PDB Chemical Component LZD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LZD

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C3	1.525	1.525
C2	N26	1.491	1.491
C3	C4	1.525	1.525
C4	C5	1.529	1.529
C5	N6	1.466	1.466
C5	C25	1.539	1.539
N6	C7	1.352	1.352
C7	O8	1.228	1.228
C7	C9	1.477	1.477
C9	N10	1.362	1.362
C9	C13	1.389	1.389
N10	N11	1.359	1.359
N11	C12	1.353	1.353
C12	C13	1.392	1.392
C13	N14	1.388	1.388
N14	C15	1.346	1.346
C15	O16	1.234	1.234
C15	C17	1.495	1.495
C17	C18	1.399	1.399
C17	C23	1.378	1.378
C18	F19	1.349	1.349
C18	C20	1.396	1.396
C20	C21	1.386	1.386
C21	C22	1.389	1.389
C22	C23	1.395	1.395
C23	F24	1.346	1.346
C25	N26	1.491	1.491
C2	H2C1	1.100	1.100
C2	H2C2	1.100	1.100
C3	H3C1	1.100	1.100
C3	H3C2	1.100	1.100
N26	H26	1.000	1.000
C4	H4C1	1.100	1.100
C4	H4C2	1.100	1.100
C5	H5	1.100	1.100
N6	H6	1.000	1.000
C25	H251	1.099	1.100
C25	H252	1.100	1.100
C12	H12	1.080	1.080
C20	H20	1.080	1.079
C21	H21	1.080	1.080
C22	H22	1.080	1.080
N11	H11	1.000	1.000
N14	H14	1.000	1.000

Bond Angles for LZD

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	N26	110.5	110.5
C2	C3	C4	111.1	111.1
C3	C2	H2C1	109.1	109.1
C3	C2	H2C2	108.9	108.9
C2	C3	H3C1	108.9	108.9
C2	C3	H3C2	108.6	108.6
C2	N26	C25	111.3	111.3
N26	C2	H2C1	109.1	109.1
N26	C2	H2C2	108.9	108.9
C2	N26	H26	108.9	108.9
C3	C4	C5	110.4	110.4
C4	C3	H3C1	108.9	108.9
C4	C3	H3C2	108.6	108.6
C3	C4	H4C1	109.2	109.2
C3	C4	H4C2	109.0	109.0
C4	C5	N6	111.6	111.6
C4	C5	C25	110.4	110.4
C5	C4	H4C1	109.2	109.2
C5	C4	H4C2	109.0	109.0
C4	C5	H5	107.9	107.9
N6	C5	C25	111.1	111.1
C5	N6	C7	120.7	120.7
N6	C5	H5	107.1	107.2
C5	N6	H6	119.6	119.6
C5	C25	N26	110.8	110.8
C25	C5	H5	108.4	108.4
C5	C25	H251	109.0	109.0
C5	C25	H252	108.7	108.7
N6	C7	O8	122.5	122.5
N6	C7	C9	116.9	116.9
C7	N6	H6	119.7	119.7
O8	C7	C9	120.6	120.6
C7	C9	N10	123.3	123.3
C7	C9	C13	126.3	126.3
N10	C9	C13	110.4	110.4
C9	N10	N11	105.3	105.3
C9	C13	C12	105.8	105.8
C9	C13	N14	123.5	123.5
N10	N11	C12	111.7	111.7
N10	N11	H11	124.2	124.2
N11	C12	C13	106.8	106.8
N11	C12	H12	126.6	126.6
C12	N11	H11	124.1	124.1
C12	C13	N14	130.7	130.7
C13	C12	H12	126.6	126.6
C13	N14	C15	126.0	126.0
C13	N14	H14	117.0	117.0
N14	C15	O16	123.1	123.1
N14	C15	C17	115.7	115.7
C15	N14	H14	117.0	117.0
O16	C15	C17	121.2	121.2
C15	C17	C18	121.3	121.3
C15	C17	C23	120.9	120.9
C18	C17	C23	117.8	117.8
C17	C18	F19	118.6	118.6
C17	C18	C20	121.4	121.4
C17	C23	C22	121.7	121.7
C17	C23	F24	118.3	118.3
F19	C18	C20	120.0	120.0
C18	C20	C21	119.5	119.5
C18	C20	H20	120.2	120.2
C20	C21	C22	119.8	119.8
C21	C20	H20	120.2	120.3
C20	C21	H21	120.1	120.1
C21	C22	C23	119.7	119.7
C22	C21	H21	120.1	120.1
C21	C22	H22	120.1	120.1
C22	C23	F24	120.0	120.0
C23	C22	H22	120.2	120.2
C25	N26	H26	108.9	108.9
N26	C25	H251	109.0	109.0
N26	C25	H252	108.7	108.8
H2C1	C2	H2C2	110.3	110.3
H3C1	C3	H3C2	110.7	110.7
H4C1	C4	H4C2	110.2	110.2
H251	C25	H252	110.5	110.5

Torsion Angles for LZD

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	N26	C25	301.5	301.5
N26	C2	C3	H2C1	240.0	240.0
N26	C2	C3	H2C2	119.6	119.6
C3	C2	N26	H26	61.5	61.5
C2	C3	C4	C5	304.6	304.6
C4	C3	C2	H3C1	240.0	240.0
C4	C3	C2	H3C2	119.3	119.3
C2	C3	C4	H4C1	64.6	64.6
C2	C3	C4	H4C2	185.0	185.0
H2C1	C2	C3	H2C2	239.6	239.6
H3C1	C3	C2	H3C2	239.3	239.3
N26	C2	C3	C4	57.0	57.0
C3	C2	N26	H2C1	120.0	120.0
C3	C2	N26	H2C2	240.4	240.4
N26	C2	C3	H3C1	177.0	177.0
N26	C2	C3	H3C2	297.6	297.6
C5	C25	N26	C2	58.4	58.4
C25	N26	C2	H26	240.0	240.0
C2	N26	C25	H251	298.4	298.4
C2	N26	C25	H252	177.8	177.8
H2C1	C2	N26	H2C2	120.4	120.4
C4	C3	C2	N26	57.0	57.0
C4	C3	C2	H2C1	177.0	177.0
C4	C3	C2	H2C2	297.4	297.4
C2	C3	C4	H3C1	120.0	120.0
C2	C3	C4	H3C2	240.7	240.7
C3	C4	C5	N6	178.9	178.9
C3	C4	C5	C25	54.7	54.7
C5	C4	C3	H4C1	240.0	240.0
C5	C4	C3	H4C2	119.6	119.6
C3	C4	C5	H5	296.4	296.4
H3C1	C3	C4	H3C2	120.7	120.7
H4C1	C4	C3	H4C2	239.6	239.6
C5	C4	C3	H3C1	184.6	184.6
C5	C4	C3	H3C2	64.0	64.0
C3	C4	C5	H4C1	120.0	120.0
C3	C4	C5	H4C2	240.4	240.4
N6	C5	C4	C25	124.2	124.2
C4	C5	N6	C7	153.2	153.2
N6	C5	C4	H5	242.5	242.5
C4	C5	N6	H6	333.3	333.3
C4	C5	C25	N26	303.7	303.7
C25	C5	C4	H5	118.4	118.3
C4	C5	C25	H251	63.7	63.6
C4	C5	C25	H252	184.2	184.2
H4C1	C4	C5	H4C2	120.4	120.4
C4	C5	N6	C25	236.2	236.2
N6	C5	C4	H4C1	58.9	58.9
N6	C5	C4	H4C2	298.5	298.5
C4	C5	N6	H5	117.9	117.9
N6	C5	C25	N26	179.2	179.2
C25	C5	N6	H5	241.7	241.7
N6	C5	C25	H251	299.2	299.2
N6	C5	C25	H252	59.8	59.8
C5	N6	C7	O8	1.1	1.1
C5	N6	C7	C9	179.7	179.7
C7	N6	C5	H6	180.0	180.0
C2	N26	C25	C5	58.4	58.4
C4	C5	C25	N6	124.4	124.4
C25	C5	C4	H4C1	294.7	294.7
C25	C5	C4	H4C2	174.3	174.3
C4	C5	C25	H5	242.0	242.0
C25	C5	N6	C7	277.0	277.0
N6	C5	C25	H5	117.5	117.5
C25	C5	N6	H6	97.0	97.0
C5	C25	N26	H26	298.4	298.4
N26	C25	C5	H251	240.0	240.0
N26	C25	C5	H252	119.4	119.5
H251	C25	C5	H252	239.4	239.4
C7	N6	C5	C25	277.0	277.0
C7	N6	C5	H5	35.3	35.3
C5	N6	C7	H6	180.0	180.0
O8	C7	N6	C9	181.4	181.4
N6	C7	C9	N10	14.5	14.5
N6	C7	C9	C13	194.8	194.8
N6	C7	O8	C9	178.5	178.5
O8	C7	N6	H6	181.1	181.1
O8	C7	C9	N10	193.1	193.1
O8	C7	C9	C13	13.4	13.4
N6	C7	C9	O8	181.4	181.4
C9	C7	N6	H6	359.7	359.7
N10	C9	C7	C13	179.7	179.7
C7	C9	N10	N11	180.5	180.5
C7	C9	C13	C12	180.0	180.0
C7	C9	C13	N14	0.8	0.8
C7	C9	N10	C13	180.2	180.2
N10	C9	C13	C12	0.3	0.3
N10	C9	C13	N14	181.0	181.0
C9	N10	N11	C12	359.2	359.2
C9	N10	N11	H11	179.2	179.2
C7	C9	C13	N10	179.7	179.7
C13	C9	N10	N11	0.3	0.3
N11	C12	C13	C9	359.3	359.3
C12	C13	C9	N14	179.2	179.2
C9	C13	C12	H12	179.3	179.3
C9	C13	N14	C15	169.2	169.2
C9	C13	N14	H14	349.2	349.2
N11	N10	C9	C13	0.3	0.3
N10	N11	C12	C13	1.0	1.0
N10	N11	C12	H12	180.9	180.9
C12	N11	N10	H11	180.0	180.0
C9	C13	C12	N11	359.3	359.3
N10	N11	C12	H11	180.0	180.0
N11	C12	C13	N14	178.4	178.4
C13	C12	N11	H12	180.0	180.0
C9	C13	C12	N14	180.8	180.8
N11	C12	C13	H12	180.0	180.0
C13	C12	N11	H11	181.0	181.0
C12	C13	N14	C15	350.2	350.2
C12	C13	N14	H14	170.2	170.2
C9	C13	N14	C12	179.0	179.0
N14	C13	C12	H12	358.5	358.5
C13	N14	C15	O16	7.0	7.0
C13	N14	C15	C17	187.0	187.0
C15	N14	C13	H14	180.0	180.0
C13	N14	C15	H14	180.0	180.0
O16	C15	N14	C17	179.9	179.9
N14	C15	C17	C18	61.2	61.2
N14	C15	C17	C23	240.3	240.3
N14	C15	O16	C17	180.1	180.1
O16	C15	N14	H14	187.0	187.0
O16	C15	C17	C18	241.2	241.2
O16	C15	C17	C23	60.4	60.4
N14	C15	C17	O16	179.9	179.9
C17	C15	N14	H14	7.1	7.1
C18	C17	C15	C23	180.9	180.9
C15	C17	C18	F19	359.4	359.4
C15	C17	C18	C20	179.9	179.9
C15	C17	C23	C22	180.2	180.2
C15	C17	C23	F24	0.9	0.9
C15	C17	C18	C23	179.2	179.2
C18	C17	C23	C22	359.4	359.4
C18	C17	C23	F24	180.1	180.1
F19	C18	C17	C20	179.5	179.5
C17	C18	C20	C21	359.4	359.4
C17	C18	C20	H20	179.3	179.4
C15	C17	C23	C18	180.8	180.8
C23	C17	C18	F19	180.3	180.3
C23	C17	C18	C20	0.7	0.7
C21	C22	C23	C17	0.4	0.4
C22	C23	C17	F24	179.3	179.3
C17	C23	C22	H22	180.4	180.4
F19	C18	C17	C23	180.3	180.3
C17	C18	F19	C20	180.5	180.5
F19	C18	C20	C21	179.9	179.9
F19	C18	C20	H20	359.8	359.9
C20	C18	C17	C23	0.7	0.7
C17	C18	C20	F19	179.5	179.5
C18	C20	C21	C22	0.3	0.3
C21	C20	C18	H20	180.0	180.0
C18	C20	C21	H21	180.4	180.4
C18	C20	C21	H20	180.0	180.0
C20	C21	C22	C23	359.8	359.8
C22	C21	C20	H21	180.0	180.0
C20	C21	C22	H22	179.8	179.8
C17	C23	C22	C21	0.4	0.4
C22	C21	C20	H20	180.4	180.3
C20	C21	C22	H21	180.0	180.0
C21	C22	C23	F24	179.7	179.7
C23	C22	C21	H22	180.0	180.0
C17	C23	C22	F24	180.7	180.7
C23	C22	C21	H21	179.8	179.8
C21	C22	C23	H22	180.0	180.0
C17	C23	F24	C22	179.3	179.3
F24	C23	C22	H22	359.7	359.7
C25	N26	C2	H2C1	181.5	181.5
C25	N26	C2	H2C2	61.1	61.1
C2	N26	C25	H26	120.0	120.0
N26	C25	C5	H5	61.7	61.7
C5	C25	N26	H251	120.0	120.0
C5	C25	N26	H252	240.6	240.5
H251	C25	N26	H252	120.6	120.6
C3	C2	H2C1	N26	239.2	239.2
H2C1	C2	C3	C4	177.0	177.0
C3	C2	H2C1	H2C2	119.6	119.6
H2C1	C2	C3	H3C1	297.0	297.0
H2C1	C2	C3	H3C2	57.6	57.6
H2C1	C2	N26	C25	181.5	181.5
N26	C2	H2C1	H2C2	240.4	240.4
H2C1	C2	N26	H26	301.5	301.5
C3	C2	H2C2	N26	120.6	120.6
H2C2	C2	C3	C4	297.4	297.4
C3	C2	H2C2	H2C1	240.3	240.3
H2C2	C2	C3	H3C1	57.4	57.4
H2C2	C2	C3	H3C2	178.1	178.1
H2C2	C2	N26	C25	61.1	61.1
N26	C2	H2C2	H2C1	119.7	119.7
H2C2	C2	N26	H26	181.1	181.1
H3C1	C3	C2	N26	177.0	177.0
C2	C3	H3C1	C4	238.7	238.7
H3C1	C3	C2	H2C1	297.0	297.0
H3C1	C3	C2	H2C2	57.4	57.4
C2	C3	H3C1	H3C2	119.3	119.3
H3C1	C3	C4	C5	184.6	184.6
C4	C3	H3C1	H3C2	240.7	240.7
H3C1	C3	C4	H4C1	304.6	304.6
H3C1	C3	C4	H4C2	65.0	65.0
H3C2	C3	C2	N26	297.6	297.6
C2	C3	H3C2	C4	120.9	120.9
H3C2	C3	C2	H2C1	57.6	57.6
H3C2	C3	C2	H2C2	178.1	178.1
C2	C3	H3C2	H3C1	240.5	240.5
H3C2	C3	C4	C5	64.0	64.0
C4	C3	H3C2	H3C1	119.6	119.6
H3C2	C3	C4	H4C1	183.9	183.9
H3C2	C3	C4	H4C2	304.3	304.3
C2	N26	H26	C25	238.5	238.5
H26	N26	C2	H2C1	301.5	301.5
H26	N26	C2	H2C2	181.1	181.1
H26	N26	C25	H251	178.4	178.4
H26	N26	C25	H252	57.8	57.8
C3	C4	H4C1	C5	239.3	239.3
H4C1	C4	C3	H3C1	304.6	304.6
H4C1	C4	C3	H3C2	183.9	183.9
C3	C4	H4C1	H4C2	119.6	119.6
H4C1	C4	C5	N6	58.9	58.9
H4C1	C4	C5	C25	294.7	294.7
C5	C4	H4C1	H4C2	240.4	240.4
H4C1	C4	C5	H5	176.4	176.4
C3	C4	H4C2	C5	120.5	120.5
H4C2	C4	C3	H3C1	65.0	65.0
H4C2	C4	C3	H3C2	304.3	304.3
C3	C4	H4C2	H4C1	240.2	240.2
H4C2	C4	C5	N6	298.5	298.5
H4C2	C4	C5	C25	174.3	174.3
C5	C4	H4C2	H4C1	119.7	119.7
H4C2	C4	C5	H5	56.0	56.0
C4	C5	H5	N6	239.7	239.7
C4	C5	H5	C25	119.6	119.6
H5	C5	C4	H4C1	176.4	176.4
H5	C5	C4	H4C2	56.0	56.0
N6	C5	H5	C25	240.0	240.0
H5	C5	N6	C7	35.3	35.3
H5	C5	N6	H6	215.3	215.3
H5	C5	C25	N26	61.7	61.7
H5	C5	C25	H251	181.7	181.7
H5	C5	C25	H252	302.3	302.2
H6	N6	C5	C25	97.0	97.0
C5	N6	H6	C7	180.0	180.0
H6	N6	C5	H5	215.3	215.3
H6	N6	C7	O8	181.1	181.1
H6	N6	C7	C9	359.7	359.7
C5	C25	H251	N26	238.9	238.9
H251	C25	C5	H5	181.7	181.7
C5	C25	H251	H252	119.5	119.5
H251	C25	N26	H26	178.4	178.4
N26	C25	H251	H252	240.5	240.5
C5	C25	H252	N26	120.7	120.7
H252	C25	C5	H5	302.3	302.2
C5	C25	H252	H251	240.3	240.3
H252	C25	N26	H26	57.8	57.8
N26	C25	H252	H251	119.6	119.6
N11	C12	H12	C13	180.0	180.0
H12	C12	N11	H11	0.9	0.9
H12	C12	C13	N14	358.5	358.5
C18	C20	H20	C21	180.0	180.0
H20	C20	C21	C22	180.4	180.3
H20	C20	C21	H21	0.4	0.4
C20	C21	H21	C22	180.0	180.0
H21	C21	C20	H20	0.4	0.4
H21	C21	C22	C23	179.8	179.8
H21	C21	C22	H22	359.8	359.8
C21	C22	H22	C23	180.0	180.0
H22	C22	C21	H21	359.8	359.8
H22	C22	C23	F24	359.7	359.7
N10	N11	H11	C12	180.0	180.0
H11	N11	C12	C13	181.0	181.0
H11	N11	C12	H12	0.9	0.9
C13	N14	H14	C15	180.0	180.0
H14	N14	C15	O16	187.0	187.0
H14	N14	C15	C17	7.1	7.1