PDB Chemical Component LY1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LY1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N1	1.506	1.467
C1	C8A	1.510	1.511
C1	HC11	1.116	1.088
C1	HC12	1.115	1.089
N1	C2	1.490	1.469
N1	HN11	1.020	1.009
C2	C3	1.523	1.518
C2	HC21	1.115	1.091
C2	HC22	1.115	1.089
C3	C4	1.520	1.532
C3	HC31	1.115	1.090
C3	HC32	1.115	1.090
C4	C4A	1.504	1.505
C4	HC41	1.115	1.091
C4	HC42	1.115	1.090
C4A	C5	1.382	1.387
C4A	C8A	1.406	1.375
C5	C6	1.384	1.379
C5	HC51	1.103	1.080
C6	C7	1.398	1.383
C6	HC61	1.103	1.081
C7	C8	1.431	1.380
C7	CL1	1.470	1.736
C8	C8A	1.417	1.392
C8	CL2	1.514	1.736

Bond Angles for LY1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	C8A	111.1	111.6
N1	C1	HC11	111.6	109.0
N1	C1	HC12	111.6	109.0
C1	N1	C2	112.6	106.7
C1	N1	HN11	111.0	106.7
C8A	C1	HC11	111.6	109.1
C8A	C1	HC12	111.6	109.0
C1	C8A	C4A	118.1	123.7
C1	C8A	C8	121.1	117.1
HC11	C1	HC12	98.8	109.0
C2	N1	HN11	111.1	106.8
N1	C2	C3	112.4	110.4
N1	C2	HC21	111.2	109.3
N1	C2	HC22	111.1	109.4
C3	C2	HC21	111.2	109.3
C3	C2	HC22	111.1	109.4
C2	C3	C4	112.7	107.8
C2	C3	HC31	111.0	109.8
C2	C3	HC32	111.0	109.8
HC21	C2	HC22	99.2	109.1
C4	C3	HC31	111.0	109.8
C4	C3	HC32	111.1	109.8
C3	C4	C4A	114.3	109.7
C3	C4	HC41	110.4	109.4
C3	C4	HC42	110.4	109.4
HC31	C3	HC32	99.3	109.8
C4A	C4	HC41	110.5	109.4
C4A	C4	HC42	110.5	109.4
C4	C4A	C5	118.9	118.5
C4	C4A	C8A	120.5	121.2
HC41	C4	HC42	99.8	109.4
C5	C4A	C8A	120.6	120.3
C4A	C5	C6	119.8	120.4
C4A	C5	HC51	120.0	119.8
C4A	C8A	C8	120.8	119.2
C6	C5	HC51	120.2	119.9
C5	C6	C7	121.1	119.6
C5	C6	HC61	118.9	120.1
C7	C6	HC61	120.0	120.2
C6	C7	C8	120.3	119.9
C6	C7	CL1	116.1	120.1
C8	C7	CL1	123.6	120.0
C7	C8	C8A	117.3	120.6
C7	C8	CL2	123.2	119.7
C8A	C8	CL2	119.5	119.7

Torsion Angles for LY1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C8A	C1	N1	HC11	125.2	239.4
C8A	C1	N1	HC12	234.7	120.5
N1	C1	C8A	C4A	292.5	30.0
N1	C1	C8A	C8	112.4	210.0
HC11	C1	N1	HC12	109.5	241.1
C2	N1	C1	HN11	125.3	113.8
C1	N1	C2	C3	289.8	62.6
C1	N1	C2	HC21	164.5	302.4
C1	N1	C2	HC22	55.0	183.1
N1	C1	C8A	HC11	234.7	120.5
N1	C1	C8A	HC12	125.3	239.5
C8A	C1	N1	C2	89.5	266.4
C8A	C1	N1	HN11	324.2	152.6
HC11	C1	C8A	HC12	250.5	119.0
C4	C4A	C8A	C1	359.5	358.4
C5	C4A	C8A	C1	179.7	179.0
C4A	C8A	C1	C8	180.1	180.0
C7	C8	C8A	C1	180.4	181.1
C1	C8A	C8	CL2	1.7	0.8
N1	C1	HC11	C8A	125.0	237.9
N1	C1	HC11	HC12	242.5	118.9
HC11	C1	N1	C2	324.3	27.0
HC11	C1	N1	HN11	199.0	273.1
C8A	C1	HC11	HC12	117.5	241.0
HC11	C1	C8A	C4A	57.8	269.5
HC11	C1	C8A	C8	237.7	89.4
N1	C1	HC12	C8A	235.0	122.1
N1	C1	HC12	HC11	117.5	241.1
HC12	C1	N1	C2	214.8	145.9
HC12	C1	N1	HN11	89.5	32.0
C8A	C1	HC12	HC11	242.5	119.0
HC12	C1	C8A	C4A	167.3	150.5
HC12	C1	C8A	C8	347.2	330.5
C2	N1	C1	C8A	89.5	266.4
C2	N1	C1	HC11	324.3	27.0
C2	N1	C1	HC12	214.8	145.9
C1	N1	C2	HN11	234.7	246.2
C3	C2	N1	HC21	125.3	120.2
C3	C2	N1	HC22	234.7	239.6
N1	C2	C3	C4	64.8	33.3
N1	C2	C3	HC31	299.6	273.7
N1	C2	C3	HC32	190.1	152.8
HC21	C2	N1	HC22	109.5	119.4
HN11	N1	C1	C8A	324.2	152.6
HN11	N1	C1	HC11	199.0	273.1
HN11	N1	C1	HC12	89.5	32.0
C1	N1	HN11	C2	126.1	113.8
HN11	N1	C2	C3	55.0	176.4
HN11	N1	C2	HC21	289.7	56.2
HN11	N1	C2	HC22	180.3	296.8
C3	C2	N1	HN11	55.0	176.4
N1	C2	C3	HC21	234.7	239.8
N1	C2	C3	HC22	125.3	120.4
HC21	C2	C3	HC22	250.5	240.6
C4	C3	C2	HC31	125.3	119.6
C4	C3	C2	HC32	234.7	240.5
C2	C3	C4	C4A	279.0	267.5
C2	C3	C4	HC41	153.7	147.4
C2	C3	C4	HC42	44.3	27.6
HC31	C3	C2	HC32	109.5	120.9
HC21	C2	N1	HN11	289.7	56.2
N1	C2	HC21	C3	126.0	120.9
N1	C2	HC21	HC22	243.0	240.4
C3	C2	HC21	HC22	117.0	119.5
HC21	C2	C3	C4	190.1	153.5
HC21	C2	C3	HC31	64.9	33.9
HC21	C2	C3	HC32	315.4	273.0
HC22	C2	N1	HN11	180.3	296.8
N1	C2	HC22	C3	234.1	239.0
N1	C2	HC22	HC21	117.0	119.5
C3	C2	HC22	HC21	243.0	240.5
HC22	C2	C3	C4	299.6	272.8
HC22	C2	C3	HC31	174.3	153.2
HC22	C2	C3	HC32	64.9	32.4
C4	C3	C2	HC21	190.1	153.5
C4	C3	C2	HC22	299.6	272.8
C2	C3	C4	HC31	234.7	240.4
C2	C3	C4	HC32	125.3	119.5
HC31	C3	C4	HC32	250.5	239.1
C4A	C4	C3	HC41	125.2	120.1
C4A	C4	C3	HC42	234.7	239.9
C3	C4	C4A	C5	246.4	228.1
C3	C4	C4A	C8A	66.6	48.7
HC41	C4	C3	HC42	109.5	119.8
HC31	C3	C2	HC21	64.9	33.9
HC31	C3	C2	HC22	174.3	153.2
C2	C3	HC31	C4	126.2	118.4
C2	C3	HC31	HC32	243.1	239.2
C4	C3	HC31	HC32	116.9	120.8
HC31	C3	C4	C4A	44.2	27.1
HC31	C3	C4	HC41	279.0	267.0
HC31	C3	C4	HC42	169.5	147.2
HC32	C3	C2	HC21	315.4	273.0
HC32	C3	C2	HC22	64.9	32.4
C2	C3	HC32	C4	233.8	241.7
C2	C3	HC32	HC31	116.9	120.9
C4	C3	HC32	HC31	243.1	239.2
HC32	C3	C4	C4A	153.7	148.0
HC32	C3	C4	HC41	28.5	27.9
HC32	C3	C4	HC42	279.0	268.1
C1	C8A	C4A	C4	359.5	358.4
C4A	C4	C3	HC31	44.2	27.1
C4A	C4	C3	HC32	153.7	148.0
C3	C4	C4A	HC41	234.8	239.9
C3	C4	C4A	HC42	125.2	120.1
HC41	C4	C4A	HC42	250.5	240.1
C5	C4A	C4	C8A	179.8	179.4
C4	C4A	C5	C6	180.0	181.0
C4	C4A	C5	HC51	360.0	1.0
C4	C4A	C8A	C8	179.6	178.4
HC41	C4	C3	HC31	279.0	267.0
HC41	C4	C3	HC32	28.5	27.9
C3	C4	HC41	C4A	127.4	120.2
C3	C4	HC41	HC42	243.7	240.1
C4A	C4	HC41	HC42	116.3	119.9
HC41	C4	C4A	C5	11.7	348.2
HC41	C4	C4A	C8A	191.8	168.8
HC42	C4	C3	HC31	169.5	147.2
HC42	C4	C3	HC32	279.0	268.1
C3	C4	HC42	C4A	232.6	239.8
C3	C4	HC42	HC41	116.3	119.9
C4A	C4	HC42	HC41	243.7	240.1
HC42	C4	C4A	C5	121.2	108.1
HC42	C4	C4A	C8A	301.3	288.7
C1	C8A	C4A	C5	179.7	179.0
C5	C4A	C4	HC41	11.7	348.2
C5	C4A	C4	HC42	121.2	108.1
C4	C4A	C5	C8A	180.2	180.6
C5	C4A	C8A	C8	359.8	359.0
C6	C5	C4A	HC51	180.0	180.0
C4A	C5	C6	C7	0.4	0.2
C4A	C5	C6	HC61	180.4	180.3
C4A	C8A	C1	HC11	57.8	269.5
C4A	C8A	C1	HC12	167.3	150.5
C1	C8A	C4A	C8	179.9	180.0
C8A	C4A	C4	HC41	191.8	168.8
C8A	C4A	C4	HC42	301.3	288.7
C4	C4A	C8A	C5	179.8	179.4
C8A	C4A	C5	C6	359.9	0.3
C8A	C4A	C5	HC51	179.8	180.4
C7	C8	C8A	C4A	0.3	1.1
C4A	C8A	C8	CL2	181.6	180.8
C6	C5	C4A	C8A	359.9	0.3
C4A	C5	C6	HC51	180.0	180.0
C7	C6	C5	HC61	180.0	180.0
C5	C6	C7	C8	359.7	359.9
C5	C6	C7	CL1	181.1	179.6
HC51	C5	C4A	C8A	179.8	180.4
C4A	C5	HC51	C6	180.0	180.0
HC51	C5	C6	C7	180.4	180.2
HC51	C5	C6	HC61	0.5	0.2
C7	C6	C5	HC51	180.4	180.2
C5	C6	C7	HC61	180.0	180.0
C8	C7	C6	CL1	178.6	180.3
C6	C7	C8	C8A	359.9	359.5
C6	C7	C8	CL2	178.6	179.7
HC61	C6	C5	HC51	0.5	0.2
C5	C6	HC61	C7	180.0	180.0
HC61	C6	C7	C8	179.7	179.8
HC61	C6	C7	CL1	1.1	359.5
C1	C8A	C8	C7	180.4	181.1
C4A	C8A	C8	C7	0.3	1.1
C8	C7	C6	HC61	179.7	179.8
C6	C7	C8	CL1	181.5	179.7
C8A	C8	C7	CL2	181.3	179.7
CL1	C7	C6	HC61	1.1	359.5
C6	C7	CL1	C8	178.5	180.3
CL1	C7	C8	C8A	178.4	179.8
CL1	C7	C8	CL2	357.1	0.0
C8	C8A	C1	HC11	237.7	89.4
C8	C8A	C1	HC12	347.2	330.5
C1	C8A	C8	C4A	180.1	180.0
C8A	C8	C7	CL1	178.4	179.8
C7	C8	C8A	CL2	178.7	180.3
CL2	C8	C7	CL1	357.1	0.0
C7	C8	CL2	C8A	181.3	179.7