PDB Chemical Component LXC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LXC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C5 O5 1.450 1.425
C5 C4 1.451 1.530
C5 H51 1.114 1.090
C5 H52 1.115 1.091
O5 C1 1.527 1.426
C1 O1 1.441 1.428
C1 C2 1.548 1.530
C1 H1 1.115 1.089
O1 HO1 0.950 0.966
C2 O2 1.463 1.428
C2 C3 1.533 1.532
C2 H2 1.115 1.090
O2 HO2 0.950 0.968
C3 O3 1.470 1.428
C3 C4 1.561 1.533
C3 H3 1.115 1.091
O3 HO3 0.950 0.967
C4 O4 1.436 1.429
C4 H4 1.115 1.090
O4 HO4 0.950 0.966

Bond Angles for LXC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O5 C5 C4 110.6 109.8
O5 C5 H51 111.8 109.5
O5 C5 H52 111.8 109.4
C5 O5 C1 110.7 107.7
C4 C5 H51 111.8 109.4
C4 C5 H52 111.8 109.3
C5 C4 C3 110.1 109.1
C5 C4 O4 111.1 109.6
C5 C4 H4 108.8 109.5
H51 C5 H52 98.6 109.3
O5 C1 O1 109.9 109.4
O5 C1 C2 107.7 109.8
O5 C1 H1 110.0 109.4
O1 C1 C2 109.4 109.4
O1 C1 H1 109.9 109.4
C1 O1 HO1 109.8 106.9
C2 C1 H1 109.9 109.4
C1 C2 O2 112.3 109.6
C1 C2 C3 109.4 109.1
C1 C2 H2 108.6 109.5
O2 C2 C3 109.4 109.7
O2 C2 H2 108.6 109.5
C2 O2 HO2 112.2 106.8
C3 C2 H2 108.6 109.4
C2 C3 O3 110.6 109.7
C2 C3 C4 109.6 108.7
C2 C3 H3 108.4 109.5
O3 C3 C4 111.4 109.9
O3 C3 H3 108.4 109.6
C3 O3 HO3 111.4 106.9
C4 C3 H3 108.4 109.4
C3 C4 O4 109.4 109.6
C3 C4 H4 108.7 109.5
O4 C4 H4 108.7 109.5
C4 O4 HO4 111.1 106.8

Torsion Angles for LXC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C5 O5 H51 125.3 120.2
C4 C5 O5 H52 234.7 240.0
O5 C5 C4 C3 60.9 61.1
O5 C5 C4 O4 182.2 181.1
O5 C5 C4 H4 301.9 301.3
H51 C5 O5 H52 109.5 119.8
C5 O5 C1 O1 180.6 187.7
C5 O5 C1 C2 61.6 67.6
C5 O5 C1 H1 301.8 307.5
O5 C5 C4 H51 234.7 239.8
O5 C5 C4 H52 125.3 120.1
C4 C5 O5 C1 295.5 292.4
H51 C5 C4 H52 250.5 240.3
C2 C3 C4 C5 303.3 306.5
O3 C3 C4 C5 180.5 186.5
C5 C4 C3 H3 61.3 66.1
C3 C4 C5 O4 238.7 240.0
C3 C4 C5 H4 119.0 119.8
O4 C4 C5 H4 240.4 239.8
C5 C4 O4 HO4 180.0 60.1
O5 C5 H51 C4 124.6 120.4
O5 C5 H51 H52 242.3 240.1
H51 C5 O5 C1 170.2 172.3
C4 C5 H51 H52 117.7 119.7
H51 C5 C4 C3 186.2 181.3
H51 C5 C4 O4 307.5 301.3
H51 C5 C4 H4 67.1 61.5
O5 C5 H52 C4 235.4 239.7
O5 C5 H52 H51 117.7 119.9
H52 C5 O5 C1 60.7 52.5
C4 C5 H52 H51 242.3 240.2
H52 C5 C4 C3 295.6 301.0
H52 C5 C4 O4 57.0 61.0
H52 C5 C4 H4 176.6 181.2
C1 O5 C5 C4 295.5 292.4
C1 O5 C5 H51 170.2 172.3
C1 O5 C5 H52 60.7 52.5
O1 C1 O5 C2 119.0 120.1
O1 C1 O5 H1 238.8 240.2
O5 C1 O1 HO1 180.0 59.9
C2 C1 O5 H1 119.8 120.0
O5 C1 C2 O2 181.1 178.8
O5 C1 C2 C3 302.7 298.9
O5 C1 C2 H2 61.0 58.6
O5 C1 O1 C2 242.0 239.7
O5 C1 O1 H1 121.2 119.9
C2 C1 O1 H1 239.2 240.2
O1 C1 C2 O2 61.7 58.7
O1 C1 C2 C3 183.3 178.8
O1 C1 C2 H2 301.7 298.5
O5 C1 C2 O1 119.4 120.1
O5 C1 C2 H1 240.2 239.9
O1 C1 C2 H1 120.8 119.8
C2 C1 O1 HO1 298.0 180.3
O2 C2 C1 C3 238.4 239.9
O2 C2 C1 H2 120.0 120.2
C1 C2 O2 HO2 180.0 300.0
C3 C2 C1 H2 241.7 240.3
C1 C2 C3 O3 178.6 173.7
C1 C2 C3 C4 55.4 53.5
C1 C2 C3 H3 297.3 294.0
O5 C1 H1 O1 238.9 240.1
O5 C1 H1 C2 118.4 120.3
O1 C1 H1 C2 239.6 240.2
H1 C1 O1 HO1 58.8 300.1
H1 C1 C2 O2 300.9 298.8
H1 C1 C2 C3 62.5 58.9
H1 C1 C2 H2 180.9 178.7
HO1 O1 C1 C2 298.0 180.3
HO1 O1 C1 H1 58.8 300.1
O2 C2 C1 H1 300.9 298.8
C1 C2 O2 C3 121.7 119.8
C1 C2 O2 H2 240.0 239.8
C3 C2 O2 H2 118.3 120.1
O2 C2 C3 O3 302.0 293.7
O2 C2 C3 C4 178.7 173.5
O2 C2 C3 H3 60.6 54.0
C5 C4 C3 C2 303.3 306.5
C3 C2 C1 H1 62.5 58.9
C1 C2 C3 O2 236.6 240.0
C1 C2 C3 H2 118.3 119.8
O2 C2 C3 H2 241.7 239.8
C3 C2 O2 HO2 58.3 180.3
O3 C3 C2 C4 123.3 120.2
O3 C3 C2 H3 241.3 239.7
C2 C3 O3 HO3 57.8 180.0
C4 C3 C2 H3 118.1 119.5
C2 C3 C4 O4 180.9 186.5
C2 C3 C4 H4 62.3 66.4
H2 C2 C1 H1 180.9 178.7
C1 C2 H2 O2 122.3 120.2
C1 C2 H2 C3 241.1 240.4
O2 C2 H2 C3 118.8 120.2
H2 C2 O2 HO2 300.0 60.2
H2 C2 C3 O3 60.3 53.8
H2 C2 C3 C4 297.0 293.7
H2 C2 C3 H3 179.0 174.1
HO2 O2 C2 C3 58.3 180.3
HO2 O2 C2 H2 300.0 60.2
C5 C4 C3 O3 180.5 186.5
O3 C3 C2 H2 60.3 53.8
C2 C3 O3 C4 237.8 240.6
C2 C3 O3 H3 118.7 120.3
C4 C3 O3 H3 240.9 239.7
O3 C3 C4 O4 58.1 66.5
O3 C3 C4 H4 299.5 306.4
C3 C4 C5 H51 186.2 181.3
C3 C4 C5 H52 295.6 301.0
C5 C4 C3 O4 122.3 120.0
C5 C4 C3 H4 241.0 240.1
C4 C3 C2 H2 297.0 293.7
C2 C3 C4 O3 122.8 120.0
C2 C3 C4 H3 241.9 240.4
O3 C3 C4 H3 119.1 120.4
C4 C3 O3 HO3 180.0 299.4
O4 C4 C3 H4 118.6 120.1
C3 C4 O4 HO4 301.7 179.8
H3 C3 C2 H2 179.0 174.1
C2 C3 H3 O3 239.9 239.7
C2 C3 H3 C4 118.9 119.1
O3 C3 H3 C4 238.9 239.4
H3 C3 O3 HO3 299.1 59.7
H3 C3 C4 O4 299.0 306.1
H3 C3 C4 H4 180.4 186.0
HO3 O3 C3 C4 180.0 299.4
HO3 O3 C3 H3 299.1 59.7
O4 C4 C5 H51 307.5 301.3
O4 C4 C5 H52 57.0 61.0
C5 C4 O4 C3 238.3 240.3
C5 C4 O4 H4 119.7 120.2
O4 C4 C3 H3 299.0 306.1
C3 C4 O4 H4 241.4 239.9
H4 C4 C5 H51 67.1 61.5
H4 C4 C5 H52 176.6 181.2
C5 C4 H4 C3 119.9 119.6
C5 C4 H4 O4 238.9 239.8
H4 C4 C3 H3 180.4 186.0
C3 C4 H4 O4 119.0 120.2
H4 C4 O4 HO4 60.4 299.9
HO4 O4 C4 H4 60.4 299.9