PDB Chemical Component M0N
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for M0N
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O |
C9 |
1.449 |
1.427 |
O |
HO |
0.950 |
0.972 |
C9 |
P2 |
1.819 |
1.828 |
C9 |
C8 |
1.361 |
1.547 |
C9 |
P1 |
1.806 |
1.850 |
C8 |
C2 |
1.494 |
1.510 |
C8 |
H81 |
1.100 |
1.097 |
C8 |
H82 |
1.100 |
1.098 |
C2 |
C1 |
1.368 |
1.352 |
C2 |
N2 |
1.433 |
1.352 |
C1 |
N1 |
1.374 |
1.371 |
C1 |
H1 |
1.081 |
1.081 |
N1 |
C7 |
1.369 |
1.317 |
C7 |
N2 |
1.417 |
1.393 |
C7 |
C6 |
1.394 |
1.425 |
C6 |
C5 |
1.365 |
1.347 |
C6 |
H6 |
1.080 |
1.085 |
C5 |
C4 |
1.397 |
1.454 |
C5 |
H5 |
1.080 |
1.085 |
C4 |
C3 |
1.379 |
1.343 |
C4 |
H4 |
1.080 |
1.082 |
C3 |
N2 |
1.395 |
1.392 |
C3 |
H3 |
1.080 |
1.083 |
P1 |
O3 |
1.547 |
1.501 |
P1 |
O1 |
1.543 |
1.616 |
P1 |
O2 |
1.480 |
1.617 |
O2 |
HO2 |
0.950 |
0.982 |
O1 |
HO1 |
0.950 |
0.980 |
P2 |
O6 |
1.578 |
1.499 |
P2 |
O5 |
1.497 |
1.617 |
P2 |
O4 |
1.518 |
1.616 |
O5 |
HO5 |
0.950 |
0.981 |
O4 |
HO4 |
0.950 |
0.981 |
Bond Angles for M0N
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
O |
HO |
109.5 |
107.4 |
O |
C9 |
P2 |
107.6 |
103.4 |
O |
C9 |
C8 |
118.1 |
109.1 |
O |
C9 |
P1 |
102.6 |
102.6 |
C8 |
C9 |
P2 |
105.9 |
113.4 |
P1 |
C9 |
P2 |
115.8 |
119.6 |
C9 |
P2 |
O6 |
102.8 |
115.7 |
C9 |
P2 |
O5 |
113.5 |
103.4 |
C9 |
P2 |
O4 |
109.0 |
103.1 |
C8 |
C9 |
P1 |
107.2 |
107.7 |
C9 |
C8 |
C2 |
128.2 |
115.3 |
C9 |
C8 |
H81 |
103.6 |
108.4 |
C9 |
C8 |
H82 |
99.3 |
109.6 |
C9 |
P1 |
O3 |
102.7 |
113.7 |
C9 |
P1 |
O1 |
104.8 |
103.9 |
C9 |
P1 |
O2 |
116.9 |
104.2 |
C2 |
C8 |
H81 |
103.7 |
109.5 |
C2 |
C8 |
H82 |
99.2 |
107.8 |
C8 |
C2 |
C1 |
129.1 |
129.7 |
C8 |
C2 |
N2 |
125.2 |
122.6 |
H81 |
C8 |
H82 |
125.7 |
105.9 |
C1 |
C2 |
N2 |
105.8 |
107.7 |
C2 |
C1 |
N1 |
110.5 |
110.2 |
C2 |
C1 |
H1 |
124.7 |
128.6 |
C2 |
N2 |
C7 |
107.6 |
105.6 |
C2 |
N2 |
C3 |
133.6 |
130.8 |
N1 |
C1 |
H1 |
124.7 |
121.2 |
C1 |
N1 |
C7 |
109.0 |
105.3 |
N1 |
C7 |
N2 |
107.1 |
111.2 |
N1 |
C7 |
C6 |
131.4 |
131.7 |
C6 |
C7 |
N2 |
121.5 |
117.0 |
C7 |
N2 |
C3 |
118.8 |
123.6 |
C7 |
C6 |
C5 |
117.8 |
119.7 |
C7 |
C6 |
H6 |
121.1 |
119.4 |
C5 |
C6 |
H6 |
121.1 |
120.9 |
C6 |
C5 |
C4 |
122.1 |
121.6 |
C6 |
C5 |
H5 |
118.9 |
120.7 |
C4 |
C5 |
H5 |
118.9 |
117.7 |
C5 |
C4 |
C3 |
120.2 |
119.1 |
C5 |
C4 |
H4 |
119.9 |
119.1 |
C3 |
C4 |
H4 |
119.9 |
121.9 |
C4 |
C3 |
N2 |
119.6 |
119.1 |
C4 |
C3 |
H3 |
120.2 |
122.5 |
N2 |
C3 |
H3 |
120.2 |
118.5 |
O3 |
P1 |
O1 |
104.7 |
115.1 |
O2 |
P1 |
O3 |
107.7 |
115.3 |
O2 |
P1 |
O1 |
118.3 |
103.2 |
P1 |
O1 |
HO1 |
109.5 |
119.0 |
P1 |
O2 |
HO2 |
109.5 |
118.9 |
O5 |
P2 |
O6 |
109.0 |
114.5 |
O6 |
P2 |
O4 |
107.4 |
115.5 |
O5 |
P2 |
O4 |
114.3 |
103.0 |
P2 |
O5 |
HO5 |
109.5 |
119.0 |
P2 |
O4 |
HO4 |
109.5 |
118.9 |
Torsion Angles for M0N
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
C9 |
O |
P2 |
119.7 |
239.0 |
P1 |
C9 |
O |
P2 |
237.3 |
125.0 |
O |
C9 |
P2 |
O6 |
94.9 |
302.0 |
O |
C9 |
P2 |
O5 |
337.3 |
68.0 |
O |
C9 |
P2 |
O4 |
208.6 |
175.0 |
C8 |
C9 |
O |
P1 |
242.4 |
114.0 |
O |
C9 |
C8 |
C2 |
61.2 |
60.0 |
O |
C9 |
C8 |
H81 |
181.2 |
183.1 |
O |
C9 |
C8 |
H82 |
311.6 |
298.2 |
O |
C9 |
P1 |
O3 |
147.4 |
175.1 |
O |
C9 |
P1 |
O1 |
38.2 |
301.0 |
O |
C9 |
P1 |
O2 |
265.1 |
48.7 |
HO |
O |
C9 |
P2 |
162.4 |
298.7 |
HO |
O |
C9 |
C8 |
282.1 |
177.7 |
HO |
O |
C9 |
P1 |
39.7 |
63.7 |
P2 |
C9 |
O |
HO |
162.4 |
298.7 |
O |
C9 |
P2 |
C8 |
127.2 |
242.0 |
O |
C9 |
P2 |
P1 |
245.9 |
113.1 |
C8 |
C9 |
P2 |
P1 |
118.7 |
231.2 |
P2 |
C9 |
C8 |
C2 |
181.8 |
305.3 |
P2 |
C9 |
C8 |
H81 |
301.8 |
68.5 |
P2 |
C9 |
C8 |
H82 |
72.2 |
183.6 |
P2 |
C9 |
P1 |
O3 |
30.5 |
288.6 |
P2 |
C9 |
P1 |
O1 |
281.3 |
54.5 |
P2 |
C9 |
P1 |
O2 |
148.2 |
162.3 |
O5 |
P2 |
C9 |
O6 |
242.4 |
126.0 |
O6 |
P2 |
C9 |
O4 |
246.3 |
127.0 |
O5 |
P2 |
C9 |
O4 |
128.7 |
253.0 |
C9 |
P2 |
O5 |
HO5 |
345.4 |
181.8 |
C9 |
P2 |
O4 |
HO4 |
191.4 |
178.0 |
C8 |
C9 |
O |
HO |
282.1 |
177.7 |
O |
C9 |
C8 |
P2 |
239.4 |
114.6 |
O |
C9 |
C8 |
P1 |
115.2 |
249.3 |
P1 |
C9 |
C8 |
P2 |
124.3 |
225.3 |
C8 |
C9 |
P2 |
O6 |
327.7 |
60.0 |
C8 |
C9 |
P2 |
O5 |
210.1 |
186.0 |
C8 |
C9 |
P2 |
O4 |
81.4 |
293.0 |
C8 |
C9 |
P1 |
O3 |
272.5 |
60.0 |
C8 |
C9 |
P1 |
O1 |
163.3 |
185.9 |
C8 |
C9 |
P1 |
O2 |
30.2 |
293.7 |
C2 |
C8 |
C9 |
H81 |
240.0 |
236.9 |
C2 |
C8 |
C9 |
H82 |
109.6 |
121.8 |
C9 |
C8 |
C2 |
C1 |
308.2 |
90.1 |
C9 |
C8 |
C2 |
N2 |
128.5 |
270.0 |
H81 |
C8 |
C9 |
H82 |
229.6 |
244.9 |
P1 |
C9 |
O |
HO |
39.7 |
63.7 |
O |
C9 |
P1 |
P2 |
116.9 |
246.5 |
O |
C9 |
P1 |
C8 |
234.9 |
115.1 |
C8 |
C9 |
P1 |
P2 |
242.0 |
131.4 |
P1 |
C9 |
P2 |
O6 |
209.0 |
188.9 |
P1 |
C9 |
P2 |
O5 |
91.4 |
314.8 |
P1 |
C9 |
P2 |
O4 |
322.7 |
61.9 |
P1 |
C9 |
C8 |
C2 |
306.0 |
170.6 |
P1 |
C9 |
C8 |
H81 |
66.0 |
293.8 |
P1 |
C9 |
C8 |
H82 |
196.4 |
48.9 |
O3 |
P1 |
C9 |
O1 |
109.2 |
234.1 |
O2 |
P1 |
C9 |
O3 |
117.7 |
233.7 |
O2 |
P1 |
C9 |
O1 |
226.9 |
107.8 |
C9 |
P1 |
O1 |
HO1 |
219.7 |
183.0 |
C9 |
P1 |
O2 |
HO2 |
4.2 |
177.2 |
C2 |
C8 |
C9 |
P2 |
181.8 |
305.3 |
C2 |
C8 |
C9 |
P1 |
306.0 |
170.6 |
C9 |
C8 |
C2 |
H81 |
120.0 |
122.6 |
C9 |
C8 |
C2 |
H82 |
250.4 |
237.3 |
H81 |
C8 |
C2 |
H82 |
130.4 |
114.7 |
C1 |
C2 |
C8 |
N2 |
179.7 |
180.1 |
C8 |
C2 |
C1 |
N1 |
180.1 |
180.0 |
C8 |
C2 |
C1 |
H1 |
0.0 |
359.9 |
C8 |
C2 |
N2 |
C7 |
180.0 |
180.0 |
C8 |
C2 |
N2 |
C3 |
359.4 |
360.0 |
H81 |
C8 |
C9 |
P2 |
301.8 |
68.5 |
H81 |
C8 |
C9 |
P1 |
66.0 |
293.8 |
C9 |
C8 |
H81 |
C2 |
224.4 |
233.4 |
C9 |
C8 |
H81 |
H82 |
112.2 |
117.5 |
C2 |
C8 |
H81 |
H82 |
247.8 |
244.1 |
H81 |
C8 |
C2 |
C1 |
188.2 |
327.5 |
H81 |
C8 |
C2 |
N2 |
8.5 |
147.5 |
H82 |
C8 |
C9 |
P2 |
72.2 |
183.6 |
H82 |
C8 |
C9 |
P1 |
196.4 |
48.9 |
C9 |
C8 |
H82 |
C2 |
131.4 |
126.2 |
C9 |
C8 |
H82 |
H81 |
245.7 |
243.3 |
C2 |
C8 |
H82 |
H81 |
114.3 |
117.1 |
H82 |
C8 |
C2 |
C1 |
57.8 |
212.8 |
H82 |
C8 |
C2 |
N2 |
238.1 |
32.7 |
C1 |
C2 |
C8 |
H81 |
188.2 |
327.5 |
C1 |
C2 |
C8 |
H82 |
57.8 |
212.8 |
C8 |
C2 |
C1 |
N2 |
180.3 |
179.9 |
C1 |
C2 |
N2 |
C7 |
0.2 |
360.0 |
C1 |
C2 |
N2 |
C3 |
179.7 |
179.9 |
N1 |
C1 |
C2 |
H1 |
180.0 |
180.1 |
C2 |
C1 |
N1 |
C7 |
0.1 |
360.0 |
N2 |
C2 |
C8 |
H81 |
8.5 |
147.5 |
N2 |
C2 |
C8 |
H82 |
238.1 |
32.7 |
C8 |
C2 |
N2 |
C1 |
179.8 |
180.0 |
N2 |
C2 |
C1 |
N1 |
359.8 |
0.0 |
N2 |
C2 |
C1 |
H1 |
179.8 |
179.9 |
N1 |
C7 |
N2 |
C2 |
359.8 |
0.0 |
C6 |
C7 |
N2 |
C2 |
179.6 |
180.0 |
C7 |
N2 |
C2 |
C3 |
180.5 |
180.1 |
C4 |
C3 |
N2 |
C2 |
179.6 |
180.0 |
C2 |
N2 |
C3 |
H3 |
359.6 |
0.1 |
N1 |
C1 |
C2 |
N2 |
359.8 |
0.0 |
C2 |
C1 |
N1 |
H1 |
180.0 |
179.9 |
C1 |
N1 |
C7 |
N2 |
0.0 |
0.0 |
C1 |
N1 |
C7 |
C6 |
180.3 |
180.0 |
H1 |
C1 |
C2 |
N2 |
179.8 |
179.9 |
C2 |
C1 |
H1 |
N1 |
180.0 |
180.1 |
H1 |
C1 |
N1 |
C7 |
180.1 |
180.1 |
C2 |
N2 |
C7 |
N1 |
359.8 |
0.0 |
C7 |
N1 |
C1 |
H1 |
180.1 |
180.1 |
C6 |
C7 |
N1 |
N2 |
180.3 |
180.0 |
N1 |
C7 |
N2 |
C3 |
180.3 |
180.1 |
N1 |
C7 |
C6 |
C5 |
180.2 |
180.0 |
N1 |
C7 |
C6 |
H6 |
0.2 |
360.0 |
C2 |
N2 |
C7 |
C3 |
179.6 |
180.0 |
N1 |
C7 |
N2 |
C6 |
180.2 |
180.0 |
N2 |
C7 |
C6 |
C5 |
0.5 |
360.0 |
N2 |
C7 |
C6 |
H6 |
180.5 |
180.0 |
C4 |
C3 |
N2 |
C7 |
359.0 |
360.0 |
C7 |
N2 |
C3 |
H3 |
179.0 |
180.0 |
C2 |
N2 |
C7 |
C6 |
179.6 |
180.0 |
N1 |
C7 |
C6 |
N2 |
179.7 |
180.0 |
C6 |
C7 |
N2 |
C3 |
0.1 |
0.0 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C7 |
C6 |
C5 |
C4 |
359.9 |
0.0 |
C7 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
N2 |
0.5 |
360.0 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
C3 |
359.1 |
360.0 |
C6 |
C5 |
C4 |
H4 |
179.0 |
180.0 |
H6 |
C6 |
C7 |
N2 |
180.5 |
180.0 |
C7 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
C4 |
179.9 |
180.0 |
H6 |
C6 |
C5 |
H5 |
359.9 |
360.0 |
C4 |
C5 |
C6 |
H6 |
179.9 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
N2 |
1.5 |
0.0 |
C5 |
C4 |
C3 |
H3 |
181.5 |
180.0 |
H5 |
C5 |
C6 |
H6 |
359.9 |
360.0 |
C6 |
C5 |
H5 |
C4 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
C3 |
179.1 |
180.0 |
H5 |
C5 |
C4 |
H4 |
359.0 |
360.0 |
C2 |
N2 |
C3 |
C4 |
179.6 |
180.0 |
C7 |
N2 |
C3 |
C4 |
359.0 |
360.0 |
C3 |
C4 |
C5 |
H5 |
179.1 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
N2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
H5 |
359.0 |
360.0 |
C5 |
C4 |
H4 |
C3 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
N2 |
181.5 |
180.0 |
H4 |
C4 |
C3 |
H3 |
1.5 |
360.0 |
C2 |
N2 |
C3 |
C7 |
180.6 |
180.1 |
N2 |
C3 |
C4 |
H4 |
181.5 |
180.0 |
C4 |
C3 |
N2 |
H3 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
H4 |
1.5 |
360.0 |
C4 |
C3 |
H3 |
N2 |
180.0 |
180.0 |
O3 |
P1 |
C9 |
P2 |
30.5 |
288.6 |
C9 |
P1 |
O3 |
O1 |
250.7 |
119.7 |
C9 |
P1 |
O3 |
O2 |
123.9 |
239.8 |
O2 |
P1 |
O3 |
O1 |
126.8 |
239.9 |
O3 |
P1 |
O1 |
HO1 |
112.0 |
308.0 |
O3 |
P1 |
O2 |
HO2 |
119.1 |
51.9 |
O1 |
P1 |
C9 |
P2 |
281.3 |
54.5 |
C9 |
P1 |
O1 |
O3 |
107.7 |
235.0 |
C9 |
P1 |
O1 |
O2 |
227.7 |
108.5 |
O2 |
P1 |
O1 |
O3 |
240.1 |
126.5 |
O1 |
P1 |
O2 |
HO2 |
237.4 |
285.5 |
O2 |
P1 |
C9 |
P2 |
148.2 |
162.3 |
C9 |
P1 |
O2 |
O3 |
245.1 |
125.3 |
C9 |
P1 |
O2 |
O1 |
126.8 |
251.7 |
O3 |
P1 |
O2 |
O1 |
241.7 |
126.4 |
O2 |
P1 |
O1 |
HO1 |
352.0 |
74.5 |
HO2 |
O2 |
P1 |
O3 |
119.1 |
51.9 |
HO2 |
O2 |
P1 |
O1 |
237.4 |
285.5 |
C9 |
P2 |
O6 |
O5 |
239.3 |
120.2 |
C9 |
P2 |
O6 |
O4 |
114.9 |
239.5 |
O5 |
P2 |
O6 |
O4 |
235.6 |
119.3 |
O6 |
P2 |
O5 |
HO5 |
231.5 |
308.6 |
O6 |
P2 |
O4 |
HO4 |
302.0 |
50.9 |
C9 |
P2 |
O5 |
O6 |
113.9 |
233.2 |
C9 |
P2 |
O5 |
O4 |
234.1 |
107.1 |
O6 |
P2 |
O5 |
O4 |
120.2 |
233.9 |
O5 |
P2 |
O4 |
HO4 |
63.1 |
285.4 |
C9 |
P2 |
O4 |
O6 |
249.3 |
127.2 |
C9 |
P2 |
O4 |
O5 |
128.2 |
252.6 |
O5 |
P2 |
O4 |
O6 |
121.1 |
234.5 |
O4 |
P2 |
O5 |
HO5 |
111.3 |
74.7 |
HO5 |
O5 |
P2 |
O6 |
231.5 |
308.6 |
HO5 |
O5 |
P2 |
O4 |
111.3 |
74.7 |