PDB Chemical Component LZ5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LZ5
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C2 |
1.197 |
1.197 |
C2 |
N3 |
1.346 |
1.346 |
C2 |
C10 |
1.468 |
1.468 |
N3 |
C4 |
1.400 |
1.400 |
C4 |
C5 |
1.396 |
1.396 |
C4 |
C9 |
1.392 |
1.392 |
C5 |
C6 |
1.381 |
1.381 |
C6 |
C7 |
1.382 |
1.382 |
C7 |
C8 |
1.381 |
1.381 |
C8 |
C9 |
1.378 |
1.378 |
C10 |
C11 |
1.389 |
1.389 |
C10 |
N15 |
1.307 |
1.307 |
C11 |
C12 |
1.349 |
1.349 |
C12 |
N13 |
1.344 |
1.344 |
N13 |
N15 |
1.356 |
1.356 |
N3 |
H3 |
1.000 |
1.000 |
C5 |
H5 |
1.080 |
1.080 |
C9 |
H9 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
C8 |
H8 |
1.079 |
1.079 |
C11 |
H11 |
1.080 |
1.080 |
N13 |
H13 |
1.000 |
1.000 |
C12 |
H12 |
1.080 |
1.080 |
Bond Angles for LZ5
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C2 |
N3 |
122.8 |
122.8 |
O1 |
C2 |
C10 |
120.9 |
120.9 |
N3 |
C2 |
C10 |
116.3 |
116.3 |
C2 |
N3 |
C4 |
126.5 |
126.5 |
C2 |
N3 |
H3 |
116.7 |
116.7 |
C2 |
C10 |
C11 |
127.2 |
127.2 |
C2 |
C10 |
N15 |
120.7 |
120.7 |
N3 |
C4 |
C5 |
120.5 |
120.5 |
N3 |
C4 |
C9 |
120.4 |
120.4 |
C4 |
N3 |
H3 |
116.7 |
116.7 |
C5 |
C4 |
C9 |
119.2 |
119.2 |
C4 |
C5 |
C6 |
120.2 |
120.2 |
C4 |
C5 |
H5 |
119.9 |
119.9 |
C4 |
C9 |
C8 |
120.2 |
120.2 |
C4 |
C9 |
H9 |
119.9 |
119.9 |
C5 |
C6 |
C7 |
120.0 |
120.0 |
C6 |
C5 |
H5 |
119.9 |
119.9 |
C5 |
C6 |
H6 |
120.0 |
120.0 |
C6 |
C7 |
C8 |
120.2 |
120.2 |
C7 |
C6 |
H6 |
120.0 |
120.0 |
C6 |
C7 |
H7 |
119.9 |
119.9 |
C7 |
C8 |
C9 |
120.2 |
120.2 |
C8 |
C7 |
H7 |
119.9 |
119.9 |
C7 |
C8 |
H8 |
119.9 |
119.9 |
C8 |
C9 |
H9 |
119.9 |
119.9 |
C9 |
C8 |
H8 |
119.9 |
119.9 |
C11 |
C10 |
N15 |
112.0 |
112.0 |
C10 |
C11 |
C12 |
105.1 |
105.1 |
C10 |
C11 |
H11 |
127.4 |
127.4 |
C10 |
N15 |
N13 |
104.3 |
104.3 |
C11 |
C12 |
N13 |
106.9 |
106.9 |
C12 |
C11 |
H11 |
127.5 |
127.5 |
C11 |
C12 |
H12 |
126.6 |
126.6 |
C12 |
N13 |
N15 |
111.6 |
111.6 |
C12 |
N13 |
H13 |
124.2 |
124.2 |
N13 |
C12 |
H12 |
126.5 |
126.5 |
N15 |
N13 |
H13 |
124.2 |
124.2 |
Torsion Angles for LZ5
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N3 |
C2 |
O1 |
C10 |
177.6 |
177.6 |
O1 |
C2 |
N3 |
C4 |
350.6 |
350.6 |
O1 |
C2 |
N3 |
H3 |
170.6 |
170.6 |
O1 |
C2 |
C10 |
C11 |
2.6 |
2.6 |
O1 |
C2 |
C10 |
N15 |
180.4 |
180.4 |
O1 |
C2 |
N3 |
C10 |
182.3 |
182.3 |
N3 |
C2 |
C10 |
C11 |
184.8 |
184.8 |
N3 |
C2 |
C10 |
N15 |
2.6 |
2.6 |
C2 |
N3 |
C4 |
C5 |
322.2 |
322.2 |
C2 |
N3 |
C4 |
C9 |
142.7 |
142.7 |
C4 |
N3 |
C2 |
H3 |
180.0 |
180.0 |
O1 |
C2 |
C10 |
N3 |
177.8 |
177.8 |
C10 |
C2 |
N3 |
C4 |
168.3 |
168.3 |
C10 |
C2 |
N3 |
H3 |
348.3 |
348.3 |
C11 |
C10 |
C2 |
N15 |
182.2 |
182.2 |
C2 |
C10 |
C11 |
C12 |
179.1 |
179.1 |
C2 |
C10 |
C11 |
H11 |
359.1 |
359.1 |
C2 |
C10 |
N15 |
N13 |
180.7 |
180.7 |
C4 |
N3 |
C2 |
C10 |
168.3 |
168.3 |
C2 |
N3 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
N3 |
C9 |
179.6 |
179.6 |
N3 |
C4 |
C5 |
C6 |
179.8 |
179.8 |
N3 |
C4 |
C5 |
H5 |
359.9 |
359.9 |
N3 |
C4 |
C9 |
C8 |
180.3 |
180.3 |
N3 |
C4 |
C9 |
H9 |
0.3 |
0.3 |
N3 |
C4 |
C5 |
C9 |
180.4 |
180.4 |
C5 |
C4 |
N3 |
H3 |
142.3 |
142.3 |
C5 |
C4 |
C9 |
C8 |
0.8 |
0.8 |
C5 |
C4 |
C9 |
H9 |
180.8 |
180.8 |
C4 |
C5 |
C6 |
C7 |
0.4 |
0.4 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H6 |
180.4 |
180.4 |
N3 |
C4 |
C9 |
C5 |
179.6 |
179.6 |
C9 |
C4 |
N3 |
H3 |
322.7 |
322.7 |
C9 |
C4 |
C5 |
C6 |
359.4 |
359.4 |
C9 |
C4 |
C5 |
H5 |
179.4 |
179.4 |
C7 |
C8 |
C9 |
C4 |
359.3 |
359.3 |
C8 |
C9 |
C4 |
H9 |
180.0 |
180.0 |
C4 |
C9 |
C8 |
H8 |
179.3 |
179.3 |
C6 |
C5 |
C4 |
C9 |
359.4 |
359.4 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
C8 |
359.7 |
359.7 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
H7 |
179.7 |
179.7 |
C7 |
C6 |
C5 |
H5 |
180.4 |
180.4 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
C9 |
0.5 |
0.5 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
H8 |
180.5 |
180.5 |
C4 |
C9 |
C8 |
C7 |
359.3 |
359.3 |
C8 |
C7 |
C6 |
H6 |
179.7 |
179.7 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H9 |
179.3 |
179.3 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C4 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
H7 |
180.5 |
180.5 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
C2 |
C10 |
C11 |
N15 |
178.0 |
178.0 |
C11 |
C10 |
N15 |
N13 |
358.8 |
358.8 |
C10 |
C11 |
C12 |
N13 |
359.5 |
359.5 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H12 |
179.5 |
179.4 |
C2 |
C10 |
N15 |
C11 |
181.9 |
181.9 |
N15 |
C10 |
C11 |
C12 |
1.1 |
1.1 |
N15 |
C10 |
C11 |
H11 |
181.1 |
181.1 |
C12 |
N13 |
N15 |
C10 |
0.8 |
0.8 |
C10 |
N15 |
N13 |
H13 |
180.8 |
180.8 |
C12 |
C11 |
C10 |
N15 |
1.1 |
1.1 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
C11 |
C12 |
N13 |
N15 |
359.8 |
359.8 |
C11 |
C12 |
N13 |
H13 |
179.8 |
179.8 |
N13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C10 |
N15 |
N13 |
C12 |
0.8 |
0.8 |
N13 |
C12 |
C11 |
H11 |
179.5 |
179.5 |
C11 |
C12 |
N13 |
H12 |
180.0 |
180.0 |
N15 |
N13 |
C12 |
H13 |
180.0 |
180.0 |
C12 |
N13 |
N15 |
H13 |
180.0 |
180.0 |
N15 |
N13 |
C12 |
H12 |
179.8 |
179.9 |
H3 |
N3 |
C2 |
C10 |
348.3 |
348.3 |
C2 |
N3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
N3 |
C4 |
C5 |
142.3 |
142.3 |
H3 |
N3 |
C4 |
C9 |
322.7 |
322.7 |
H5 |
C5 |
C4 |
C9 |
179.4 |
179.4 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
C7 |
180.4 |
180.4 |
H5 |
C5 |
C6 |
H6 |
0.4 |
0.4 |
C4 |
C9 |
H9 |
C8 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
H8 |
359.3 |
359.3 |
C5 |
C6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.4 |
0.4 |
H6 |
C6 |
C7 |
C8 |
179.7 |
179.7 |
H6 |
C6 |
C7 |
H7 |
359.7 |
359.7 |
C6 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
H7 |
C7 |
C6 |
H6 |
359.7 |
359.7 |
H7 |
C7 |
C8 |
C9 |
180.5 |
180.5 |
H7 |
C7 |
C8 |
H8 |
0.5 |
0.5 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
H7 |
0.5 |
0.5 |
H8 |
C8 |
C9 |
H9 |
359.3 |
359.3 |
H11 |
C11 |
C10 |
N15 |
181.1 |
181.1 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
N13 |
179.5 |
179.5 |
H11 |
C11 |
C12 |
H12 |
359.5 |
359.4 |
C12 |
N13 |
H13 |
N15 |
180.0 |
180.0 |
H13 |
N13 |
C12 |
H12 |
359.8 |
359.8 |
C11 |
C12 |
H12 |
N13 |
180.0 |
180.0 |
H12 |
C12 |
C11 |
H11 |
359.5 |
359.4 |
H12 |
C12 |
N13 |
N15 |
179.8 |
179.9 |
H12 |
C12 |
N13 |
H13 |
359.8 |
359.8 |