PDB Chemical Component LZ9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LZ9
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
F1 |
C2 |
1.345 |
1.345 |
C2 |
C3 |
1.383 |
1.383 |
C2 |
C26 |
1.385 |
1.385 |
C3 |
C4 |
1.378 |
1.378 |
C4 |
C5 |
1.403 |
1.403 |
C5 |
N6 |
1.423 |
1.423 |
C5 |
C25 |
1.404 |
1.404 |
N6 |
C7 |
1.352 |
1.352 |
C7 |
O8 |
1.223 |
1.223 |
C7 |
C9 |
1.473 |
1.473 |
C9 |
N10 |
1.308 |
1.308 |
C9 |
C13 |
1.398 |
1.398 |
N10 |
N11 |
1.357 |
1.357 |
N11 |
C12 |
1.316 |
1.316 |
C12 |
C13 |
1.359 |
1.359 |
C13 |
N14 |
1.383 |
1.383 |
N14 |
C15 |
1.342 |
1.342 |
C15 |
O16 |
1.241 |
1.241 |
C15 |
C17 |
1.510 |
1.510 |
C17 |
C18 |
1.403 |
1.403 |
C17 |
C23 |
1.410 |
1.410 |
C18 |
F19 |
1.348 |
1.348 |
C18 |
C20 |
1.400 |
1.400 |
C20 |
C21 |
1.394 |
1.394 |
C21 |
C22 |
1.394 |
1.394 |
C22 |
C23 |
1.394 |
1.394 |
C23 |
F24 |
1.342 |
1.342 |
C25 |
C26 |
1.383 |
1.383 |
C3 |
H3 |
1.080 |
1.080 |
C26 |
H26 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
N6 |
H6 |
1.000 |
1.000 |
C25 |
H25 |
1.080 |
1.080 |
C12 |
H12 |
1.080 |
1.080 |
C20 |
H20 |
1.080 |
1.080 |
C21 |
H21 |
1.080 |
1.080 |
C22 |
H22 |
1.080 |
1.080 |
N11 |
H11 |
1.000 |
1.000 |
N14 |
H14 |
1.000 |
1.000 |
Bond Angles for LZ9
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
F1 |
C2 |
C3 |
118.8 |
118.8 |
F1 |
C2 |
C26 |
119.2 |
119.2 |
C3 |
C2 |
C26 |
122.0 |
122.0 |
C2 |
C3 |
C4 |
119.1 |
119.1 |
C2 |
C3 |
H3 |
120.4 |
120.4 |
C2 |
C26 |
C25 |
119.0 |
119.0 |
C2 |
C26 |
H26 |
120.5 |
120.5 |
C3 |
C4 |
C5 |
120.3 |
120.3 |
C4 |
C3 |
H3 |
120.5 |
120.5 |
C3 |
C4 |
H4 |
119.8 |
119.8 |
C4 |
C5 |
N6 |
120.2 |
120.2 |
C4 |
C5 |
C25 |
119.5 |
119.5 |
C5 |
C4 |
H4 |
119.9 |
119.9 |
N6 |
C5 |
C25 |
120.3 |
120.3 |
C5 |
N6 |
C7 |
124.0 |
124.0 |
C5 |
N6 |
H6 |
118.0 |
118.0 |
C5 |
C25 |
C26 |
120.0 |
120.0 |
C5 |
C25 |
H25 |
120.0 |
120.0 |
N6 |
C7 |
O8 |
122.4 |
122.4 |
N6 |
C7 |
C9 |
117.1 |
117.1 |
C7 |
N6 |
H6 |
118.0 |
118.0 |
O8 |
C7 |
C9 |
120.3 |
120.3 |
C7 |
C9 |
N10 |
123.7 |
123.7 |
C7 |
C9 |
C13 |
126.1 |
126.1 |
N10 |
C9 |
C13 |
110.2 |
110.2 |
C9 |
N10 |
N11 |
105.1 |
105.1 |
C9 |
C13 |
C12 |
105.8 |
105.8 |
C9 |
C13 |
N14 |
123.8 |
123.8 |
N10 |
N11 |
C12 |
112.3 |
112.3 |
N10 |
N11 |
H11 |
123.8 |
123.8 |
N11 |
C12 |
C13 |
106.5 |
106.5 |
N11 |
C12 |
H12 |
126.7 |
126.7 |
C12 |
N11 |
H11 |
123.8 |
123.8 |
C12 |
C13 |
N14 |
130.4 |
130.4 |
C13 |
C12 |
H12 |
126.7 |
126.7 |
C13 |
N14 |
C15 |
125.6 |
125.6 |
C13 |
N14 |
H14 |
117.2 |
117.2 |
N14 |
C15 |
O16 |
121.9 |
121.9 |
N14 |
C15 |
C17 |
115.9 |
115.9 |
C15 |
N14 |
H14 |
117.2 |
117.2 |
O16 |
C15 |
C17 |
122.2 |
122.2 |
C15 |
C17 |
C18 |
121.3 |
121.3 |
C15 |
C17 |
C23 |
121.7 |
121.7 |
C18 |
C17 |
C23 |
116.9 |
116.9 |
C17 |
C18 |
F19 |
118.3 |
118.3 |
C17 |
C18 |
C20 |
121.8 |
121.8 |
C17 |
C23 |
C22 |
122.0 |
122.0 |
C17 |
C23 |
F24 |
118.7 |
118.7 |
F19 |
C18 |
C20 |
119.9 |
119.9 |
C18 |
C20 |
C21 |
119.7 |
119.7 |
C18 |
C20 |
H20 |
120.1 |
120.1 |
C20 |
C21 |
C22 |
119.9 |
119.9 |
C21 |
C20 |
H20 |
120.1 |
120.1 |
C20 |
C21 |
H21 |
120.0 |
120.0 |
C21 |
C22 |
C23 |
119.7 |
119.7 |
C22 |
C21 |
H21 |
120.0 |
120.0 |
C21 |
C22 |
H22 |
120.2 |
120.2 |
C22 |
C23 |
F24 |
119.3 |
119.3 |
C23 |
C22 |
H22 |
120.2 |
120.2 |
C25 |
C26 |
H26 |
120.5 |
120.5 |
C26 |
C25 |
H25 |
120.0 |
120.0 |
Torsion Angles for LZ9
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
F1 |
C26 |
180.1 |
180.1 |
F1 |
C2 |
C3 |
C4 |
180.5 |
180.5 |
F1 |
C2 |
C3 |
H3 |
0.5 |
0.5 |
F1 |
C2 |
C26 |
C25 |
180.0 |
180.0 |
F1 |
C2 |
C26 |
H26 |
0.0 |
0.0 |
F1 |
C2 |
C3 |
C26 |
179.9 |
179.9 |
C3 |
C2 |
C26 |
C25 |
359.9 |
359.9 |
C3 |
C2 |
C26 |
H26 |
179.9 |
179.9 |
C2 |
C3 |
C4 |
C5 |
359.6 |
359.6 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
179.6 |
179.6 |
F1 |
C2 |
C26 |
C3 |
180.1 |
180.1 |
C26 |
C2 |
C3 |
C4 |
0.6 |
0.6 |
C26 |
C2 |
C3 |
H3 |
180.6 |
180.6 |
C5 |
C25 |
C26 |
C2 |
359.3 |
359.3 |
C25 |
C26 |
C2 |
H26 |
180.0 |
180.0 |
C2 |
C26 |
C25 |
H25 |
179.3 |
179.3 |
C4 |
C3 |
C2 |
C26 |
0.6 |
0.6 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
N6 |
181.1 |
181.1 |
C3 |
C4 |
C5 |
C25 |
359.6 |
359.6 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H3 |
179.6 |
179.6 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
N6 |
C5 |
C4 |
C25 |
181.5 |
181.5 |
C4 |
C5 |
N6 |
C7 |
117.8 |
117.8 |
C4 |
C5 |
N6 |
H6 |
297.8 |
297.8 |
C4 |
C5 |
C25 |
C26 |
0.9 |
0.9 |
C4 |
C5 |
C25 |
H25 |
180.9 |
180.9 |
C4 |
C5 |
N6 |
C25 |
178.5 |
178.5 |
N6 |
C5 |
C4 |
H4 |
1.1 |
1.1 |
N6 |
C5 |
C25 |
C26 |
179.4 |
179.4 |
N6 |
C5 |
C25 |
H25 |
359.5 |
359.5 |
C5 |
N6 |
C7 |
O8 |
358.4 |
358.4 |
C5 |
N6 |
C7 |
C9 |
174.7 |
174.7 |
C7 |
N6 |
C5 |
H6 |
180.0 |
180.0 |
C2 |
C26 |
C25 |
C5 |
359.3 |
359.3 |
C4 |
C5 |
C25 |
N6 |
181.5 |
181.5 |
C25 |
C5 |
C4 |
H4 |
179.6 |
179.6 |
C25 |
C5 |
N6 |
C7 |
299.2 |
299.2 |
C25 |
C5 |
N6 |
H6 |
119.3 |
119.3 |
C5 |
C25 |
C26 |
H26 |
179.3 |
179.3 |
C26 |
C25 |
C5 |
H25 |
180.0 |
180.0 |
C7 |
N6 |
C5 |
C25 |
299.2 |
299.2 |
C5 |
N6 |
C7 |
H6 |
180.0 |
180.0 |
O8 |
C7 |
N6 |
C9 |
183.7 |
183.7 |
N6 |
C7 |
C9 |
N10 |
21.3 |
21.3 |
N6 |
C7 |
C9 |
C13 |
202.7 |
202.7 |
N6 |
C7 |
O8 |
C9 |
176.2 |
176.2 |
O8 |
C7 |
N6 |
H6 |
178.4 |
178.4 |
O8 |
C7 |
C9 |
N10 |
197.7 |
197.7 |
O8 |
C7 |
C9 |
C13 |
19.1 |
19.1 |
N6 |
C7 |
C9 |
O8 |
183.6 |
183.6 |
C9 |
C7 |
N6 |
H6 |
354.7 |
354.7 |
N10 |
C9 |
C7 |
C13 |
178.6 |
178.6 |
C7 |
C9 |
N10 |
N11 |
181.1 |
181.1 |
C7 |
C9 |
C13 |
C12 |
179.2 |
179.2 |
C7 |
C9 |
C13 |
N14 |
0.2 |
0.2 |
C7 |
C9 |
N10 |
C13 |
181.2 |
181.2 |
N10 |
C9 |
C13 |
C12 |
0.5 |
0.5 |
N10 |
C9 |
C13 |
N14 |
181.5 |
181.5 |
C9 |
N10 |
N11 |
C12 |
359.8 |
359.8 |
C9 |
N10 |
N11 |
H11 |
179.8 |
179.8 |
C7 |
C9 |
C13 |
N10 |
178.8 |
178.8 |
C13 |
C9 |
N10 |
N11 |
359.8 |
359.8 |
N11 |
C12 |
C13 |
C9 |
359.4 |
359.4 |
C12 |
C13 |
C9 |
N14 |
179.0 |
179.0 |
C9 |
C13 |
C12 |
H12 |
179.4 |
179.4 |
C9 |
C13 |
N14 |
C15 |
174.8 |
174.8 |
C9 |
C13 |
N14 |
H14 |
354.8 |
354.8 |
N11 |
N10 |
C9 |
C13 |
359.8 |
359.8 |
N10 |
N11 |
C12 |
C13 |
0.5 |
0.5 |
N10 |
N11 |
C12 |
H12 |
180.5 |
180.5 |
C12 |
N11 |
N10 |
H11 |
180.0 |
180.0 |
C9 |
C13 |
C12 |
N11 |
359.4 |
359.4 |
N10 |
N11 |
C12 |
H11 |
180.0 |
180.0 |
N11 |
C12 |
C13 |
N14 |
178.3 |
178.3 |
C13 |
C12 |
N11 |
H12 |
180.0 |
180.0 |
C9 |
C13 |
C12 |
N14 |
181.1 |
181.1 |
N11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C13 |
C12 |
N11 |
H11 |
180.5 |
180.5 |
C12 |
C13 |
N14 |
C15 |
356.1 |
356.1 |
C12 |
C13 |
N14 |
H14 |
176.1 |
176.1 |
C9 |
C13 |
N14 |
C12 |
178.7 |
178.7 |
N14 |
C13 |
C12 |
H12 |
358.3 |
358.3 |
C13 |
N14 |
C15 |
O16 |
2.6 |
2.6 |
C13 |
N14 |
C15 |
C17 |
179.9 |
179.9 |
C15 |
N14 |
C13 |
H14 |
180.0 |
180.0 |
C13 |
N14 |
C15 |
H14 |
180.0 |
180.0 |
O16 |
C15 |
N14 |
C17 |
182.7 |
182.7 |
N14 |
C15 |
C17 |
C18 |
248.3 |
248.3 |
N14 |
C15 |
C17 |
C23 |
65.3 |
65.3 |
N14 |
C15 |
O16 |
C17 |
177.1 |
177.1 |
O16 |
C15 |
N14 |
H14 |
182.6 |
182.6 |
O16 |
C15 |
C17 |
C18 |
65.6 |
65.6 |
O16 |
C15 |
C17 |
C23 |
242.6 |
242.6 |
N14 |
C15 |
C17 |
O16 |
182.7 |
182.7 |
C17 |
C15 |
N14 |
H14 |
359.9 |
359.9 |
C18 |
C17 |
C15 |
C23 |
183.0 |
183.0 |
C15 |
C17 |
C18 |
F19 |
357.9 |
357.9 |
C15 |
C17 |
C18 |
C20 |
177.9 |
177.9 |
C15 |
C17 |
C23 |
C22 |
181.7 |
181.7 |
C15 |
C17 |
C23 |
F24 |
1.7 |
1.7 |
C15 |
C17 |
C18 |
C23 |
177.1 |
177.1 |
C18 |
C17 |
C23 |
C22 |
358.8 |
358.8 |
C18 |
C17 |
C23 |
F24 |
178.8 |
178.8 |
F19 |
C18 |
C17 |
C20 |
180.0 |
180.0 |
C17 |
C18 |
C20 |
C21 |
359.6 |
359.6 |
C17 |
C18 |
C20 |
H20 |
179.6 |
179.6 |
C15 |
C17 |
C23 |
C18 |
182.9 |
182.9 |
C23 |
C17 |
C18 |
F19 |
180.8 |
180.8 |
C23 |
C17 |
C18 |
C20 |
0.8 |
0.8 |
C21 |
C22 |
C23 |
C17 |
1.2 |
1.2 |
C22 |
C23 |
C17 |
F24 |
180.0 |
180.0 |
C17 |
C23 |
C22 |
H22 |
181.1 |
181.1 |
F19 |
C18 |
C17 |
C23 |
180.8 |
180.8 |
C17 |
C18 |
F19 |
C20 |
180.0 |
180.0 |
F19 |
C18 |
C20 |
C21 |
179.6 |
179.6 |
F19 |
C18 |
C20 |
H20 |
359.6 |
359.6 |
C20 |
C18 |
C17 |
C23 |
0.8 |
0.8 |
C17 |
C18 |
C20 |
F19 |
180.0 |
180.0 |
C18 |
C20 |
C21 |
C22 |
0.3 |
0.3 |
C21 |
C20 |
C18 |
H20 |
180.0 |
180.0 |
C18 |
C20 |
C21 |
H21 |
180.4 |
180.4 |
C18 |
C20 |
C21 |
H20 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
C23 |
359.3 |
359.3 |
C22 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
H22 |
179.3 |
179.3 |
C17 |
C23 |
C22 |
C21 |
1.2 |
1.2 |
C22 |
C21 |
C20 |
H20 |
180.4 |
180.4 |
C20 |
C21 |
C22 |
H21 |
180.0 |
180.0 |
C21 |
C22 |
C23 |
F24 |
181.2 |
181.2 |
C23 |
C22 |
C21 |
H22 |
180.0 |
180.0 |
C17 |
C23 |
C22 |
F24 |
180.0 |
180.0 |
C23 |
C22 |
C21 |
H21 |
179.3 |
179.3 |
C21 |
C22 |
C23 |
H22 |
180.0 |
180.0 |
C17 |
C23 |
F24 |
C22 |
180.0 |
180.0 |
F24 |
C23 |
C22 |
H22 |
1.2 |
1.2 |
C2 |
C26 |
C25 |
H26 |
180.0 |
180.0 |
C5 |
C25 |
C26 |
H25 |
180.0 |
180.0 |
H3 |
C3 |
C2 |
C26 |
180.6 |
180.6 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
179.6 |
179.6 |
H3 |
C3 |
C4 |
H4 |
359.6 |
359.6 |
C2 |
C26 |
H26 |
C25 |
180.0 |
180.0 |
H26 |
C26 |
C25 |
H25 |
359.3 |
359.3 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.6 |
359.6 |
H4 |
C4 |
C5 |
N6 |
1.1 |
1.1 |
H4 |
C4 |
C5 |
C25 |
179.6 |
179.6 |
H6 |
N6 |
C5 |
C25 |
119.3 |
119.3 |
C5 |
N6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
N6 |
C7 |
O8 |
178.4 |
178.4 |
H6 |
N6 |
C7 |
C9 |
354.7 |
354.7 |
C5 |
C25 |
H25 |
C26 |
180.0 |
180.0 |
H25 |
C25 |
C26 |
H26 |
359.3 |
359.3 |
N11 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
H12 |
C12 |
N11 |
H11 |
0.5 |
0.5 |
H12 |
C12 |
C13 |
N14 |
358.3 |
358.3 |
C18 |
C20 |
H20 |
C21 |
180.0 |
180.0 |
H20 |
C20 |
C21 |
C22 |
180.4 |
180.4 |
H20 |
C20 |
C21 |
H21 |
0.4 |
0.4 |
C20 |
C21 |
H21 |
C22 |
180.0 |
180.0 |
H21 |
C21 |
C20 |
H20 |
0.4 |
0.4 |
H21 |
C21 |
C22 |
C23 |
179.3 |
179.3 |
H21 |
C21 |
C22 |
H22 |
359.3 |
359.3 |
C21 |
C22 |
H22 |
C23 |
180.0 |
180.0 |
H22 |
C22 |
C21 |
H21 |
359.3 |
359.3 |
H22 |
C22 |
C23 |
F24 |
1.2 |
1.2 |
N10 |
N11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
N11 |
C12 |
C13 |
180.5 |
180.5 |
H11 |
N11 |
C12 |
H12 |
0.5 |
0.5 |
C13 |
N14 |
H14 |
C15 |
180.0 |
180.0 |
H14 |
N14 |
C15 |
O16 |
182.6 |
182.6 |
H14 |
N14 |
C15 |
C17 |
359.9 |
359.9 |