PDB Chemical Component LS4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LS4
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O5 |
C6 |
1.233 |
1.219 |
C6 |
N7 |
1.356 |
1.344 |
C6 |
C14 |
1.520 |
1.468 |
N7 |
C8 |
1.375 |
1.389 |
N7 |
H71 |
1.020 |
0.970 |
C8 |
C9 |
1.477 |
1.391 |
C8 |
C13 |
1.461 |
1.399 |
C9 |
C10 |
1.491 |
1.379 |
C9 |
H91 |
1.103 |
1.079 |
C10 |
C11 |
1.490 |
1.386 |
C10 |
H101 |
1.103 |
1.079 |
C11 |
C12 |
1.491 |
1.380 |
C11 |
H111 |
1.103 |
1.080 |
C12 |
C13 |
1.495 |
1.390 |
C12 |
H121 |
1.103 |
1.081 |
C13 |
C14 |
1.443 |
1.481 |
C14 |
C15 |
1.344 |
1.365 |
C15 |
N16 |
1.484 |
1.361 |
C15 |
H151 |
1.103 |
1.079 |
N16 |
C17 |
1.351 |
1.398 |
N16 |
H16N |
1.020 |
0.970 |
C17 |
C18 |
1.509 |
1.389 |
C17 |
C22 |
1.478 |
1.388 |
C18 |
C19 |
1.451 |
1.380 |
C18 |
H181 |
1.103 |
1.080 |
C19 |
C20 |
1.482 |
1.382 |
C19 |
H191 |
1.103 |
1.080 |
C20 |
C21 |
1.480 |
1.383 |
C20 |
S23 |
1.773 |
1.762 |
C21 |
C22 |
1.474 |
1.381 |
C21 |
H211 |
1.103 |
1.080 |
C22 |
H221 |
1.103 |
1.079 |
S23 |
O24 |
1.435 |
1.421 |
S23 |
O25 |
1.428 |
1.421 |
S23 |
N26 |
1.674 |
1.656 |
N26 |
C27 |
1.504 |
1.385 |
N26 |
H26N |
1.020 |
0.970 |
C27 |
S28 |
1.700 |
1.736 |
C27 |
N31 |
1.367 |
1.319 |
S28 |
C29 |
1.696 |
1.787 |
C29 |
C30 |
1.405 |
1.353 |
C29 |
H291 |
1.103 |
1.080 |
C30 |
N31 |
1.376 |
1.320 |
C30 |
H301 |
1.103 |
1.079 |
Bond Angles for LS4
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O5 |
C6 |
N7 |
127.4 |
126.0 |
O5 |
C6 |
C14 |
123.4 |
125.9 |
N7 |
C6 |
C14 |
109.2 |
108.0 |
C6 |
N7 |
C8 |
109.9 |
111.4 |
C6 |
N7 |
H71 |
124.5 |
124.3 |
C6 |
C14 |
C13 |
104.2 |
105.0 |
C6 |
C14 |
C15 |
126.1 |
127.5 |
C8 |
N7 |
H71 |
125.6 |
124.3 |
N7 |
C8 |
C9 |
129.5 |
131.7 |
N7 |
C8 |
C13 |
110.0 |
109.2 |
C9 |
C8 |
C13 |
120.5 |
119.2 |
C8 |
C9 |
C10 |
119.2 |
120.1 |
C8 |
C9 |
H91 |
120.0 |
120.0 |
C8 |
C13 |
C12 |
121.5 |
120.3 |
C8 |
C13 |
C14 |
106.6 |
106.4 |
C10 |
C9 |
H91 |
120.9 |
119.9 |
C9 |
C10 |
C11 |
120.5 |
120.6 |
C9 |
C10 |
H101 |
119.8 |
119.7 |
C11 |
C10 |
H101 |
119.7 |
119.7 |
C10 |
C11 |
C12 |
120.0 |
120.0 |
C10 |
C11 |
H111 |
120.0 |
120.0 |
C12 |
C11 |
H111 |
120.0 |
120.0 |
C11 |
C12 |
C13 |
118.3 |
119.8 |
C11 |
C12 |
H121 |
120.7 |
120.1 |
C13 |
C12 |
H121 |
121.0 |
120.1 |
C12 |
C13 |
C14 |
131.9 |
133.3 |
C13 |
C14 |
C15 |
129.7 |
127.5 |
C14 |
C15 |
N16 |
124.1 |
120.0 |
C14 |
C15 |
H151 |
112.6 |
120.0 |
N16 |
C15 |
H151 |
123.3 |
120.0 |
C15 |
N16 |
C17 |
126.2 |
120.0 |
C15 |
N16 |
H16N |
106.3 |
120.0 |
C17 |
N16 |
H16N |
106.3 |
120.0 |
N16 |
C17 |
C18 |
125.2 |
120.0 |
N16 |
C17 |
C22 |
114.9 |
120.0 |
C18 |
C17 |
C22 |
119.9 |
119.9 |
C17 |
C18 |
C19 |
120.1 |
119.9 |
C17 |
C18 |
H181 |
121.9 |
120.1 |
C17 |
C22 |
C21 |
119.8 |
119.8 |
C17 |
C22 |
H221 |
120.3 |
120.1 |
C19 |
C18 |
H181 |
118.0 |
120.1 |
C18 |
C19 |
C20 |
119.5 |
120.1 |
C18 |
C19 |
H191 |
119.2 |
120.0 |
C20 |
C19 |
H191 |
121.3 |
119.9 |
C19 |
C20 |
C21 |
121.1 |
120.1 |
C19 |
C20 |
S23 |
117.9 |
120.0 |
C21 |
C20 |
S23 |
120.9 |
119.9 |
C20 |
C21 |
C22 |
119.6 |
120.1 |
C20 |
C21 |
H211 |
120.4 |
119.9 |
C20 |
S23 |
O24 |
111.1 |
105.8 |
C20 |
S23 |
O25 |
105.0 |
105.8 |
C20 |
S23 |
N26 |
107.2 |
107.4 |
C22 |
C21 |
H211 |
120.0 |
120.0 |
C21 |
C22 |
H221 |
120.0 |
120.1 |
O24 |
S23 |
O25 |
117.6 |
125.4 |
O24 |
S23 |
N26 |
106.9 |
105.7 |
O25 |
S23 |
N26 |
108.6 |
105.8 |
S23 |
N26 |
C27 |
123.5 |
120.0 |
S23 |
N26 |
H26N |
107.2 |
120.0 |
C27 |
N26 |
H26N |
107.2 |
120.0 |
N26 |
C27 |
S28 |
123.1 |
128.9 |
N26 |
C27 |
N31 |
127.0 |
129.0 |
S28 |
C27 |
N31 |
109.9 |
102.1 |
C27 |
S28 |
C29 |
93.4 |
97.5 |
C27 |
N31 |
C30 |
114.6 |
121.2 |
S28 |
C29 |
C30 |
109.9 |
100.7 |
S28 |
C29 |
H291 |
132.7 |
129.7 |
C30 |
C29 |
H291 |
117.5 |
129.6 |
C29 |
C30 |
N31 |
111.9 |
118.5 |
C29 |
C30 |
H301 |
125.0 |
120.8 |
N31 |
C30 |
H301 |
123.1 |
120.8 |
Torsion Angles for LS4
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N7 |
C6 |
O5 |
C14 |
178.0 |
180.4 |
O5 |
C6 |
N7 |
C8 |
181.1 |
180.0 |
O5 |
C6 |
N7 |
H71 |
1.1 |
360.0 |
O5 |
C6 |
C14 |
C13 |
180.6 |
179.9 |
O5 |
C6 |
C14 |
C15 |
1.7 |
0.1 |
O5 |
C6 |
N7 |
C14 |
181.8 |
179.7 |
N7 |
C6 |
C14 |
C13 |
2.3 |
359.6 |
N7 |
C6 |
C14 |
C15 |
183.3 |
179.8 |
C8 |
N7 |
C6 |
H71 |
180.0 |
180.0 |
C6 |
N7 |
C8 |
C9 |
180.1 |
180.0 |
C6 |
N7 |
C8 |
C13 |
358.8 |
0.0 |
O5 |
C6 |
C14 |
N7 |
178.3 |
180.3 |
C14 |
C6 |
N7 |
C8 |
359.3 |
0.3 |
C14 |
C6 |
N7 |
H71 |
179.3 |
180.3 |
C8 |
C13 |
C14 |
C6 |
357.1 |
0.4 |
C12 |
C13 |
C14 |
C6 |
176.6 |
180.2 |
C13 |
C14 |
C6 |
C15 |
179.0 |
179.8 |
C6 |
C14 |
C15 |
N16 |
10.2 |
359.7 |
C6 |
C14 |
C15 |
H151 |
190.2 |
179.8 |
C8 |
N7 |
C6 |
C14 |
359.3 |
0.3 |
C6 |
N7 |
C8 |
H71 |
180.0 |
180.0 |
C9 |
C8 |
N7 |
C13 |
181.3 |
179.9 |
N7 |
C8 |
C9 |
C10 |
176.0 |
180.1 |
N7 |
C8 |
C9 |
H91 |
356.1 |
0.1 |
N7 |
C8 |
C13 |
C12 |
183.1 |
179.9 |
N7 |
C8 |
C13 |
C14 |
2.7 |
359.7 |
H71 |
N7 |
C6 |
C14 |
179.3 |
180.3 |
C6 |
N7 |
H71 |
C8 |
180.0 |
180.0 |
H71 |
N7 |
C8 |
C9 |
0.1 |
359.9 |
H71 |
N7 |
C8 |
C13 |
178.7 |
180.0 |
C9 |
C8 |
N7 |
H71 |
0.1 |
359.9 |
N7 |
C8 |
C9 |
C13 |
178.5 |
180.1 |
C9 |
C8 |
C13 |
C12 |
1.9 |
0.0 |
C9 |
C8 |
C13 |
C14 |
181.5 |
179.8 |
C10 |
C9 |
C8 |
H91 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
C11 |
1.2 |
0.0 |
C8 |
C9 |
C10 |
H101 |
181.2 |
180.0 |
C6 |
C14 |
C13 |
C8 |
357.1 |
0.4 |
C13 |
C8 |
N7 |
H71 |
178.7 |
180.0 |
N7 |
C8 |
C13 |
C9 |
181.2 |
179.9 |
C13 |
C8 |
C9 |
C10 |
357.5 |
360.0 |
C13 |
C8 |
C9 |
H91 |
177.5 |
180.0 |
C11 |
C12 |
C13 |
C8 |
360.0 |
0.0 |
C8 |
C13 |
C12 |
H121 |
180.0 |
180.1 |
C12 |
C13 |
C8 |
C14 |
180.4 |
180.2 |
C8 |
C13 |
C14 |
C15 |
176.0 |
180.2 |
C10 |
C9 |
C8 |
C13 |
357.5 |
360.0 |
C8 |
C9 |
C10 |
H91 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
H101 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
C12 |
0.6 |
0.0 |
C9 |
C10 |
C11 |
H111 |
180.6 |
180.0 |
H91 |
C9 |
C8 |
C13 |
177.5 |
180.0 |
C8 |
C9 |
H91 |
C10 |
180.0 |
180.0 |
H91 |
C9 |
C10 |
C11 |
181.2 |
180.0 |
H91 |
C9 |
C10 |
H101 |
1.2 |
0.0 |
C11 |
C10 |
C9 |
H91 |
181.2 |
180.0 |
C9 |
C10 |
C11 |
H101 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
H111 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
C13 |
358.8 |
359.9 |
C10 |
C11 |
C12 |
H121 |
178.8 |
179.9 |
H101 |
C10 |
C9 |
H91 |
1.2 |
0.0 |
C9 |
C10 |
H101 |
C11 |
180.0 |
180.0 |
H101 |
C10 |
C11 |
C12 |
180.6 |
180.0 |
H101 |
C10 |
C11 |
H111 |
0.6 |
360.0 |
C8 |
C13 |
C12 |
C11 |
360.0 |
0.0 |
C12 |
C11 |
C10 |
H101 |
180.6 |
180.0 |
C10 |
C11 |
C12 |
H111 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H121 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
C14 |
180.5 |
180.3 |
H111 |
C11 |
C10 |
H101 |
0.6 |
360.0 |
C10 |
C11 |
H111 |
C12 |
180.0 |
180.0 |
H111 |
C11 |
C12 |
C13 |
178.8 |
180.0 |
H111 |
C11 |
C12 |
H121 |
358.8 |
359.9 |
C6 |
C14 |
C13 |
C12 |
176.6 |
180.2 |
C8 |
C13 |
C12 |
C14 |
179.5 |
179.7 |
C13 |
C12 |
C11 |
H111 |
178.8 |
180.0 |
C11 |
C12 |
C13 |
H121 |
180.0 |
180.0 |
C12 |
C13 |
C14 |
C15 |
355.6 |
360.0 |
H121 |
C12 |
C11 |
H111 |
358.8 |
359.9 |
C11 |
C12 |
H121 |
C13 |
180.0 |
180.0 |
H121 |
C12 |
C13 |
C14 |
0.5 |
0.4 |
C6 |
C14 |
C13 |
C15 |
181.1 |
180.2 |
C8 |
C13 |
C14 |
C12 |
180.5 |
180.3 |
C14 |
C13 |
C12 |
H121 |
0.5 |
0.4 |
C13 |
C14 |
C15 |
N16 |
191.5 |
180.0 |
C13 |
C14 |
C15 |
H151 |
11.5 |
0.1 |
C6 |
C14 |
C15 |
C13 |
178.7 |
179.8 |
N16 |
C15 |
C14 |
H151 |
180.0 |
179.9 |
C14 |
C15 |
N16 |
C17 |
164.2 |
180.0 |
C14 |
C15 |
N16 |
H16N |
39.0 |
0.1 |
C14 |
C15 |
N16 |
H151 |
180.0 |
180.1 |
C17 |
N16 |
C15 |
H16N |
125.3 |
179.9 |
C15 |
N16 |
C17 |
C18 |
334.5 |
180.0 |
C15 |
N16 |
C17 |
C22 |
154.3 |
359.8 |
C14 |
C15 |
H151 |
N16 |
180.0 |
179.9 |
H151 |
C15 |
N16 |
C17 |
344.2 |
360.0 |
H151 |
C15 |
N16 |
H16N |
218.9 |
180.0 |
C17 |
N16 |
C15 |
H151 |
344.2 |
360.0 |
C15 |
N16 |
C17 |
H16N |
234.8 |
180.1 |
C18 |
C17 |
N16 |
C22 |
180.1 |
180.3 |
N16 |
C17 |
C18 |
C19 |
179.0 |
180.0 |
N16 |
C17 |
C18 |
H181 |
359.0 |
0.1 |
N16 |
C17 |
C22 |
C21 |
179.9 |
179.7 |
N16 |
C17 |
C22 |
H221 |
359.9 |
0.3 |
H16N |
N16 |
C15 |
H151 |
218.9 |
180.0 |
C15 |
N16 |
H16N |
C17 |
136.6 |
179.9 |
H16N |
N16 |
C17 |
C18 |
99.7 |
360.0 |
H16N |
N16 |
C17 |
C22 |
279.6 |
179.7 |
C18 |
C17 |
N16 |
H16N |
99.7 |
360.0 |
N16 |
C17 |
C18 |
C22 |
179.8 |
179.7 |
C18 |
C17 |
C22 |
C21 |
359.7 |
359.5 |
C18 |
C17 |
C22 |
H221 |
179.8 |
180.0 |
C19 |
C18 |
C17 |
H181 |
180.0 |
179.9 |
C17 |
C18 |
C19 |
C20 |
2.5 |
360.0 |
C17 |
C18 |
C19 |
H191 |
182.5 |
180.0 |
C22 |
C17 |
N16 |
H16N |
279.6 |
179.7 |
N16 |
C17 |
C22 |
C18 |
180.1 |
180.3 |
C22 |
C17 |
C18 |
C19 |
359.1 |
0.2 |
C22 |
C17 |
C18 |
H181 |
179.1 |
180.3 |
C20 |
C21 |
C22 |
C17 |
359.7 |
0.6 |
C17 |
C22 |
C21 |
H211 |
179.7 |
180.3 |
C21 |
C22 |
C17 |
H221 |
180.0 |
179.5 |
C19 |
C18 |
C17 |
C22 |
359.1 |
0.2 |
C17 |
C18 |
C19 |
H181 |
180.0 |
180.1 |
C20 |
C19 |
C18 |
H191 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
C21 |
356.9 |
0.0 |
C18 |
C19 |
C20 |
S23 |
179.6 |
179.9 |
H181 |
C18 |
C17 |
C22 |
179.1 |
180.3 |
C17 |
C18 |
H181 |
C19 |
180.0 |
179.9 |
H181 |
C18 |
C19 |
C20 |
182.5 |
179.9 |
H181 |
C18 |
C19 |
H191 |
2.5 |
359.9 |
C20 |
C19 |
C18 |
H181 |
182.5 |
179.9 |
C18 |
C19 |
C20 |
H191 |
180.0 |
180.0 |
C21 |
C20 |
C19 |
S23 |
177.3 |
180.1 |
C19 |
C20 |
C21 |
C22 |
2.0 |
359.7 |
C19 |
C20 |
C21 |
H211 |
182.0 |
179.9 |
C19 |
C20 |
S23 |
O24 |
188.6 |
202.6 |
C19 |
C20 |
S23 |
O25 |
316.7 |
337.5 |
C19 |
C20 |
S23 |
N26 |
72.1 |
90.1 |
H191 |
C19 |
C18 |
H181 |
2.5 |
359.9 |
C18 |
C19 |
H191 |
C20 |
180.0 |
180.0 |
H191 |
C19 |
C20 |
C21 |
176.9 |
180.0 |
H191 |
C19 |
C20 |
S23 |
359.6 |
360.0 |
C17 |
C22 |
C21 |
C20 |
359.7 |
0.6 |
C21 |
C20 |
C19 |
H191 |
176.9 |
180.0 |
C19 |
C20 |
C21 |
S23 |
182.8 |
179.9 |
C21 |
C20 |
S23 |
O24 |
11.3 |
22.6 |
C21 |
C20 |
S23 |
O25 |
139.4 |
157.4 |
C21 |
C20 |
S23 |
N26 |
254.8 |
270.0 |
C22 |
C21 |
C20 |
H211 |
180.0 |
179.8 |
C20 |
C21 |
C22 |
H221 |
179.7 |
180.0 |
S23 |
C20 |
C19 |
H191 |
359.6 |
360.0 |
C19 |
C20 |
S23 |
C21 |
177.3 |
180.1 |
S23 |
C20 |
C21 |
C22 |
179.2 |
179.8 |
S23 |
C20 |
C21 |
H211 |
359.2 |
360.0 |
O24 |
S23 |
C20 |
O25 |
231.8 |
225.2 |
O24 |
S23 |
C20 |
N26 |
116.5 |
112.6 |
O25 |
S23 |
C20 |
N26 |
244.6 |
247.4 |
C20 |
S23 |
N26 |
C27 |
67.8 |
60.0 |
C20 |
S23 |
N26 |
H26N |
302.5 |
240.0 |
C17 |
C22 |
C21 |
H221 |
180.0 |
180.5 |
C22 |
C21 |
C20 |
S23 |
179.2 |
179.8 |
C20 |
C21 |
C22 |
H211 |
180.0 |
180.2 |
H211 |
C21 |
C20 |
S23 |
359.2 |
360.0 |
C20 |
C21 |
H211 |
C22 |
180.0 |
179.8 |
H211 |
C21 |
C22 |
H221 |
359.7 |
359.8 |
C17 |
C22 |
H221 |
C21 |
180.0 |
179.5 |
H221 |
C22 |
C21 |
H211 |
359.7 |
359.8 |
C20 |
S23 |
O24 |
O25 |
121.0 |
123.2 |
C20 |
S23 |
O24 |
N26 |
243.3 |
246.3 |
O25 |
S23 |
O24 |
N26 |
122.3 |
123.1 |
O24 |
S23 |
N26 |
C27 |
308.6 |
307.4 |
O24 |
S23 |
N26 |
H26N |
183.3 |
127.4 |
C20 |
S23 |
O25 |
O24 |
235.9 |
236.8 |
C20 |
S23 |
O25 |
N26 |
114.4 |
113.7 |
O24 |
S23 |
O25 |
N26 |
238.6 |
236.9 |
O25 |
S23 |
N26 |
C27 |
180.8 |
172.6 |
O25 |
S23 |
N26 |
H26N |
55.5 |
352.6 |
C20 |
S23 |
N26 |
O24 |
119.2 |
112.6 |
C20 |
S23 |
N26 |
O25 |
247.0 |
247.4 |
O24 |
S23 |
N26 |
O25 |
127.8 |
134.8 |
C27 |
N26 |
S23 |
H26N |
125.3 |
180.0 |
S23 |
N26 |
C27 |
S28 |
212.3 |
180.0 |
S23 |
N26 |
C27 |
N31 |
33.0 |
359.7 |
S23 |
N26 |
C27 |
H26N |
234.7 |
180.0 |
S28 |
C27 |
N26 |
N31 |
179.3 |
180.4 |
N26 |
C27 |
S28 |
C29 |
177.3 |
180.0 |
N26 |
C27 |
N31 |
C30 |
180.8 |
179.8 |
S23 |
N26 |
H26N |
C27 |
134.6 |
180.0 |
H26N |
N26 |
C27 |
S28 |
337.6 |
0.0 |
H26N |
N26 |
C27 |
N31 |
158.3 |
179.7 |
S28 |
C27 |
N26 |
H26N |
337.6 |
0.0 |
N26 |
C27 |
S28 |
N31 |
180.6 |
179.7 |
S28 |
C27 |
N31 |
C30 |
1.5 |
359.6 |
C27 |
S28 |
C29 |
C30 |
4.3 |
360.0 |
C27 |
S28 |
C29 |
H291 |
184.3 |
180.0 |
N31 |
C27 |
N26 |
H26N |
158.3 |
179.7 |
N26 |
C27 |
N31 |
S28 |
179.4 |
180.3 |
N31 |
C27 |
S28 |
C29 |
356.7 |
0.3 |
C29 |
C30 |
N31 |
C27 |
1.8 |
0.5 |
C27 |
N31 |
C30 |
H301 |
181.8 |
180.3 |
C29 |
S28 |
C27 |
N31 |
356.7 |
0.3 |
C30 |
C29 |
S28 |
H291 |
180.0 |
180.0 |
S28 |
C29 |
C30 |
N31 |
355.8 |
359.8 |
S28 |
C29 |
C30 |
H301 |
175.8 |
180.0 |
C27 |
N31 |
C30 |
C29 |
1.8 |
0.5 |
S28 |
C29 |
C30 |
H291 |
180.0 |
180.0 |
N31 |
C30 |
C29 |
H301 |
180.0 |
179.8 |
S28 |
C29 |
H291 |
C30 |
180.0 |
180.0 |
H291 |
C29 |
C30 |
N31 |
175.8 |
179.8 |
H291 |
C29 |
C30 |
H301 |
355.8 |
360.0 |
N31 |
C30 |
C29 |
H291 |
175.8 |
179.8 |
C29 |
C30 |
N31 |
H301 |
180.0 |
180.2 |
H301 |
C30 |
C29 |
H291 |
355.8 |
360.0 |
C29 |
C30 |
H301 |
N31 |
180.0 |
179.8 |