PDB Chemical Component LX1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LX1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O8	P	1.530	1.609
O8	HO8	0.950	0.967
P	O6	1.491	1.480
P	O7	1.526	1.610
P	O5	1.634	1.609
O7	HO7	0.951	0.966
O5	C5	1.409	1.429
C5	C4	1.543	1.528
C5	H51	1.115	1.089
C5	H52	1.115	1.090
C4	O4	1.440	1.429
C4	C3	1.528	1.529
C4	H4	1.115	1.090
O4	HO4	0.949	0.967
C3	O3	1.446	1.428
C3	C2	1.553	1.529
C3	H3	1.116	1.090
O3	HO3	0.950	0.968
C2	O2	1.436	1.429
C2	C1	1.511	1.529
C2	H2	1.115	1.091
O2	HO2	0.949	0.967
C1	H11	1.115	1.089
C1	H12	1.116	1.091
C1	H13	1.115	1.089

Bond Angles for LX1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
P	O8	HO8	114.7	106.9
O8	P	O6	114.7	109.4
O8	P	O7	109.6	109.5
O8	P	O5	108.1	109.6
O6	P	O7	112.9	109.4
O6	P	O5	105.1	109.5
O7	P	O5	105.7	109.5
P	O7	HO7	109.6	106.8
P	O5	C5	123.4	106.9
O5	C5	C4	113.5	109.5
O5	C5	H51	110.7	109.5
O5	C5	H52	110.7	109.4
C4	C5	H51	110.8	109.5
C4	C5	H52	110.8	109.5
C5	C4	O4	108.4	109.5
C5	C4	C3	109.4	109.5
C5	C4	H4	112.5	109.5
H51	C5	H52	99.5	109.4
O4	C4	C3	115.4	109.5
O4	C4	H4	106.1	109.4
C4	O4	HO4	108.4	106.8
C3	C4	H4	105.0	109.5
C4	C3	O3	110.4	109.5
C4	C3	C2	108.8	109.6
C4	C3	H3	109.6	109.4
O3	C3	C2	110.4	109.5
O3	C3	H3	108.0	109.4
C3	O3	HO3	110.4	106.8
C2	C3	H3	109.6	109.5
C3	C2	O2	108.8	109.5
C3	C2	C1	109.9	109.6
C3	C2	H2	110.0	109.5
O2	C2	C1	110.7	109.5
O2	C2	H2	109.3	109.4
C2	O2	HO2	108.8	106.8
C1	C2	H2	108.1	109.5
C2	C1	H11	109.9	109.5
C2	C1	H12	112.0	109.4
C2	C1	H13	112.0	109.5
H11	C1	H12	112.1	109.5
H11	C1	H13	112.1	109.5
H12	C1	H13	98.4	109.5

Torsion Angles for LX1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O6	P	O8	O7	231.7	240.1
O6	P	O8	O5	116.9	120.0
O7	P	O8	O5	245.2	239.9
O8	P	O7	HO7	180.1	60.0
O8	P	O5	C5	297.6	180.0
HO8	O8	P	O6	180.1	300.0
HO8	O8	P	O7	308.3	59.9
HO8	O8	P	O5	63.2	180.0
O6	P	O8	HO8	180.1	300.0
O8	P	O6	O7	126.6	119.9
O8	P	O6	O5	241.4	239.9
O7	P	O6	O5	114.8	120.0
O6	P	O7	HO7	309.3	179.9
O6	P	O5	C5	174.6	60.1
O7	P	O8	HO8	308.3	59.9
O8	P	O7	O6	230.7	240.1
O8	P	O7	O5	116.4	120.1
O6	P	O7	O5	245.6	240.0
O7	P	O5	C5	55.0	300.1
O5	P	O8	HO8	63.2	180.0
O8	P	O5	O6	123.0	120.0
O8	P	O5	O7	242.6	239.9
O6	P	O5	O7	119.7	120.0
O5	P	O7	HO7	63.7	299.9
P	O5	C5	C4	96.7	180.0
P	O5	C5	H51	221.9	59.9
P	O5	C5	H52	331.3	300.0
HO7	O7	P	O5	63.7	299.9
C4	C5	O5	H51	234.7	120.1
C4	C5	O5	H52	125.3	240.0
O5	C5	C4	O4	182.6	300.0
O5	C5	C4	C3	56.0	180.0
O5	C5	C4	H4	299.6	59.9
H51	C5	O5	H52	250.6	119.9
O5	C5	C4	H51	125.3	239.9
O5	C5	C4	H52	234.7	119.9
H51	C5	C4	H52	109.5	240.1
O4	C4	C5	C3	126.7	120.0
O4	C4	C5	H4	243.0	240.1
C5	C4	O4	HO4	180.0	300.0
C3	C4	C5	H4	116.3	120.1
C5	C4	C3	O3	59.7	59.9
C5	C4	C3	C2	181.0	180.0
C5	C4	C3	H3	300.8	300.0
O5	C5	H51	C4	233.2	120.1
O5	C5	H51	H52	116.6	240.1
C4	C5	H51	H52	243.3	120.0
H51	C5	C4	O4	57.4	60.1
H51	C5	C4	C3	290.7	300.1
H51	C5	C4	H4	174.4	180.0
O5	C5	H52	C4	126.8	240.0
O5	C5	H52	H51	243.4	120.0
C4	C5	H52	H51	116.6	240.0
H52	C5	C4	O4	307.9	180.0
H52	C5	C4	C3	181.3	60.0
H52	C5	C4	H4	64.9	300.0
O4	C4	C5	H51	57.4	60.1
O4	C4	C5	H52	307.9	180.0
C5	C4	O4	C3	236.9	239.9
C5	C4	O4	H4	121.0	120.0
C3	C4	O4	H4	244.1	240.0
O4	C4	C3	O3	297.1	299.9
O4	C4	C3	C2	58.5	59.9
O4	C4	C3	H3	178.3	180.0
C3	C4	C5	H51	290.7	300.1
C3	C4	C5	H52	181.3	60.0
C5	C4	C3	O4	122.6	120.0
C5	C4	C3	H4	239.1	239.9
O4	C4	C3	H4	116.5	119.9
C3	C4	O4	HO4	303.1	60.1
O3	C3	C4	C2	238.7	239.9
O3	C3	C4	H3	118.9	119.9
C4	C3	O3	HO3	180.1	60.1
C2	C3	C4	H3	240.2	240.0
C4	C3	C2	O2	270.3	300.0
C4	C3	C2	C1	148.9	180.0
C4	C3	C2	H2	30.0	60.0
H4	C4	C5	H51	174.4	180.0
H4	C4	C5	H52	64.9	300.0
C5	C4	H4	O4	241.6	240.0
C5	C4	H4	C3	118.9	120.1
O4	C4	H4	C3	237.3	240.1
H4	C4	O4	HO4	59.0	180.0
H4	C4	C3	O3	180.7	180.0
H4	C4	C3	C2	302.0	300.0
H4	C4	C3	H3	61.8	60.1
HO4	O4	C4	C3	303.1	60.1
HO4	O4	C4	H4	59.0	180.0
O3	C3	C4	H4	180.7	180.0
C4	C3	O3	C2	120.4	120.1
C4	C3	O3	H3	240.2	240.1
C2	C3	O3	H3	119.8	120.0
O3	C3	C2	O2	31.6	60.1
O3	C3	C2	C1	270.2	300.0
O3	C3	C2	H2	151.3	180.0
C2	C3	C4	H4	302.0	300.0
C4	C3	C2	O3	238.7	240.0
C4	C3	C2	H3	119.8	120.0
O3	C3	C2	H3	241.1	240.0
C2	C3	O3	HO3	59.7	299.9
O2	C2	C3	C1	121.3	120.0
O2	C2	C3	H2	240.3	240.1
C3	C2	O2	HO2	180.0	300.0
C1	C2	C3	H2	119.0	120.0
C3	C2	C1	H11	180.0	180.1
C3	C2	C1	H12	305.3	300.0
C3	C2	C1	H13	54.7	59.9
H3	C3	C4	H4	61.8	60.1
C4	C3	H3	O3	120.3	119.9
C4	C3	H3	C2	240.6	239.9
O3	C3	H3	C2	120.3	120.0
H3	C3	O3	HO3	299.9	179.9
H3	C3	C2	O2	150.4	180.0
H3	C3	C2	C1	29.1	60.0
H3	C3	C2	H2	270.1	300.0
HO3	O3	C3	C2	59.7	299.9
HO3	O3	C3	H3	299.9	179.9
O2	C2	C3	H3	150.4	180.0
C3	C2	O2	C1	239.1	239.9
C3	C2	O2	H2	120.1	119.9
C1	C2	O2	H2	241.0	240.1
O2	C2	C1	H11	59.8	60.0
O2	C2	C1	H12	185.1	179.9
O2	C2	C1	H13	294.5	299.9
C1	C2	C3	H3	29.1	60.0
C3	C2	C1	O2	120.2	120.1
C3	C2	C1	H2	239.9	240.0
O2	C2	C1	H2	119.7	119.9
C1	C2	O2	HO2	300.9	60.1
H11	C1	C2	H12	234.7	240.0
H11	C1	C2	H13	125.3	120.1
H12	C1	C2	H13	250.6	240.1
H2	C2	C3	H3	270.1	300.0
C3	C2	H2	O2	240.6	240.0
C3	C2	H2	C1	120.0	120.1
O2	C2	H2	C1	239.4	240.1
H2	C2	O2	HO2	59.9	180.0
H2	C2	C1	H11	300.1	300.1
H2	C2	C1	H12	65.3	60.0
H2	C2	C1	H13	174.8	180.0
HO2	O2	C2	C1	300.9	60.1
HO2	O2	C2	H2	59.9	180.0
H11	C1	C2	H2	300.1	300.1
C2	C1	H11	H12	125.2	119.9
C2	C1	H11	H13	234.7	239.9
H12	C1	H11	H13	109.5	120.0
H12	C1	C2	H2	65.3	60.0
C2	C1	H12	H11	236.0	240.0
C2	C1	H12	H13	117.9	120.0
H11	C1	H12	H13	241.9	239.9
H13	C1	C2	H2	174.8	180.0
C2	C1	H13	H11	124.1	120.1
C2	C1	H13	H12	242.1	240.1
H11	C1	H13	H12	118.0	120.0