120.1
H122	C12	C10	H10	206.7	300.0
C10	C12	H122	H121	240.0	240.0
C10	C12	H122	H123	120.0	119.9
H121	C12	H122	H123	240.0	239.9
H123	C12	C10	H10	326.7	60.0
C10	C12	H123	H121	120.0	119.9
C10	C12	H123	H122	240.0	240.0
H121	C12	H123	H122	120.0	120.1