PDB Chemical Component LSG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LSG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.400 |
1.383 |
| C6 |
C1 |
1.401 |
1.384 |
| C1 |
H1 |
1.080 |
1.079 |
| C3 |
C2 |
1.396 |
1.384 |
| C2 |
I8 |
2.111 |
2.095 |
| C4 |
C3 |
1.395 |
1.381 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
C5 |
1.398 |
1.389 |
| C4 |
H4 |
1.080 |
1.080 |
| N9 |
C5 |
1.361 |
1.400 |
| C5 |
C6 |
1.391 |
1.391 |
| C6 |
F7 |
1.343 |
1.351 |
| C10 |
N9 |
1.363 |
1.373 |
| N9 |
HN9 |
1.000 |
0.970 |
| C14 |
C10 |
1.479 |
1.398 |
| N11 |
C10 |
1.338 |
1.349 |
| C12 |
N11 |
1.360 |
1.387 |
| N11 |
C22 |
1.489 |
1.465 |
| C23 |
C12 |
1.497 |
1.409 |
| C13 |
C12 |
1.410 |
1.379 |
| C13 |
C14 |
1.381 |
1.408 |
| C13 |
H13 |
1.080 |
1.081 |
| C14 |
C15 |
1.493 |
1.469 |
| N17 |
C15 |
1.326 |
1.347 |
| C15 |
O16 |
1.214 |
1.217 |
| N17 |
O18 |
1.450 |
1.416 |
| N17 |
HN17 |
0.999 |
0.971 |
| C19 |
O18 |
1.432 |
1.429 |
| C19 |
C20 |
1.528 |
1.531 |
| C19 |
H19 |
1.100 |
1.090 |
| C19 |
H19A |
1.100 |
1.089 |
| O21 |
C20 |
1.440 |
1.429 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.090 |
| O21 |
HO21 |
0.950 |
0.967 |
| C22 |
H22 |
1.100 |
1.089 |
| C22 |
H22A |
1.100 |
1.090 |
| C22 |
H22B |
1.100 |
1.090 |
| C25 |
C23 |
1.495 |
1.507 |
| C23 |
O24 |
1.224 |
1.214 |
| C25 |
H25 |
1.100 |
1.091 |
| C25 |
H25A |
1.100 |
1.090 |
| C25 |
H25B |
1.101 |
1.089 |
Bond Angles for LSG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
H1 |
120.2 |
120.0 |
| C6 |
C1 |
H1 |
120.2 |
120.0 |
| C3 |
C2 |
I8 |
119.5 |
119.9 |
| C4 |
C3 |
H3 |
119.9 |
119.9 |
| C5 |
C4 |
H4 |
119.5 |
120.1 |
| C4 |
C5 |
C6 |
118.4 |
119.9 |
| C5 |
C6 |
F7 |
118.0 |
120.1 |
| C10 |
N9 |
HN9 |
116.5 |
120.0 |
| C12 |
N11 |
C22 |
126.9 |
125.5 |
| N11 |
C22 |
H22 |
109.5 |
109.5 |
| N11 |
C22 |
H22A |
109.5 |
109.4 |
| N11 |
C22 |
H22B |
109.4 |
109.5 |
| C14 |
C13 |
H13 |
126.3 |
126.4 |
| C13 |
C14 |
C15 |
134.3 |
126.4 |
| C14 |
C15 |
O16 |
118.8 |
120.0 |
| O18 |
N17 |
HN17 |
120.3 |
120.0 |
| C20 |
C19 |
H19 |
109.0 |
109.5 |
| C20 |
C19 |
H19A |
109.0 |
109.4 |
| C19 |
C20 |
H20 |
109.9 |
109.4 |
| C19 |
C20 |
H20A |
109.9 |
109.5 |
| H19 |
C19 |
H19A |
109.9 |
109.5 |
| O21 |
C20 |
H20 |
109.9 |
109.5 |
| O21 |
C20 |
H20A |
109.9 |
109.4 |
| H20 |
C20 |
H20A |
109.0 |
109.5 |
| H22 |
C22 |
H22A |
109.5 |
109.5 |
| H22 |
C22 |
H22B |
109.5 |
109.5 |
| H22A |
C22 |
H22B |
109.5 |
109.4 |
| H25 |
C25 |
H25A |
109.5 |
109.4 |
| H25 |
C25 |
H25B |
109.5 |
109.5 |
| H25A |
C25 |
H25B |
109.5 |
109.5 |
Torsion Angles for LSG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C3 |
C2 |
C1 |
H1 |
179.5 |
180.0 |
| I8 |
C2 |
C1 |
H1 |
0.2 |
360.0 |
| C4 |
C3 |
C2 |
I8 |
179.9 |
180.0 |
| H3 |
C3 |
C2 |
I8 |
359.9 |
0.1 |
| C5 |
C4 |
C3 |
H3 |
179.5 |
179.9 |
| C4 |
C5 |
C6 |
F7 |
179.8 |
180.0 |
| H4 |
C4 |
C3 |
H3 |
359.5 |
359.9 |
| H4 |
C4 |
C5 |
C6 |
180.3 |
179.8 |
| N9 |
C5 |
C4 |
H4 |
1.3 |
0.0 |
| C5 |
C6 |
C1 |
H1 |
180.4 |
179.7 |
| C6 |
C5 |
C4 |
H4 |
180.3 |
179.8 |
| F7 |
C6 |
C1 |
H1 |
0.3 |
0.3 |
| C14 |
C10 |
N9 |
HN9 |
49.4 |
291.4 |
| N11 |
C10 |
N9 |
HN9 |
231.0 |
111.7 |
| C12 |
N11 |
C22 |
H22 |
358.2 |
270.0 |
| C12 |
N11 |
C22 |
H22A |
118.2 |
30.0 |
| C12 |
N11 |
C22 |
H22B |
238.2 |
149.9 |
| H22 |
C22 |
N11 |
H22A |
240.0 |
240.0 |
| H22 |
C22 |
N11 |
H22B |
120.0 |
120.1 |
| H22A |
C22 |
N11 |
H22B |
240.0 |
240.1 |
| C13 |
C12 |
N11 |
C22 |
180.6 |
180.0 |
| C13 |
C14 |
C15 |
O16 |
176.9 |
180.0 |
| H13 |
C13 |
C14 |
C15 |
1.1 |
359.8 |
| C15 |
C14 |
C13 |
H13 |
1.1 |
359.8 |
| C19 |
O18 |
N17 |
HN17 |
18.8 |
360.0 |
| H19 |
C19 |
C20 |
H19A |
120.0 |
120.1 |
| O21 |
C20 |
C19 |
H20 |
240.0 |
240.0 |
| O21 |
C20 |
C19 |
H20A |
120.0 |
120.0 |
| H20 |
C20 |
C19 |
H20A |
240.0 |
239.9 |
| C20 |
C19 |
H19 |
H19A |
240.6 |
240.0 |
| H19 |
C19 |
C20 |
H20 |
170.4 |
65.0 |
| H19 |
C19 |
C20 |
H20A |
290.4 |
185.1 |
| C20 |
C19 |
H19A |
H19 |
119.4 |
120.0 |
| H19A |
C19 |
C20 |
H20 |
50.4 |
304.9 |
| H19A |
C19 |
C20 |
H20A |
170.4 |
65.0 |
| O21 |
C20 |
C19 |
H19 |
50.4 |
305.0 |
| O21 |
C20 |
C19 |
H19A |
290.4 |
185.0 |
| C19 |
C20 |
O21 |
H20 |
120.0 |
119.9 |
| C19 |
C20 |
O21 |
H20A |
240.0 |
240.0 |
| H20 |
C20 |
O21 |
H20A |
120.0 |
120.1 |
| H20 |
C20 |
C19 |
H19 |
170.4 |
65.0 |
| H20 |
C20 |
C19 |
H19A |
50.4 |
304.9 |
| C19 |
C20 |
H20 |
H20A |
120.5 |
120.0 |
| O21 |
C20 |
H20 |
H20A |
239.5 |
240.0 |
| H20A |
C20 |
C19 |
H19 |
290.4 |
185.1 |
| H20A |
C20 |
C19 |
H19A |
170.4 |
65.0 |
| C19 |
C20 |
H20A |
H20 |
239.5 |
240.0 |
| O21 |
C20 |
H20A |
H20 |
120.5 |
120.0 |
| HO21 |
O21 |
C20 |
H20 |
60.0 |
60.0 |
| HO21 |
O21 |
C20 |
H20A |
300.0 |
299.9 |
| N11 |
C22 |
H22 |
H22A |
120.0 |
120.0 |
| N11 |
C22 |
H22 |
H22B |
240.0 |
240.0 |
| H22A |
C22 |
H22 |
H22B |
120.0 |
120.0 |
| N11 |
C22 |
H22A |
H22 |
240.0 |
240.0 |
| N11 |
C22 |
H22A |
H22B |
120.0 |
119.9 |
| H22 |
C22 |
H22A |
H22B |
240.0 |
240.0 |
| N11 |
C22 |
H22B |
H22 |
120.0 |
120.1 |
| N11 |
C22 |
H22B |
H22A |
240.0 |
240.1 |
| H22 |
C22 |
H22B |
H22A |
120.0 |
120.0 |
| H25A |
C25 |
H25 |
H25B |
120.0 |
120.0 |
| H25 |
C25 |
H25A |
H25B |
240.0 |
240.0 |
| H25 |
C25 |
H25B |
H25A |
120.0 |
120.0 |