PDB Chemical Component M04

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for M04

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.473	1.473
N1	C8	1.473	1.473
N1	C16	1.438	1.438
C2	C3	1.523	1.523
C3	C4	1.530	1.530
C5	N6	1.489	1.489
C5	C4	1.541	1.541
C7	C8	1.524	1.524
C7	C4	1.534	1.534
C9	C10	1.387	1.387
C9	C15	1.385	1.385
C9	C13	1.505	1.505
C10	C11	1.380	1.380
C11	C12	1.381	1.381
C12	CL1	1.735	1.735
C12	C14	1.383	1.383
C14	C15	1.379	1.379
C16	N17	1.345	1.345
C16	C24	1.401	1.401
N17	C18	1.337	1.337
C18	N19	1.334	1.334
C13	C4	1.536	1.536
N19	C20	1.340	1.340
C20	N21	1.364	1.364
C20	C24	1.382	1.382
N21	C22	1.355	1.355
C22	C23	1.372	1.372
C23	C24	1.428	1.428
C2	H2C1	1.100	1.100
C2	H2C2	1.100	1.100
C8	H8C1	1.100	1.100
C8	H8C2	1.100	1.100
C3	H3C1	1.099	1.099
C3	H3C2	1.100	1.100
C5	H5C1	1.100	1.100
C5	H5C2	1.100	1.100
N6	H6N1	1.000	1.000
N6	H6N2	1.000	1.000
C7	H7C1	1.100	1.100
C7	H7C2	1.100	1.100
C10	H10	1.080	1.080
C15	H15	1.080	1.080
C13	H131	1.100	1.100
C13	H132	1.100	1.100
C11	H11	1.080	1.080
C14	H14	1.080	1.080
C18	H18	1.080	1.080
N21	H21	1.000	1.000
C22	H22	1.080	1.080
C23	H23	1.080	1.080

Bond Angles for M04

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C8	113.1	113.1
C2	N1	C16	118.6	118.6
N1	C2	C3	111.9	111.9
N1	C2	H2C1	108.7	108.7
N1	C2	H2C2	108.1	108.1
C8	N1	C16	114.4	114.4
N1	C8	C7	111.3	111.3
N1	C8	H8C1	108.9	108.9
N1	C8	H8C2	108.5	108.5
N1	C16	N17	116.9	116.9
N1	C16	C24	124.3	124.3
C2	C3	C4	112.2	112.2
C3	C2	H2C1	108.7	108.7
C3	C2	H2C2	108.1	108.1
C2	C3	H3C1	108.6	108.6
C2	C3	H3C2	107.9	107.9
C3	C4	C5	111.1	111.1
C3	C4	C7	106.5	106.5
C3	C4	C13	113.3	113.3
C4	C3	H3C1	108.6	108.6
C4	C3	H3C2	108.0	108.0
N6	C5	C4	111.8	111.8
N6	C5	H5C1	108.7	108.7
N6	C5	H5C2	108.2	108.2
C5	N6	H6N1	109.5	109.5
C5	N6	H6N2	109.4	109.4
C5	C4	C7	107.6	107.6
C5	C4	C13	107.6	107.6
C4	C5	H5C1	108.7	108.7
C4	C5	H5C2	108.2	108.2
C8	C7	C4	112.9	112.9
C7	C8	H8C1	108.9	108.8
C7	C8	H8C2	108.5	108.5
C8	C7	H7C1	108.3	108.3
C8	C7	H7C2	107.6	107.6
C7	C4	C13	110.6	110.6
C4	C7	H7C1	108.3	108.3
C4	C7	H7C2	107.6	107.6
C10	C9	C15	119.0	119.0
C10	C9	C13	120.4	120.4
C9	C10	C11	120.5	120.5
C9	C10	H10	119.8	119.8
C15	C9	C13	120.5	120.5
C9	C15	C14	120.5	120.5
C9	C15	H15	119.7	119.7
C9	C13	C4	117.2	117.2
C9	C13	H131	107.0	107.0
C9	C13	H132	105.2	105.2
C10	C11	C12	120.1	120.1
C11	C10	H10	119.7	119.7
C10	C11	H11	119.9	119.9
C11	C12	CL1	120.0	120.0
C11	C12	C14	119.7	119.7
C12	C11	H11	119.9	119.9
CL1	C12	C14	120.3	120.3
C12	C14	C15	120.1	120.1
C12	C14	H14	119.9	119.9
C14	C15	H15	119.7	119.7
C15	C14	H14	120.0	120.0
N17	C16	C24	118.8	118.8
C16	N17	C18	118.0	118.0
C16	C24	C20	116.8	116.8
C16	C24	C23	136.7	136.7
N17	C18	N19	128.6	128.6
N17	C18	H18	115.7	115.7
C18	N19	C20	111.8	111.8
N19	C18	H18	115.7	115.7
C4	C13	H131	107.0	107.0
C4	C13	H132	105.2	105.2
N19	C20	N21	125.8	125.8
N19	C20	C24	125.9	125.9
N21	C20	C24	108.2	108.2
C20	N21	C22	109.7	109.7
C20	N21	H21	125.1	125.1
C20	C24	C23	106.4	106.4
N21	C22	C23	108.5	108.5
C22	N21	H21	125.2	125.2
N21	C22	H22	125.8	125.8
C22	C23	C24	107.2	107.2
C23	C22	H22	125.7	125.7
C22	C23	H23	126.4	126.4
C24	C23	H23	126.4	126.4
H2C1	C2	H2C2	111.4	111.4
H8C1	C8	H8C2	110.9	110.9
H3C1	C3	H3C2	111.7	111.7
H5C1	C5	H5C2	111.3	111.3
H6N1	N6	H6N2	109.4	109.4
H7C1	C7	H7C2	112.2	112.2
H131	C13	H132	115.7	115.7

Torsion Angles for M04

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C8	N1	C2	C16	138.0	138.0
C2	N1	C8	C7	52.9	52.9
C2	N1	C8	H8C1	172.9	172.9
C2	N1	C8	H8C2	293.6	293.6
C2	N1	C16	N17	138.4	138.4
C2	N1	C16	C24	317.2	317.2
N1	C2	C3	C4	56.1	56.1
C3	C2	N1	H2C1	240.0	240.0
C3	C2	N1	H2C2	119.0	119.0
N1	C2	C3	H3C1	176.1	176.1
N1	C2	C3	H3C2	297.3	297.3
H2C1	C2	N1	H2C2	239.0	239.0
C2	N1	C8	C16	220.2	220.2
C8	N1	C2	C3	306.7	306.7
C8	N1	C2	H2C1	66.7	66.7
C8	N1	C2	H2C2	187.8	187.8
C8	N1	C16	N17	0.9	0.9
C8	N1	C16	C24	179.7	179.7
N1	C8	C7	C4	304.0	304.0
C7	C8	N1	H8C1	240.0	240.0
C7	C8	N1	H8C2	119.2	119.2
N1	C8	C7	H7C1	64.0	64.0
N1	C8	C7	H7C2	185.5	185.5
H8C1	C8	N1	H8C2	239.2	239.2
C2	N1	C16	C8	137.5	137.5
C16	N1	C2	C3	168.7	168.7
C16	N1	C2	H2C1	288.7	288.7
C16	N1	C2	H2C2	49.8	49.8
C16	N1	C8	C7	192.7	192.7
C16	N1	C8	H8C1	312.7	312.7
C16	N1	C8	H8C2	73.5	73.5
N17	C16	N1	C24	181.2	181.2
N1	C16	N17	C18	179.6	179.6
N1	C16	C24	C20	179.4	179.4
N1	C16	C24	C23	1.7	1.7
C3	C2	N1	C8	306.7	306.7
C3	C2	N1	C16	168.7	168.7
N1	C2	C3	H2C1	120.0	120.0
N1	C2	C3	H2C2	241.0	241.0
C2	C3	C4	C5	60.8	60.8
C2	C3	C4	C7	303.8	303.8
C2	C3	C4	C13	182.0	182.0
C4	C3	C2	H3C1	240.0	240.0
C4	C3	C2	H3C2	118.8	118.8
H2C1	C2	C3	H2C2	121.0	121.0
H3C1	C3	C2	H3C2	238.8	238.8
C4	C3	C2	H2C1	296.1	296.1
C4	C3	C2	H2C2	175.1	175.1
C2	C3	C4	H3C1	120.0	120.0
C2	C3	C4	H3C2	241.2	241.2
N6	C5	C4	C3	64.9	64.9
C5	C4	C3	C7	116.9	116.9
C5	C4	C3	C13	238.8	238.8
C3	C4	C5	H5C1	304.9	304.9
C3	C4	C5	H5C2	183.9	183.9
C8	C7	C4	C3	56.5	56.5
C7	C4	C3	C13	121.8	121.8
C3	C4	C7	H7C1	296.5	296.5
C3	C4	C7	H7C2	175.0	175.0
C9	C13	C4	C3	41.6	41.6
C3	C4	C13	H131	281.6	281.6
C3	C4	C13	H132	158.0	158.0
H3C1	C3	C4	H3C2	121.2	121.2
C3	C4	C5	N6	64.9	64.9
N6	C5	C4	C7	181.1	181.1
N6	C5	C4	C13	300.4	300.4
C4	C5	N6	H5C1	240.0	240.0
C4	C5	N6	H5C2	119.0	119.0
H5C1	C5	N6	H5C2	239.0	239.0
H6N1	N6	C5	H6N2	240.0	240.0
C3	C4	C5	C7	243.8	243.8
C3	C4	C5	C13	124.5	124.5
C5	C4	C3	H3C1	300.8	300.8
C5	C4	C3	H3C2	179.6	179.6
N6	C5	C4	H5C1	120.0	120.0
N6	C5	C4	H5C2	241.0	241.0
C4	C5	N6	H6N1	348.1	348.1
C4	C5	N6	H6N2	108.1	108.1
C8	C7	C4	C5	297.3	297.3
C7	C4	C5	C13	240.8	240.8
C5	C4	C7	H7C1	177.3	177.3
C5	C4	C7	H7C2	55.8	55.8
C9	C13	C4	C5	164.8	164.8
C5	C4	C13	H131	44.8	44.8
C5	C4	C13	H132	281.2	281.2
H5C1	C5	C4	H5C2	121.0	121.0
C7	C8	N1	C16	192.7	192.7
N1	C8	C7	H8C1	120.0	120.0
N1	C8	C7	H8C2	240.8	240.8
C3	C4	C7	C8	56.5	56.5
C5	C4	C7	C8	297.3	297.3
C8	C7	C4	C13	180.0	180.0
C4	C7	C8	H7C1	240.0	240.0
C4	C7	C8	H7C2	118.6	118.6
H8C1	C8	C7	H8C2	120.8	120.8
H7C1	C7	C8	H7C2	238.5	238.5
C3	C4	C7	C5	119.2	119.2
C3	C4	C7	C13	236.5	236.5
C7	C4	C3	H3C1	183.8	183.8
C7	C4	C3	H3C2	62.6	62.6
C5	C4	C7	C13	117.3	117.3
C7	C4	C5	H5C1	61.1	61.1
C7	C4	C5	H5C2	300.1	300.1
C4	C7	C8	H8C1	184.0	184.0
C4	C7	C8	H8C2	63.3	63.3
C8	C7	C4	H7C1	120.0	120.0
C8	C7	C4	H7C2	241.5	241.5
C9	C13	C4	C7	282.1	282.1
C7	C4	C13	H131	162.1	162.1
C7	C4	C13	H132	38.5	38.5
H7C1	C7	C4	H7C2	121.5	121.5
C15	C9	C10	C13	176.4	176.4
C10	C9	C15	C14	1.2	1.2
C10	C9	C15	H15	181.2	181.2
C10	C9	C13	C4	269.9	269.9
C10	C9	C13	H131	29.9	29.9
C10	C9	C13	H132	153.5	153.5
C9	C10	C11	C12	0.3	0.3
C11	C10	C9	H10	180.0	180.0
C9	C10	C11	H11	180.3	180.3
C10	C9	C15	C13	183.6	183.6
C15	C9	C10	C11	358.8	358.8
C15	C9	C10	H10	178.8	178.8
C15	C9	C13	C4	93.5	93.5
C15	C9	C13	H131	213.5	213.5
C15	C9	C13	H132	337.1	337.1
C12	C14	C15	C9	359.8	359.8
C14	C15	C9	H15	180.0	180.0
C9	C15	C14	H14	179.8	179.8
C3	C4	C13	C9	41.6	41.6
C5	C4	C13	C9	164.8	164.8
C7	C4	C13	C9	282.1	282.1
C10	C9	C13	C15	176.4	176.4
C13	C9	C10	C11	182.3	182.3
C13	C9	C10	H10	2.3	2.3
C13	C9	C15	C14	177.6	177.6
C13	C9	C15	H15	357.6	357.6
C4	C13	C9	H131	240.0	240.0
C4	C13	C9	H132	116.4	116.4
H131	C13	C9	H132	236.4	236.4
C11	C10	C9	C15	358.8	358.8
C11	C10	C9	C13	182.3	182.3
C9	C10	C11	H10	180.0	180.0
C10	C11	C12	CL1	177.9	177.9
C10	C11	C12	C14	0.7	0.7
C12	C11	C10	H11	180.0	180.0
C12	C11	C10	H10	180.3	180.3
C10	C11	C12	H11	180.0	180.0
CL1	C12	C11	C14	177.3	177.3
C11	C12	C14	C15	359.3	359.3
C11	C12	C14	H14	179.3	179.3
C11	C12	CL1	C14	182.8	182.8
CL1	C12	C11	H11	358.0	358.0
CL1	C12	C14	C15	182.0	182.0
CL1	C12	C14	H14	2.0	2.0
C9	C15	C14	C12	359.8	359.8
C11	C12	C14	CL1	177.2	177.2
C14	C12	C11	H11	180.7	180.7
C12	C14	C15	H15	179.8	179.8
C15	C14	C12	H14	180.0	180.0
C14	C15	C9	C13	177.6	177.6
C9	C15	C14	H15	180.0	180.0
C12	C14	C15	H14	180.0	180.0
N1	C16	N17	C24	178.9	178.9
N17	C16	C24	C20	358.2	358.2
N17	C16	C24	C23	180.5	180.5
C16	N17	C18	N19	0.6	0.6
C16	N17	C18	H18	180.6	180.6
N1	C16	C24	N17	181.2	181.2
C24	C16	N17	C18	0.7	0.7
N19	C20	C24	C16	1.9	1.9
N21	C20	C24	C16	181.8	181.8
C20	C24	C16	C23	177.7	177.7
C22	C23	C24	C16	178.1	178.1
C16	C24	C23	H23	358.1	358.1
C18	N17	C16	C24	0.7	0.7
N17	C18	N19	C20	359.4	359.4
N19	C18	N17	H18	180.0	180.0
N17	C18	N19	H18	180.0	180.0
C18	N19	C20	N21	179.4	179.4
C18	N19	C20	C24	359.3	359.3
C3	C4	C13	C5	236.8	236.8
C3	C4	C13	C7	119.5	119.5
C13	C4	C3	H3C1	62.0	62.0
C13	C4	C3	H3C2	300.8	300.8
C5	C4	C13	C7	242.7	242.7
C13	C4	C5	H5C1	180.3	180.3
C13	C4	C5	H5C2	59.3	59.3
C13	C4	C7	H7C1	60.0	60.0
C13	C4	C7	H7C2	298.6	298.6
C9	C13	C4	H131	120.0	120.0
C9	C13	C4	H132	243.6	243.6
H131	C13	C4	H132	123.6	123.6
C16	C24	C20	N19	1.9	1.9
C20	N19	C18	H18	179.4	179.4
N21	C20	N19	C24	180.1	180.1
N19	C20	N21	C22	179.5	179.5
N19	C20	N21	H21	359.5	359.5
N19	C20	C24	C23	180.2	180.2
C16	C24	C20	N21	181.8	181.8
N19	C20	N21	C24	179.9	179.9
N21	C20	C24	C23	0.1	0.1
C20	N21	C22	C23	0.6	0.6
C22	N21	C20	H21	180.0	180.0
C20	N21	C22	H22	180.6	180.6
C16	C24	C20	C23	181.6	181.6
N19	C20	C24	N21	180.1	180.1
C24	C20	N21	C22	359.6	359.6
C24	C20	N21	H21	179.6	179.6
C22	C23	C24	C20	0.2	0.2
C20	C24	C23	H23	180.2	180.2
C22	N21	C20	C24	359.6	359.6
C20	N21	C22	H21	180.0	180.0
N21	C22	C23	C24	359.5	359.5
C23	C22	N21	H22	180.0	180.0
N21	C22	C23	H23	179.5	179.5
C16	C24	C23	C22	178.1	178.1
C20	C24	C23	C22	0.2	0.2
C23	C22	N21	H21	180.6	180.6
N21	C22	C23	H22	180.0	180.0
C24	C23	C22	H23	180.0	180.0
C16	C24	C23	C20	177.9	177.9
C24	C23	C22	H22	179.5	179.5
C22	C23	C24	H23	180.0	180.0
H2C1	C2	N1	C8	66.7	66.7
H2C1	C2	N1	C16	288.7	288.7
N1	C2	H2C1	C3	238.0	238.0
N1	C2	H2C1	H2C2	119.0	119.0
H2C1	C2	C3	C4	296.1	296.1
C3	C2	H2C1	H2C2	241.0	241.0
H2C1	C2	C3	H3C1	56.1	56.1
H2C1	C2	C3	H3C2	177.3	177.3
H2C2	C2	N1	C8	187.8	187.8
H2C2	C2	N1	C16	49.8	49.8
N1	C2	H2C2	C3	121.4	121.4
N1	C2	H2C2	H2C1	240.7	240.7
H2C2	C2	C3	C4	175.1	175.1
C3	C2	H2C2	H2C1	119.3	119.3
H2C2	C2	C3	H3C1	295.1	295.1
H2C2	C2	C3	H3C2	56.3	56.3
H8C1	C8	N1	C16	312.7	312.7
N1	C8	H8C1	C7	238.5	238.5
N1	C8	H8C1	H8C2	119.3	119.3
H8C1	C8	C7	C4	184.0	184.0
C7	C8	H8C1	H8C2	240.7	240.8
H8C1	C8	C7	H7C1	304.0	304.0
H8C1	C8	C7	H7C2	65.5	65.5
H8C2	C8	N1	C16	73.5	73.5
N1	C8	H8C2	C7	121.0	121.0
N1	C8	H8C2	H8C1	240.5	240.5
H8C2	C8	C7	C4	63.3	63.3
C7	C8	H8C2	H8C1	119.5	119.5
H8C2	C8	C7	H7C1	183.2	183.2
H8C2	C8	C7	H7C2	304.7	304.7
C2	C3	H3C1	C4	237.7	237.7
H3C1	C3	C2	H2C1	56.1	56.1
H3C1	C3	C2	H2C2	295.1	295.1
C2	C3	H3C1	H3C2	118.8	118.8
H3C1	C3	C4	C5	300.8	300.8
H3C1	C3	C4	C7	183.8	183.8
H3C1	C3	C4	C13	62.0	62.0
C4	C3	H3C1	H3C2	241.1	241.1
C2	C3	H3C2	C4	121.5	121.5
H3C2	C3	C2	H2C1	177.3	177.3
H3C2	C3	C2	H2C2	56.3	56.3
C2	C3	H3C2	H3C1	240.8	240.8
H3C2	C3	C4	C5	179.6	179.6
H3C2	C3	C4	C7	62.6	62.6
H3C2	C3	C4	C13	300.8	300.8
C4	C3	H3C2	H3C1	119.3	119.3
N6	C5	H5C1	C4	238.1	238.1
N6	C5	H5C1	H5C2	119.0	119.0
H5C1	C5	N6	H6N1	108.2	108.2
H5C1	C5	N6	H6N2	228.1	228.1
H5C1	C5	C4	C7	61.1	61.1
H5C1	C5	C4	C13	180.3	180.3
C4	C5	H5C1	H5C2	241.0	241.0
N6	C5	H5C2	C4	121.3	121.3
N6	C5	H5C2	H5C1	240.6	240.6
H5C2	C5	N6	H6N1	229.2	229.2
H5C2	C5	N6	H6N2	349.1	349.1
H5C2	C5	C4	C7	300.1	300.1
H5C2	C5	C4	C13	59.3	59.3
C4	C5	H5C2	H5C1	119.4	119.4
H6N1	N6	C5	C4	348.1	348.1
H6N1	N6	C5	H5C1	108.2	108.2
H6N1	N6	C5	H5C2	229.2	229.2
C5	N6	H6N1	H6N2	120.0	120.0
H6N2	N6	C5	C4	108.1	108.1
H6N2	N6	C5	H5C1	228.1	228.1
H6N2	N6	C5	H5C2	349.1	349.1
C5	N6	H6N2	H6N1	240.0	240.0
C8	C7	H7C1	C4	237.3	237.3
H7C1	C7	C8	H8C1	304.0	304.0
H7C1	C7	C8	H8C2	183.2	183.2
C8	C7	H7C1	H7C2	118.6	118.6
H7C1	C7	C4	C13	60.0	60.0
C4	C7	H7C1	H7C2	241.4	241.4
C8	C7	H7C2	C4	121.9	121.9
H7C2	C7	C8	H8C1	65.5	65.5
H7C2	C7	C8	H8C2	304.7	304.7
C8	C7	H7C2	H7C1	241.0	241.0
H7C2	C7	C4	C13	298.6	298.6
C4	C7	H7C2	H7C1	119.1	119.1
H10	C10	C9	C15	178.8	178.8
H10	C10	C9	C13	2.3	2.3
C9	C10	H10	C11	180.0	180.0
H10	C10	C11	C12	180.3	180.3
H10	C10	C11	H11	0.3	0.3
H15	C15	C9	C13	357.6	357.6
C9	C15	H15	C14	180.0	180.0
H15	C15	C14	H14	359.8	359.8
C9	C13	H131	C4	233.7	233.7
C9	C13	H131	H132	116.8	116.8
C4	C13	H131	H132	243.2	243.2
C9	C13	H132	C4	124.3	124.3
C9	C13	H132	H131	242.2	242.2
C4	C13	H132	H131	117.8	117.8
C10	C11	H11	C12	180.0	180.0
H11	C11	C10	H10	0.3	0.3
H11	C11	C12	CL1	358.0	358.0
H11	C11	C12	C14	180.7	180.7
C12	C14	H14	C15	180.0	180.0
H14	C14	C15	H15	359.8	359.8
N17	C18	H18	N19	180.0	180.0
H18	C18	N19	C20	179.4	179.4
H21	N21	C20	C24	179.6	179.6
C20	N21	H21	C22	180.0	180.0
H21	N21	C22	C23	180.6	180.6
H21	N21	C22	H22	0.6	0.6
N21	C22	H22	C23	180.0	180.0
H22	C22	N21	H21	0.6	0.6
H22	C22	C23	C24	179.5	179.5
H22	C22	C23	H23	359.5	359.5
C22	C23	H23	C24	180.0	180.0
H23	C23	C22	H22	359.5	359.5