PDB Chemical Component LS2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LS2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.368 1.343
N1 C8 1.368 1.390
N1 H1N 1.020 0.970
C2 C3 1.492 1.473
C2 O11 1.232 1.218
C3 C9 1.440 1.481
C3 N12 1.450 1.315
C4 C5 1.512 1.412
C4 C9 1.465 1.383
C4 S13 1.699 1.774
C5 C6 1.466 1.414
C5 N15 1.399 1.350
C6 C7 1.493 1.358
C6 H61 1.103 1.080
C7 C8 1.482 1.395
C7 H71 1.103 1.080
C8 C9 1.457 1.401
N12 N19 1.252 1.290
S13 C14 1.709 1.736
C14 N15 1.360 1.303
C14 H141 1.103 1.079
N19 C21 1.361 1.394
N19 H19N 1.020 0.971
C21 C22 1.483 1.390
C21 C26 1.504 1.389
C22 C23 1.478 1.381
C22 H221 1.103 1.080
C23 C24 1.487 1.383
C23 H231 1.103 1.079
C24 C25 1.479 1.383
C24 C29 1.502 1.507
C25 C26 1.457 1.381
C25 H251 1.103 1.079
C26 H261 1.103 1.080
C29 S34 1.795 1.814
C29 H291 1.115 1.090
C29 H292 1.115 1.090
S34 O35 1.442 1.421
S34 O36 1.440 1.420
S34 N37 1.648 1.656
N37 C39 1.453 1.464
N37 H37N 1.020 0.969
C39 H391 1.115 1.090
C39 H392 1.115 1.090
C39 H393 1.115 1.090

Bond Angles for LS2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C8 109.7 111.5
C2 N1 H1N 125.1 124.3
N1 C2 C3 109.2 107.8
N1 C2 O11 129.2 126.1
C8 N1 H1N 125.2 124.3
N1 C8 C7 130.4 132.0
N1 C8 C9 109.6 109.3
C3 C2 O11 121.6 126.1
C2 C3 C9 104.7 105.2
C2 C3 N12 125.9 127.4
C9 C3 N12 129.4 127.4
C3 C9 C4 131.2 134.2
C3 C9 C8 106.7 106.2
C3 N12 N19 124.7 120.0
C5 C4 C9 118.2 122.3
C5 C4 S13 110.8 102.1
C4 C5 C6 120.2 116.5
C4 C5 N15 108.5 114.4
C9 C4 S13 131.0 135.6
C4 C9 C8 122.1 119.5
C4 S13 C14 92.3 97.6
C6 C5 N15 131.3 129.1
C5 C6 C7 120.1 121.3
C5 C6 H61 119.0 119.4
C5 N15 C14 114.8 122.6
C7 C6 H61 120.9 119.4
C6 C7 C8 119.4 121.8
C6 C7 H71 120.7 119.1
C8 C7 H71 120.0 119.1
C7 C8 C9 120.0 118.7
N12 N19 C21 125.1 120.0
N12 N19 H19N 106.7 120.0
S13 C14 N15 113.5 103.3
S13 C14 H141 133.1 128.4
N15 C14 H141 113.4 128.3
C21 N19 H19N 106.7 120.0
N19 C21 C22 117.4 120.0
N19 C21 C26 123.0 120.1
C22 C21 C26 119.6 119.8
C21 C22 C23 119.7 119.9
C21 C22 H221 120.3 120.1
C21 C26 C25 120.0 119.9
C21 C26 H261 121.6 120.0
C23 C22 H221 120.0 120.0
C22 C23 C24 119.9 120.1
C22 C23 H231 119.8 120.0
C24 C23 H231 120.3 119.9
C23 C24 C25 120.3 120.1
C23 C24 C29 121.2 119.9
C25 C24 C29 118.3 120.0
C24 C25 C26 119.9 120.1
C24 C25 H251 120.8 120.0
C24 C29 S34 116.6 109.5
C24 C29 H291 109.6 109.5
C24 C29 H292 109.6 109.5
C26 C25 H251 119.3 119.9
C25 C26 H261 118.4 120.0
S34 C29 H291 109.6 109.5
S34 C29 H292 109.7 109.5
C29 S34 O35 109.1 111.6
C29 S34 O36 109.4 111.6
C29 S34 N37 109.0 103.2
H291 C29 H292 100.5 109.5
O35 S34 O36 118.5 122.1
O35 S34 N37 106.4 102.8
O36 S34 N37 104.1 102.8
S34 N37 C39 122.7 120.0
S34 N37 H37N 107.5 120.0
C39 N37 H37N 107.5 120.0
N37 C39 H391 107.5 109.5
N37 C39 H392 122.7 109.4
N37 C39 H393 107.5 109.5
H391 C39 H392 107.5 109.4
H391 C39 H393 102.2 109.5
H392 C39 H393 107.5 109.5

Torsion Angles for LS2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C8 N1 C2 H1N 180.0 180.0
C2 N1 C8 C7 182.3 180.0
C2 N1 C8 C9 2.9 359.7
C3 C2 N1 O11 179.6 180.1
N1 C2 C3 C9 1.2 0.3
N1 C2 C3 N12 180.3 180.1
C2 N1 C8 H1N 180.0 180.0
C8 N1 C2 C3 357.4 0.0
C8 N1 C2 O11 177.8 180.0
C3 C9 C8 N1 357.9 0.4
C4 C9 C8 N1 179.0 179.6
C6 C7 C8 N1 178.9 180.0
N1 C8 C7 H71 358.9 0.0
C7 C8 N1 C9 179.4 180.3
C2 N1 H1N C8 180.0 180.0
H1N N1 C2 C3 177.4 180.0
H1N N1 C2 O11 357.8 359.9
H1N N1 C8 C7 2.3 360.0
H1N N1 C8 C9 182.9 179.7
C3 C2 N1 C8 357.4 0.0
C3 C2 N1 H1N 177.4 180.0
N1 C2 C3 O11 180.4 179.9
C9 C3 C2 N12 180.9 180.2
C2 C3 C9 C4 179.3 180.6
C2 C3 C9 C8 0.5 359.6
C2 C3 N12 N19 26.1 359.9
O11 C2 N1 C8 177.8 180.0
O11 C2 N1 H1N 357.8 359.9
N1 C2 O11 C3 179.5 180.1
O11 C2 C3 C9 180.9 180.3
O11 C2 C3 N12 360.0 0.1
N1 C8 C9 C3 357.9 0.4
C9 C3 C2 O11 180.9 180.3
C2 C3 C9 N12 179.1 179.8
C9 C3 N12 N19 204.9 179.7
C5 C4 C9 C3 183.8 179.6
C3 C9 C4 S13 3.5 359.1
C4 C9 C3 C8 178.8 181.0
C7 C8 C9 C3 178.5 180.2
N12 C3 C2 O11 360.0 0.1
C2 C3 N12 C9 181.1 180.2
N12 C3 C9 C4 0.3 0.8
N12 C3 C9 C8 181.4 179.8
C3 N12 N19 C21 183.0 180.1
C3 N12 N19 H19N 57.7 0.1
C3 C9 C4 C5 183.8 179.6
C9 C4 C5 S13 179.8 179.7
C5 C4 C9 C8 2.5 0.6
C5 C4 S13 C14 2.2 360.0
C6 C5 C4 N15 180.9 180.0
C4 C5 C6 C7 0.0 359.9
C4 C5 C6 H61 180.0 180.1
C4 C5 N15 C14 2.4 0.0
N1 C8 C9 C4 179.0 179.6
C4 C9 C3 N12 0.3 0.8
C3 C9 C4 C8 181.3 178.9
C5 C4 C9 S13 180.3 180.4
C9 C4 C5 C6 357.8 359.7
C9 C4 C5 N15 176.8 179.7
C9 C4 S13 C14 182.4 180.4
C7 C8 C9 C4 359.5 359.4
C5 C4 S13 C9 179.7 179.6
S13 C4 C5 C6 178.0 180.0
S13 C4 C5 N15 357.0 360.0
S13 C4 C9 C8 182.2 180.2
C4 S13 C14 N15 359.1 0.0
C4 S13 C14 H141 179.1 180.0
C6 C5 C4 C9 357.8 359.7
C6 C5 C4 S13 178.0 180.0
C4 C5 C6 N15 178.8 180.0
C6 C5 N15 C14 181.3 180.0
C7 C6 C5 H61 180.0 179.9
C5 C6 C7 C8 2.0 0.1
C5 C6 C7 H71 182.0 180.0
N15 C5 C4 C9 176.8 179.7
N15 C5 C4 S13 357.0 360.0
C4 C5 N15 C6 181.1 180.0
N15 C5 C6 C7 181.2 180.0
N15 C5 C6 H61 1.2 0.1
S13 C14 N15 C5 359.2 359.9
C5 N15 C14 H141 179.2 180.0
N1 C8 C7 C6 178.9 180.0
C7 C6 C5 N15 181.2 180.0
C5 C6 C7 H61 180.0 180.1
C8 C7 C6 H71 180.0 180.0
C6 C7 C8 C9 358.2 0.3
H61 C6 C5 N15 1.2 0.1
C5 C6 H61 C7 180.0 179.9
H61 C6 C7 C8 182.0 179.9
H61 C6 C7 H71 2.0 359.9
C7 C8 N1 H1N 2.3 360.0
N1 C8 C7 C9 180.7 179.7
C3 C9 C8 C7 178.5 180.2
C4 C9 C8 C7 359.5 359.4
C8 C7 C6 H61 182.0 179.9
C6 C7 C8 H71 180.0 180.0
H71 C7 C6 H61 2.0 359.9
C6 C7 H71 C8 180.0 180.0
H71 C7 C8 C9 178.2 180.3
C9 C8 N1 H1N 182.9 179.7
N1 C8 C9 C7 179.5 180.2
C8 C9 C3 N12 181.4 179.8
C3 C9 C8 C4 179.0 180.8
C8 C9 C4 S13 182.2 180.2
C9 C8 C7 H71 178.2 180.3
C21 N19 N12 H19N 125.3 180.0
N12 N19 C21 C22 132.9 180.0
N12 N19 C21 C26 315.6 360.0
C5 N15 C14 S13 359.2 359.9
N15 C14 S13 H141 180.0 180.1
S13 C14 N15 H141 180.0 179.9
S13 C14 H141 N15 180.0 180.1
N12 N19 C21 H19N 234.7 180.0
C22 C21 N19 C26 177.3 180.0
N19 C21 C22 C23 187.1 180.0
N19 C21 C22 H221 7.2 0.0
N19 C21 C26 C25 168.8 179.7
N19 C21 C26 H261 348.8 0.0
N12 N19 H19N C21 135.8 180.0
H19N N19 C21 C22 258.2 0.0
H19N N19 C21 C26 80.9 180.0
C22 C21 N19 H19N 258.2 0.0
N19 C21 C22 C26 182.6 180.0
C22 C21 C26 C25 351.6 359.7
C22 C21 C26 H261 171.6 180.0
C23 C22 C21 H221 180.0 180.0
C21 C22 C23 C24 358.1 0.0
C21 C22 C23 H231 178.1 180.0
C26 C21 N19 H19N 80.9 180.0
N19 C21 C26 C22 177.2 180.0
C26 C21 C22 C23 4.5 360.0
C26 C21 C22 H221 184.5 180.0
C24 C25 C26 C21 9.4 0.6
C21 C26 C25 H251 189.5 180.0
C25 C26 C21 H261 180.0 179.7
C23 C22 C21 C26 4.5 360.0
C21 C22 C23 H221 180.0 180.0
C24 C23 C22 H231 180.0 180.0
C22 C23 C24 C25 2.9 0.3
C22 C23 C24 C29 188.5 179.9
H221 C22 C21 C26 184.5 180.0
C21 C22 H221 C23 180.0 180.0
H221 C22 C23 C24 178.1 180.0
H221 C22 C23 H231 358.1 360.0
C24 C23 C22 H221 178.1 180.0
C22 C23 C24 H231 180.0 180.0
C25 C24 C23 C29 174.4 180.3
C23 C24 C25 C26 353.3 359.4
C23 C24 C25 H251 173.2 180.0
C23 C24 C29 S34 109.8 90.0
C23 C24 C29 H291 344.5 330.0
C23 C24 C29 H292 235.1 210.0
H231 C23 C22 H221 358.1 360.0
C22 C23 H231 C24 180.0 180.0
H231 C23 C24 C25 182.9 180.3
H231 C23 C24 C29 8.5 359.9
C21 C26 C25 C24 9.4 0.6
C25 C24 C23 H231 182.9 180.3
C23 C24 C25 C29 185.4 179.7
C25 C24 C29 S34 295.3 269.7
C25 C24 C29 H291 170.0 149.7
C25 C24 C29 H292 60.5 29.7
C26 C25 C24 H251 180.0 179.4
C24 C25 C26 H261 189.5 180.3
C29 C24 C23 H231 8.5 359.9
C23 C24 C29 C25 174.5 180.3
C29 C24 C25 C26 167.8 179.8
C29 C24 C25 H251 347.8 0.4
S34 C29 C24 H291 125.3 120.0
S34 C29 C24 H292 234.7 240.0
C24 C29 S34 O35 319.8 70.2
C24 C29 S34 O36 188.8 289.7
C24 C29 S34 N37 75.6 180.0
H291 C29 C24 H292 109.5 120.0
C21 C26 C25 H261 180.0 180.3
C26 C25 C24 C29 167.8 179.8
C24 C25 C26 H251 180.0 180.6
H251 C25 C24 C29 347.8 0.4
C24 C25 H251 C26 180.0 179.4
H251 C25 C26 H261 9.5 359.7
C21 C26 H261 C25 180.0 179.7
H261 C26 C25 H251 9.5 359.7
C24 C29 S34 H291 234.7 240.0
C24 C29 S34 H292 125.3 120.0
H291 C29 S34 H292 250.5 240.0
O35 S34 C29 O36 131.0 140.5
O35 S34 C29 N37 244.2 250.3
O36 S34 C29 N37 113.2 109.8
C29 S34 N37 C39 55.7 60.1
C29 S34 N37 H37N 290.4 240.0
C24 C29 H291 S34 129.2 120.0
C24 C29 H291 H292 244.6 240.0
S34 C29 H291 H292 115.4 120.0
H291 C29 S34 O35 85.1 190.3
H291 C29 S34 O36 314.1 49.8
H291 C29 S34 N37 200.9 300.0
C24 C29 H292 S34 230.8 240.0
C24 C29 H292 H291 115.4 120.0
S34 C29 H292 H291 244.6 240.0
H292 C29 S34 O35 194.5 310.3
H292 C29 S34 O36 63.5 169.8
H292 C29 S34 N37 310.3 60.0
O35 S34 C29 H291 85.1 190.3
O35 S34 C29 H292 194.5 310.3
C29 S34 O35 O36 234.1 224.3
C29 S34 O35 N37 117.5 110.0
O36 S34 O35 N37 243.4 245.7
O35 S34 N37 C39 173.2 176.2
O35 S34 N37 H37N 47.9 356.2
O36 S34 C29 H291 314.1 49.8
O36 S34 C29 H292 63.5 169.8
C29 S34 O36 O35 125.8 135.7
C29 S34 O36 N37 243.6 250.0
O35 S34 O36 N37 117.9 114.3
O36 S34 N37 C39 299.1 303.8
O36 S34 N37 H37N 173.8 123.8
N37 S34 C29 H291 200.9 300.0
N37 S34 C29 H292 310.3 60.0
C29 S34 N37 O35 242.5 243.8
C29 S34 N37 O36 116.6 116.2
O35 S34 N37 O36 234.1 232.4
C39 N37 S34 H37N 125.3 180.0
S34 N37 C39 H391 54.7 180.0
S34 N37 C39 H392 180.0 299.9
S34 N37 C39 H393 305.3 60.0
S34 N37 C39 H37N 234.8 180.0
H391 C39 N37 H392 234.7 240.1
H391 C39 N37 H393 109.4 120.1
H392 C39 N37 H393 234.7 239.9
S34 N37 H37N C39 133.9 180.0
H37N N37 C39 H391 180.0 0.1
H37N N37 C39 H392 305.3 120.0
H37N N37 C39 H393 70.5 240.0
H391 C39 N37 H37N 180.0 0.1
N37 C39 H391 H392 133.9 119.9
N37 C39 H391 H393 247.0 239.9
H392 C39 H391 H393 113.0 120.0
H392 C39 N37 H37N 305.3 120.0
N37 C39 H392 H391 234.7 240.1
N37 C39 H392 H393 125.3 120.0
H391 C39 H392 H393 250.6 240.0
H393 C39 N37 H37N 70.5 240.0
N37 C39 H393 H391 113.1 120.0
N37 C39 H393 H392 226.1 240.0
H391 C39 H393 H392 113.0 120.0