PDB Chemical Component LZ8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LZ8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
F1 |
C2 |
1.347 |
1.351 |
C2 |
C3 |
1.382 |
1.384 |
C2 |
C26 |
1.380 |
1.385 |
C3 |
C4 |
1.384 |
1.381 |
C4 |
C5 |
1.400 |
1.388 |
C5 |
N6 |
1.408 |
1.400 |
C5 |
C25 |
1.397 |
1.388 |
N6 |
C7 |
1.338 |
1.348 |
C7 |
O8 |
1.231 |
1.216 |
C7 |
C9 |
1.481 |
1.474 |
C9 |
N10 |
1.328 |
1.319 |
C9 |
C13 |
1.404 |
1.419 |
N10 |
N11 |
1.359 |
1.284 |
N11 |
C12 |
1.329 |
1.358 |
C12 |
C13 |
1.384 |
1.360 |
C13 |
N14 |
1.383 |
1.403 |
N14 |
C15 |
1.353 |
1.348 |
C15 |
O16 |
1.232 |
1.215 |
C15 |
C17 |
1.496 |
1.478 |
C17 |
C18 |
1.389 |
1.396 |
C17 |
C23 |
1.392 |
1.395 |
C18 |
C20 |
1.383 |
1.379 |
C20 |
C21 |
1.381 |
1.384 |
C21 |
C22 |
1.381 |
1.383 |
C22 |
C23 |
1.383 |
1.379 |
C25 |
C26 |
1.381 |
1.382 |
C3 |
H3 |
1.080 |
1.080 |
C26 |
H26 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
N6 |
H6 |
1.000 |
0.970 |
C25 |
H25 |
1.080 |
1.080 |
N11 |
H11 |
1.000 |
0.970 |
N14 |
H14 |
1.000 |
0.970 |
C12 |
H12 |
1.080 |
1.080 |
C18 |
H18 |
1.080 |
1.079 |
C23 |
H23 |
1.080 |
1.081 |
C20 |
H20 |
1.080 |
1.080 |
C21 |
H21 |
1.080 |
1.080 |
C22 |
H22 |
1.080 |
1.080 |
Bond Angles for LZ8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
F1 |
C2 |
C3 |
119.3 |
120.0 |
F1 |
C2 |
C26 |
118.9 |
119.9 |
C3 |
C2 |
C26 |
121.8 |
120.1 |
C2 |
C3 |
C4 |
119.1 |
120.1 |
C2 |
C3 |
H3 |
120.5 |
120.0 |
C2 |
C26 |
C25 |
119.2 |
120.0 |
C2 |
C26 |
H26 |
120.4 |
120.0 |
C3 |
C4 |
C5 |
120.1 |
119.9 |
C4 |
C3 |
H3 |
120.5 |
120.0 |
C3 |
C4 |
H4 |
119.9 |
120.0 |
C4 |
C5 |
N6 |
120.4 |
120.0 |
C4 |
C5 |
C25 |
119.5 |
119.9 |
C5 |
C4 |
H4 |
119.9 |
120.0 |
N6 |
C5 |
C25 |
120.1 |
120.1 |
C5 |
N6 |
C7 |
123.9 |
120.0 |
C5 |
N6 |
H6 |
118.0 |
120.0 |
C5 |
C25 |
C26 |
120.3 |
120.0 |
C5 |
C25 |
H25 |
119.8 |
120.1 |
N6 |
C7 |
O8 |
122.1 |
120.0 |
N6 |
C7 |
C9 |
116.5 |
120.0 |
C7 |
N6 |
H6 |
118.0 |
120.0 |
O8 |
C7 |
C9 |
121.4 |
120.0 |
C7 |
C9 |
N10 |
120.3 |
126.5 |
C7 |
C9 |
C13 |
129.6 |
126.5 |
N10 |
C9 |
C13 |
110.1 |
107.0 |
C9 |
N10 |
N11 |
105.7 |
110.3 |
C9 |
C13 |
C12 |
105.4 |
105.5 |
C9 |
C13 |
N14 |
124.7 |
127.3 |
N10 |
N11 |
C12 |
112.1 |
110.2 |
N10 |
N11 |
H11 |
123.9 |
124.9 |
N11 |
C12 |
C13 |
106.7 |
107.0 |
C12 |
N11 |
H11 |
124.0 |
124.9 |
N11 |
C12 |
H12 |
126.6 |
126.5 |
C12 |
C13 |
N14 |
129.9 |
127.3 |
C13 |
C12 |
H12 |
126.6 |
126.5 |
C13 |
N14 |
C15 |
126.8 |
120.0 |
C13 |
N14 |
H14 |
116.6 |
120.0 |
N14 |
C15 |
O16 |
123.0 |
120.0 |
N14 |
C15 |
C17 |
115.7 |
120.0 |
C15 |
N14 |
H14 |
116.6 |
120.0 |
O16 |
C15 |
C17 |
121.4 |
120.1 |
C15 |
C17 |
C18 |
120.5 |
120.1 |
C15 |
C17 |
C23 |
120.4 |
120.2 |
C18 |
C17 |
C23 |
119.1 |
119.7 |
C17 |
C18 |
C20 |
120.3 |
119.8 |
C17 |
C18 |
H18 |
119.8 |
120.1 |
C17 |
C23 |
C22 |
120.4 |
119.8 |
C17 |
C23 |
H23 |
119.8 |
120.1 |
C18 |
C20 |
C21 |
120.1 |
120.2 |
C20 |
C18 |
H18 |
119.9 |
120.1 |
C18 |
C20 |
H20 |
119.9 |
119.9 |
C20 |
C21 |
C22 |
120.0 |
120.3 |
C21 |
C20 |
H20 |
120.0 |
119.9 |
C20 |
C21 |
H21 |
120.0 |
119.8 |
C21 |
C22 |
C23 |
120.0 |
120.2 |
C22 |
C21 |
H21 |
120.0 |
119.9 |
C21 |
C22 |
H22 |
120.0 |
119.9 |
C22 |
C23 |
H23 |
119.8 |
120.1 |
C23 |
C22 |
H22 |
120.0 |
119.9 |
C25 |
C26 |
H26 |
120.4 |
120.0 |
C26 |
C25 |
H25 |
119.9 |
119.9 |
Torsion Angles for LZ8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
F1 |
C26 |
180.6 |
180.2 |
F1 |
C2 |
C3 |
C4 |
179.3 |
180.0 |
F1 |
C2 |
C3 |
H3 |
359.3 |
0.0 |
F1 |
C2 |
C26 |
C25 |
181.1 |
179.7 |
F1 |
C2 |
C26 |
H26 |
1.1 |
360.0 |
F1 |
C2 |
C3 |
C26 |
179.4 |
179.8 |
C3 |
C2 |
C26 |
C25 |
0.5 |
359.5 |
C3 |
C2 |
C26 |
H26 |
180.5 |
179.7 |
C2 |
C3 |
C4 |
C5 |
359.4 |
360.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
179.4 |
180.0 |
F1 |
C2 |
C26 |
C3 |
180.6 |
180.2 |
C26 |
C2 |
C3 |
C4 |
360.0 |
0.3 |
C26 |
C2 |
C3 |
H3 |
180.0 |
180.2 |
C5 |
C25 |
C26 |
C2 |
359.7 |
0.5 |
C25 |
C26 |
C2 |
H26 |
180.0 |
179.7 |
C2 |
C26 |
C25 |
H25 |
179.7 |
180.3 |
C4 |
C3 |
C2 |
C26 |
360.0 |
0.3 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
N6 |
179.6 |
180.0 |
C3 |
C4 |
C5 |
C25 |
0.8 |
0.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H3 |
179.4 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
N6 |
C5 |
C4 |
C25 |
178.7 |
180.0 |
C4 |
C5 |
N6 |
C7 |
314.4 |
325.0 |
C4 |
C5 |
N6 |
H6 |
134.5 |
144.9 |
C4 |
C5 |
C25 |
C26 |
359.7 |
359.8 |
C4 |
C5 |
C25 |
H25 |
179.7 |
179.9 |
C4 |
C5 |
N6 |
C25 |
181.3 |
180.0 |
N6 |
C5 |
C4 |
H4 |
359.5 |
0.0 |
N6 |
C5 |
C25 |
C26 |
180.9 |
179.8 |
N6 |
C5 |
C25 |
H25 |
0.9 |
359.9 |
C5 |
N6 |
C7 |
O8 |
358.7 |
4.6 |
C5 |
N6 |
C7 |
C9 |
178.5 |
184.6 |
C7 |
N6 |
C5 |
H6 |
180.0 |
180.0 |
C2 |
C26 |
C25 |
C5 |
359.7 |
0.5 |
C4 |
C5 |
C25 |
N6 |
178.8 |
180.0 |
C25 |
C5 |
C4 |
H4 |
180.8 |
180.0 |
C25 |
C5 |
N6 |
C7 |
133.2 |
145.0 |
C25 |
C5 |
N6 |
H6 |
313.2 |
324.9 |
C5 |
C25 |
C26 |
H26 |
179.7 |
180.2 |
C26 |
C25 |
C5 |
H25 |
180.0 |
179.8 |
C7 |
N6 |
C5 |
C25 |
133.2 |
145.0 |
C5 |
N6 |
C7 |
H6 |
180.0 |
180.0 |
O8 |
C7 |
N6 |
C9 |
180.2 |
180.0 |
N6 |
C7 |
C9 |
N10 |
7.6 |
0.0 |
N6 |
C7 |
C9 |
C13 |
187.5 |
179.7 |
N6 |
C7 |
O8 |
C9 |
179.8 |
180.0 |
O8 |
C7 |
N6 |
H6 |
178.6 |
184.6 |
O8 |
C7 |
C9 |
N10 |
187.4 |
180.1 |
O8 |
C7 |
C9 |
C13 |
7.3 |
359.7 |
N6 |
C7 |
C9 |
O8 |
180.2 |
180.0 |
C9 |
C7 |
N6 |
H6 |
358.4 |
4.6 |
N10 |
C9 |
C7 |
C13 |
180.2 |
180.4 |
C7 |
C9 |
N10 |
N11 |
180.2 |
180.0 |
C7 |
C9 |
C13 |
C12 |
179.9 |
179.9 |
C7 |
C9 |
C13 |
N14 |
0.0 |
360.0 |
C7 |
C9 |
N10 |
C13 |
179.9 |
179.7 |
N10 |
C9 |
C13 |
C12 |
359.8 |
359.6 |
N10 |
C9 |
C13 |
N14 |
179.9 |
179.7 |
C9 |
N10 |
N11 |
C12 |
359.6 |
359.9 |
C9 |
N10 |
N11 |
H11 |
179.6 |
180.0 |
C7 |
C9 |
C13 |
N10 |
180.1 |
180.3 |
C13 |
C9 |
N10 |
N11 |
0.4 |
0.3 |
N11 |
C12 |
C13 |
C9 |
360.0 |
0.4 |
C12 |
C13 |
C9 |
N14 |
179.9 |
179.9 |
C9 |
C13 |
C12 |
H12 |
180.0 |
180.2 |
C9 |
C13 |
N14 |
C15 |
183.7 |
180.0 |
C9 |
C13 |
N14 |
H14 |
3.7 |
0.0 |
N11 |
N10 |
C9 |
C13 |
0.4 |
0.3 |
N10 |
N11 |
C12 |
C13 |
0.2 |
359.8 |
C12 |
N11 |
N10 |
H11 |
180.0 |
179.9 |
N10 |
N11 |
C12 |
H12 |
180.2 |
180.0 |
C9 |
C13 |
C12 |
N11 |
360.0 |
0.4 |
N10 |
N11 |
C12 |
H11 |
180.0 |
180.1 |
N11 |
C12 |
C13 |
N14 |
179.9 |
180.3 |
C13 |
C12 |
N11 |
H12 |
180.0 |
179.8 |
C9 |
C13 |
C12 |
N14 |
180.1 |
180.1 |
C13 |
C12 |
N11 |
H11 |
180.2 |
179.7 |
N11 |
C12 |
C13 |
H12 |
180.0 |
180.2 |
C12 |
C13 |
N14 |
C15 |
3.8 |
0.1 |
C12 |
C13 |
N14 |
H14 |
183.8 |
180.1 |
C9 |
C13 |
N14 |
C12 |
179.9 |
179.9 |
N14 |
C13 |
C12 |
H12 |
359.9 |
0.1 |
C13 |
N14 |
C15 |
O16 |
0.8 |
0.1 |
C13 |
N14 |
C15 |
C17 |
180.2 |
180.0 |
C15 |
N14 |
C13 |
H14 |
180.0 |
180.0 |
C13 |
N14 |
C15 |
H14 |
180.0 |
180.0 |
O16 |
C15 |
N14 |
C17 |
180.6 |
180.1 |
N14 |
C15 |
C17 |
C18 |
222.7 |
180.0 |
N14 |
C15 |
C17 |
C23 |
41.8 |
359.8 |
N14 |
C15 |
O16 |
C17 |
179.3 |
179.9 |
O16 |
C15 |
N14 |
H14 |
180.8 |
180.0 |
O16 |
C15 |
C17 |
C18 |
42.1 |
359.9 |
O16 |
C15 |
C17 |
C23 |
221.2 |
179.7 |
N14 |
C15 |
C17 |
O16 |
180.6 |
180.1 |
C17 |
C15 |
N14 |
H14 |
0.2 |
360.0 |
C18 |
C17 |
C15 |
C23 |
180.9 |
180.2 |
C15 |
C17 |
C18 |
C20 |
179.3 |
180.0 |
C15 |
C17 |
C18 |
H18 |
359.3 |
360.0 |
C15 |
C17 |
C23 |
C22 |
180.6 |
179.7 |
C15 |
C17 |
C23 |
H23 |
0.6 |
359.9 |
C15 |
C17 |
C18 |
C23 |
179.1 |
179.8 |
C18 |
C17 |
C23 |
C22 |
359.7 |
359.4 |
C18 |
C17 |
C23 |
H23 |
179.7 |
179.7 |
C17 |
C18 |
C20 |
C21 |
0.1 |
0.0 |
C20 |
C18 |
C17 |
H18 |
180.0 |
180.1 |
C17 |
C18 |
C20 |
H20 |
180.1 |
180.0 |
C15 |
C17 |
C23 |
C18 |
180.9 |
180.2 |
C23 |
C17 |
C18 |
C20 |
0.2 |
0.3 |
C23 |
C17 |
C18 |
H18 |
180.2 |
180.2 |
C21 |
C22 |
C23 |
C17 |
0.1 |
0.6 |
C22 |
C23 |
C17 |
H23 |
180.0 |
179.8 |
C17 |
C23 |
C22 |
H22 |
180.1 |
180.3 |
C20 |
C18 |
C17 |
C23 |
0.2 |
0.3 |
C17 |
C18 |
C20 |
H18 |
180.0 |
179.9 |
C18 |
C20 |
C21 |
C22 |
359.7 |
360.0 |
C21 |
C20 |
C18 |
H20 |
180.0 |
180.0 |
C18 |
C20 |
C21 |
H21 |
179.7 |
180.0 |
C21 |
C20 |
C18 |
H18 |
180.1 |
180.1 |
C18 |
C20 |
C21 |
H20 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
C23 |
0.2 |
359.7 |
C22 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
H22 |
180.2 |
180.0 |
C17 |
C23 |
C22 |
C21 |
0.1 |
0.6 |
C22 |
C21 |
C20 |
H20 |
179.7 |
180.0 |
C20 |
C21 |
C22 |
H21 |
180.0 |
180.0 |
C21 |
C22 |
C23 |
H23 |
180.1 |
180.3 |
C23 |
C22 |
C21 |
H22 |
180.0 |
179.7 |
C17 |
C23 |
C22 |
H23 |
180.0 |
180.2 |
C23 |
C22 |
C21 |
H21 |
180.2 |
179.7 |
C21 |
C22 |
C23 |
H22 |
180.0 |
180.3 |
C2 |
C26 |
C25 |
H26 |
180.0 |
180.3 |
C5 |
C25 |
C26 |
H25 |
180.0 |
180.2 |
H3 |
C3 |
C2 |
C26 |
180.0 |
180.2 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
179.4 |
180.0 |
H3 |
C3 |
C4 |
H4 |
359.4 |
0.0 |
C2 |
C26 |
H26 |
C25 |
180.0 |
179.7 |
H26 |
C26 |
C25 |
H25 |
359.7 |
0.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.4 |
0.0 |
H4 |
C4 |
C5 |
N6 |
359.5 |
0.0 |
H4 |
C4 |
C5 |
C25 |
180.8 |
180.0 |
H6 |
N6 |
C5 |
C25 |
313.2 |
324.9 |
C5 |
N6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
N6 |
C7 |
O8 |
178.6 |
184.6 |
H6 |
N6 |
C7 |
C9 |
358.4 |
4.6 |
C5 |
C25 |
H25 |
C26 |
180.0 |
179.8 |
H25 |
C25 |
C26 |
H26 |
359.7 |
0.0 |
N10 |
N11 |
H11 |
C12 |
180.0 |
179.9 |
H11 |
N11 |
C12 |
C13 |
180.2 |
179.7 |
H11 |
N11 |
C12 |
H12 |
0.2 |
359.9 |
C13 |
N14 |
H14 |
C15 |
180.0 |
180.0 |
H14 |
N14 |
C15 |
O16 |
180.8 |
180.0 |
H14 |
N14 |
C15 |
C17 |
0.2 |
360.0 |
N11 |
C12 |
H12 |
C13 |
180.0 |
179.7 |
H12 |
C12 |
N11 |
H11 |
0.2 |
359.9 |
H12 |
C12 |
C13 |
N14 |
359.9 |
0.1 |
H18 |
C18 |
C17 |
C23 |
180.2 |
180.2 |
C17 |
C18 |
H18 |
C20 |
180.0 |
180.1 |
H18 |
C18 |
C20 |
C21 |
180.1 |
180.1 |
H18 |
C18 |
C20 |
H20 |
0.1 |
0.1 |
C17 |
C23 |
H23 |
C22 |
180.0 |
179.8 |
H23 |
C23 |
C22 |
H22 |
0.1 |
0.0 |
C18 |
C20 |
H20 |
C21 |
180.0 |
180.0 |
H20 |
C20 |
C18 |
H18 |
0.1 |
0.1 |
H20 |
C20 |
C21 |
C22 |
179.7 |
180.0 |
H20 |
C20 |
C21 |
H21 |
359.7 |
0.0 |
C20 |
C21 |
H21 |
C22 |
180.0 |
180.0 |
H21 |
C21 |
C20 |
H20 |
359.7 |
0.0 |
H21 |
C21 |
C22 |
C23 |
180.2 |
179.7 |
H21 |
C21 |
C22 |
H22 |
0.2 |
0.0 |
C21 |
C22 |
H22 |
C23 |
180.0 |
179.7 |
H22 |
C22 |
C21 |
H21 |
0.2 |
0.0 |
H22 |
C22 |
C23 |
H23 |
0.1 |
0.0 |