PDB Chemical Component M07

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M07

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O3 C3 1.434 1.429
O4 C4 1.435 1.428
C3 C4 1.535 1.532
C3 C2 1.542 1.533
C4 C5 1.545 1.531
O2 C2 1.434 1.429
C2 C1 1.546 1.522
O6 C6 1.436 1.429
C5 C6 1.535 1.530
C5 O5 1.453 1.431
C1 O5 1.444 1.420
C1 O7 1.436 1.436
C1 C7 1.532 1.541
O7 N1 1.428 1.416
C7 C8 1.528 1.518
N1 C8 1.331 1.293
C8 C9 1.403 1.474
C10 C9 1.395 1.398
C10 C11 1.399 1.378
C9 C14 1.399 1.397
C11 C12 1.394 1.389
C14 C13 1.399 1.378
C12 C13 1.404 1.390
C12 O8 1.372 1.358
O8 C15 1.439 1.429
C15 H151 1.101 1.090
C15 H152 1.100 1.091
C15 H153 1.100 1.090
C11 H11 1.080 1.080
C10 H10 1.080 1.080
C13 H13 1.081 1.080
C14 H14 1.080 1.081
C7 H71 1.100 1.090
C7 H72 1.100 1.090
C5 H5 1.100 1.089
C6 H61 1.100 1.090
C6 H62 1.100 1.090
O6 HO6 0.950 0.967
C4 H4 1.100 1.091
O4 HO4 0.950 0.967
C3 H3 1.100 1.091
O3 HO3 0.950 0.967
C2 H2 1.100 1.090
O2 HO2 0.950 0.967

Bond Angles for M07

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O3 C3 C2 109.3 109.6
O3 C3 H3 109.7 109.6
O4 C4 H4 109.0 109.6
C3 C4 H4 108.0 109.4
C2 C3 H3 108.7 109.6
C3 C2 H2 107.9 109.4
C4 C5 H5 105.9 109.5
O2 C2 H2 109.6 109.5
O6 C6 H61 109.5 109.5
O6 C6 H62 109.5 109.5
C6 C5 H5 108.5 109.5
C5 C6 H61 109.5 109.5
C5 C6 H62 109.5 109.5
C1 C7 H71 111.5 110.8
C1 C7 H72 112.8 111.0
C10 C9 C14 119.5 119.8
C9 C10 H10 119.9 120.0
C10 C11 H11 119.7 120.0
C9 C14 H14 119.9 120.0
C11 C12 C13 119.2 120.2
C14 C13 H13 119.9 120.0
C12 C13 H13 119.9 120.0
O8 C15 H151 109.5 109.4
O8 C15 H152 109.4 109.5
O8 C15 H153 109.5 109.5
H151 C15 H152 109.4 109.5
H151 C15 H153 109.5 109.5
H152 C15 H153 109.5 109.5
H71 C7 H72 105.0 110.7
H61 C6 H62 109.4 109.5

Torsion Angles for M07

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 C3 C4 H4 53.3 57.6
C2 C3 O3 H3 240.8 239.7
O3 C3 C2 H2 306.7 304.3
C3 C4 O4 H4 118.4 120.1
O4 C4 C5 H5 303.0 301.8
O4 C4 C3 H4 241.0 239.8
C3 C4 C5 H5 65.6 61.8
O3 C3 C2 H3 119.8 120.3
C2 C3 C4 H4 292.1 297.7
O2 C2 C3 H2 119.3 120.1
C6 C5 C4 H5 118.8 120.1
C4 C5 C6 H61 290.8 304.9
C4 C5 C6 H62 170.8 64.9
O2 C2 C3 H3 306.2 304.0
C3 C2 O2 H2 241.8 240.0
C2 C1 C7 H71 254.8 336.1
C2 C1 C7 H72 12.6 212.7
O6 C6 C5 H5 168.1 305.0
C5 C6 O6 H61 240.0 120.0
C5 C6 O6 H62 120.0 240.0
H61 C6 O6 H62 240.0 120.0
C4 C5 C6 H5 242.7 239.9
O6 C6 C5 H61 120.0 240.0
O6 C6 C5 H62 240.0 120.0
H61 C6 C5 H62 120.0 240.0
O5 C1 C7 H71 16.5 99.8
O5 C1 C7 H72 134.4 336.3
O7 C1 C7 H71 134.8 218.1
O7 C1 C7 H72 252.7 94.7
H71 C7 C1 H72 242.2 123.4
C8 C9 C10 H10 358.9 0.0
C8 C9 C14 H14 1.4 0.3
C9 C10 C11 H11 179.6 180.0
C10 C9 C14 H14 179.5 180.1
C10 C11 C12 C13 0.0 0.1
C14 C9 C10 H10 180.7 180.2
C9 C14 C13 H13 180.0 180.4
C11 C12 C13 H13 180.2 179.7
C10 C9 C14 C13 359.5 359.6
C12 C13 C14 H13 180.0 180.0
C14 C13 C12 H13 180.0 180.0
C12 O8 C15 H151 167.0 60.0
C12 O8 C15 H152 286.9 180.0
C12 O8 C15 H153 46.9 300.0
H151 C15 O8 H152 240.0 240.0
H151 C15 O8 H153 120.0 120.0
H152 C15 O8 H153 240.0 240.0
O8 C15 H151 H152 120.0 120.0
O8 C15 H151 H153 240.0 240.0
H152 C15 H151 H153 120.0 120.0
O8 C15 H152 H151 240.0 240.0
O8 C15 H152 H153 120.0 120.1
H151 C15 H152 H153 240.0 240.0
O8 C15 H153 H151 120.0 120.0
O8 C15 H153 H152 240.0 240.0
H151 C15 H153 H152 120.0 120.0
H11 C11 C12 C13 180.0 180.0
H10 C10 C9 C14 180.7 180.2
H10 C10 C11 H11 359.5 0.0
H14 C14 C13 H13 0.0 360.0
C1 C7 H71 H72 122.4 236.4
C1 C7 H72 H71 238.4 123.5
H5 C5 C6 H61 48.1 65.0
H5 C5 C6 H62 288.1 184.9
O6 C6 H61 H62 120.0 240.0
H61 C6 C5 H5 48.1 65.0
C5 C6 H61 H62 239.9 120.0
O6 C6 H62 H61 240.0 120.0
H62 C6 C5 H5 288.1 184.9
C5 C6 H62 H61 120.1 240.0
HO6 O6 C6 H61 41.6 60.0
HO6 O6 C6 H62 161.5 300.0
H4 C4 C5 H5 184.0 181.7
HO4 O4 C4 H4 133.1 60.0
O3 C3 H3 C2 240.5 239.7
H3 C3 C4 H4 173.0 177.8
H3 C3 C2 H2 186.9 184.0
HO3 O3 C3 C2 204.7 179.5
HO3 O3 C3 H3 323.9 299.8
H2 C2 C3 H3 186.9 184.0
HO2 O2 C2 H2 243.4 60.0