Atom Nomenclature for LZQ

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for LZQ

Atom Name (V3) Atom Name (V2)
C01 C01
C07 C07
C09 C09
C10 C10
C13 C13
C19 C19
N01 N01
O01 O01
C02 C02
C14 C14
C20 C20
O02 O02
O10 O10
O11 O11
C03 C03
C15 C15
C21 C21
C04 C04
C16 C16
C22 C22
C05 C05
C17 C17
C23 C23
C06 C06
C18 C18
C24 C24
C08 C08
C11 C11
C12 C12
H01 H01
H02 H02
H14 H14
H20 H20
HO11 HO11
H03 H03
H15 H15
H21 H21
H16 H16
H22 H22
H05 H05
H17 H17
H23 H23
H18 H18
H24 H24
H08 H08
H08A H08A
H11 H11
H11A H11A
H12 H12
H12A H12A