PDB Chemical Component LRH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LRH
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.526 |
1.531 |
C2 |
C3 |
1.523 |
1.529 |
C3 |
C4 |
1.520 |
1.517 |
C4 |
C5 |
1.534 |
1.530 |
C5 |
C6 |
1.523 |
1.522 |
C1 |
O1 |
1.436 |
1.418 |
C2 |
O2 |
1.452 |
1.424 |
C3 |
O3 |
1.452 |
1.427 |
C4 |
O4 |
1.412 |
1.424 |
C2 |
O5 |
1.444 |
1.436 |
C5 |
O5 |
1.446 |
1.442 |
C1 |
H11 |
1.100 |
1.091 |
C1 |
H12 |
1.100 |
1.091 |
O1 |
HO1 |
0.950 |
0.973 |
C3 |
H3 |
1.100 |
1.094 |
O2 |
HO2 |
0.950 |
0.969 |
C4 |
H4 |
1.100 |
1.095 |
O3 |
HO3 |
0.950 |
0.973 |
C5 |
H5 |
1.100 |
1.095 |
O4 |
HO4 |
0.950 |
0.973 |
C6 |
H61 |
1.100 |
1.093 |
C6 |
H62 |
1.100 |
1.094 |
C6 |
H6C3 |
1.100 |
1.095 |
Bond Angles for LRH
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
113.8 |
113.1 |
C2 |
C1 |
O1 |
109.9 |
108.7 |
C1 |
C2 |
O2 |
107.5 |
109.0 |
C1 |
C2 |
O5 |
108.8 |
108.6 |
C2 |
C1 |
H11 |
109.3 |
110.2 |
C2 |
C1 |
H12 |
109.2 |
110.2 |
C2 |
C3 |
C4 |
99.9 |
103.6 |
C3 |
C2 |
O2 |
111.7 |
109.6 |
C2 |
C3 |
O3 |
112.3 |
110.7 |
C3 |
C2 |
O5 |
106.2 |
104.9 |
C2 |
C3 |
H3 |
116.4 |
112.2 |
C3 |
C4 |
C5 |
100.9 |
103.9 |
C4 |
C3 |
O3 |
116.2 |
108.4 |
C3 |
C4 |
O4 |
113.0 |
109.1 |
C4 |
C3 |
H3 |
112.6 |
114.2 |
C3 |
C4 |
H4 |
113.3 |
113.7 |
C4 |
C5 |
C6 |
114.7 |
113.1 |
C5 |
C4 |
O4 |
111.0 |
109.9 |
C4 |
C5 |
O5 |
105.2 |
107.6 |
C5 |
C4 |
H4 |
115.3 |
112.5 |
C4 |
C5 |
H5 |
108.9 |
111.6 |
C6 |
C5 |
O5 |
109.1 |
107.9 |
C6 |
C5 |
H5 |
104.9 |
108.8 |
C5 |
C6 |
H61 |
109.5 |
110.6 |
C5 |
C6 |
H62 |
109.5 |
110.6 |
C5 |
C6 |
H6C3 |
109.5 |
110.6 |
O1 |
C1 |
H11 |
109.3 |
109.1 |
O1 |
C1 |
H12 |
109.2 |
109.1 |
C1 |
O1 |
HO1 |
109.5 |
106.9 |
O2 |
C2 |
O5 |
108.7 |
111.6 |
C2 |
O2 |
HO2 |
109.5 |
106.4 |
O3 |
C3 |
H3 |
100.2 |
107.6 |
C3 |
O3 |
HO3 |
109.5 |
107.2 |
O4 |
C4 |
H4 |
103.7 |
107.6 |
C4 |
O4 |
HO4 |
109.5 |
107.0 |
C2 |
O5 |
C5 |
108.4 |
109.3 |
O5 |
C5 |
H5 |
114.4 |
107.6 |
H11 |
C1 |
H12 |
109.8 |
109.5 |
H61 |
C6 |
H62 |
109.4 |
108.4 |
H61 |
C6 |
H6C3 |
109.4 |
108.4 |
H62 |
C6 |
H6C3 |
109.5 |
108.3 |
Torsion Angles for LRH
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
C4 |
156.1 |
85.3 |
C3 |
C2 |
C1 |
O2 |
124.3 |
122.1 |
C1 |
C2 |
C3 |
O3 |
279.9 |
201.4 |
C3 |
C2 |
C1 |
O5 |
241.9 |
243.9 |
C1 |
C2 |
C3 |
H3 |
34.6 |
321.7 |
O1 |
C1 |
C2 |
H11 |
240.0 |
119.6 |
O1 |
C1 |
C2 |
H12 |
119.8 |
240.5 |
C2 |
C1 |
O1 |
HO1 |
204.5 |
290.8 |
O2 |
C2 |
C1 |
O5 |
117.6 |
121.8 |
C1 |
C2 |
O2 |
HO2 |
197.7 |
287.3 |
C1 |
C2 |
O5 |
C5 |
222.3 |
265.3 |
H11 |
C1 |
C2 |
H12 |
239.8 |
121.0 |
C3 |
C2 |
C1 |
O1 |
181.7 |
179.6 |
C1 |
C2 |
C3 |
O2 |
238.0 |
238.2 |
C1 |
C2 |
C3 |
O5 |
119.6 |
118.3 |
C3 |
C2 |
C1 |
H11 |
301.7 |
60.0 |
C3 |
C2 |
C1 |
H12 |
61.9 |
299.0 |
C2 |
C3 |
C4 |
C5 |
317.2 |
26.6 |
C4 |
C3 |
C2 |
O3 |
236.3 |
243.9 |
C2 |
C3 |
C4 |
O4 |
198.6 |
269.4 |
C4 |
C3 |
C2 |
H3 |
121.5 |
123.6 |
C2 |
C3 |
C4 |
H4 |
81.0 |
149.3 |
O2 |
C2 |
C3 |
O5 |
241.6 |
240.0 |
C3 |
C2 |
O2 |
HO2 |
72.2 |
163.0 |
O3 |
C3 |
C2 |
H3 |
245.3 |
239.7 |
C2 |
C3 |
O3 |
HO3 |
253.8 |
18.0 |
C3 |
C2 |
O5 |
C5 |
345.2 |
26.6 |
C4 |
C3 |
C2 |
O2 |
278.2 |
207.1 |
C2 |
C3 |
C4 |
O3 |
121.0 |
117.6 |
C4 |
C3 |
C2 |
O5 |
36.5 |
327.0 |
C2 |
C3 |
C4 |
H3 |
235.8 |
237.6 |
C3 |
C4 |
C5 |
C6 |
155.5 |
107.6 |
C5 |
C4 |
C3 |
O4 |
118.6 |
117.2 |
C3 |
C4 |
C5 |
O5 |
35.6 |
348.5 |
C5 |
C4 |
C3 |
H4 |
236.2 |
237.3 |
C3 |
C4 |
C5 |
H5 |
272.6 |
230.7 |
O3 |
C3 |
C4 |
H3 |
114.8 |
120.0 |
C4 |
C3 |
O3 |
HO3 |
8.0 |
131.1 |
O4 |
C4 |
C3 |
H4 |
117.6 |
120.1 |
C3 |
C4 |
O4 |
HO4 |
171.5 |
144.3 |
C5 |
C4 |
C3 |
O3 |
196.2 |
268.9 |
C3 |
C4 |
C5 |
O4 |
240.0 |
243.4 |
C5 |
C4 |
C3 |
H3 |
81.4 |
149.0 |
C3 |
C4 |
C5 |
H4 |
122.5 |
123.5 |
C6 |
C5 |
C4 |
O5 |
119.9 |
119.1 |
C6 |
C5 |
C4 |
H5 |
242.9 |
236.9 |
C4 |
C5 |
C6 |
H61 |
232.9 |
328.4 |
C4 |
C5 |
C6 |
H62 |
352.9 |
88.5 |
C4 |
C5 |
C6 |
H6C3 |
113.0 |
208.4 |
O4 |
C4 |
C5 |
H4 |
242.5 |
240.2 |
C5 |
C4 |
O4 |
HO4 |
58.9 |
31.0 |
C2 |
O5 |
C5 |
C4 |
346.9 |
350.5 |
O5 |
C5 |
C4 |
H5 |
123.1 |
117.8 |
C6 |
C5 |
C4 |
O4 |
275.5 |
224.2 |
C4 |
C5 |
C6 |
O5 |
242.4 |
241.1 |
C6 |
C5 |
C4 |
H4 |
33.0 |
344.1 |
C4 |
C5 |
C6 |
H5 |
119.3 |
124.7 |
C2 |
O5 |
C5 |
C6 |
223.4 |
228.1 |
O5 |
C5 |
C6 |
H5 |
237.0 |
243.6 |
H61 |
C6 |
C5 |
H62 |
240.0 |
239.9 |
H61 |
C6 |
C5 |
H6C3 |
119.9 |
120.0 |
H62 |
C6 |
C5 |
H6C3 |
239.9 |
240.1 |
O1 |
C1 |
C2 |
C3 |
181.7 |
179.6 |
O1 |
C1 |
C2 |
O2 |
57.4 |
57.4 |
O1 |
C1 |
C2 |
O5 |
299.8 |
295.7 |
C2 |
C1 |
O1 |
H11 |
120.0 |
239.8 |
C2 |
C1 |
O1 |
H12 |
240.2 |
120.2 |
H11 |
C1 |
O1 |
H12 |
120.2 |
240.4 |
C1 |
C2 |
O2 |
C3 |
125.5 |
124.3 |
O2 |
C2 |
C1 |
O1 |
57.4 |
57.4 |
C1 |
C2 |
O2 |
O5 |
242.4 |
240.0 |
O2 |
C2 |
C1 |
H11 |
177.4 |
297.9 |
O2 |
C2 |
C1 |
H12 |
297.6 |
176.9 |
O2 |
C2 |
C3 |
C4 |
278.2 |
207.1 |
O2 |
C2 |
C3 |
O3 |
41.9 |
323.2 |
C3 |
C2 |
O2 |
O5 |
116.8 |
115.8 |
O2 |
C2 |
C3 |
H3 |
156.6 |
83.4 |
O2 |
C2 |
O5 |
C5 |
105.5 |
145.2 |
C2 |
C3 |
O3 |
C4 |
245.9 |
247.0 |
O3 |
C3 |
C2 |
O2 |
41.9 |
323.2 |
O3 |
C3 |
C2 |
O5 |
160.3 |
83.1 |
C2 |
C3 |
O3 |
H3 |
124.3 |
123.0 |
O3 |
C3 |
C4 |
C5 |
196.2 |
268.9 |
O3 |
C3 |
C4 |
O4 |
77.6 |
151.8 |
C4 |
C3 |
O3 |
H3 |
238.4 |
236.0 |
O3 |
C3 |
C4 |
H4 |
320.0 |
31.7 |
C3 |
C4 |
O4 |
C5 |
112.5 |
113.3 |
O4 |
C4 |
C3 |
O3 |
77.6 |
151.8 |
O4 |
C4 |
C3 |
H3 |
322.8 |
31.8 |
C3 |
C4 |
O4 |
H4 |
236.9 |
236.2 |
O4 |
C4 |
C5 |
C6 |
275.5 |
224.2 |
O4 |
C4 |
C5 |
O5 |
155.7 |
105.1 |
C5 |
C4 |
O4 |
H4 |
124.4 |
122.8 |
O4 |
C4 |
C5 |
H5 |
32.6 |
347.3 |
C1 |
C2 |
O5 |
C3 |
237.1 |
238.7 |
O5 |
C2 |
C1 |
O1 |
299.8 |
295.7 |
C1 |
C2 |
O5 |
O2 |
116.8 |
120.1 |
O5 |
C2 |
C1 |
H11 |
59.8 |
176.1 |
O5 |
C2 |
C1 |
H12 |
180.0 |
55.1 |
O5 |
C2 |
C3 |
C4 |
36.5 |
327.0 |
C3 |
C2 |
O5 |
O2 |
239.7 |
241.4 |
O5 |
C2 |
C3 |
O3 |
160.3 |
83.1 |
O5 |
C2 |
C3 |
H3 |
275.0 |
203.4 |
C4 |
C5 |
O5 |
C2 |
346.9 |
350.5 |
C6 |
C5 |
O5 |
C2 |
223.4 |
228.1 |
O5 |
C2 |
O2 |
HO2 |
315.4 |
47.3 |
C2 |
O5 |
C5 |
H5 |
106.3 |
110.9 |
C4 |
C5 |
O5 |
C6 |
123.5 |
122.4 |
O5 |
C5 |
C4 |
O4 |
155.7 |
105.1 |
O5 |
C5 |
C4 |
H4 |
273.2 |
225.0 |
C4 |
C5 |
O5 |
H5 |
240.6 |
239.6 |
C6 |
C5 |
O5 |
H5 |
117.1 |
117.2 |
O5 |
C5 |
C6 |
H61 |
350.6 |
87.3 |
O5 |
C5 |
C6 |
H62 |
110.6 |
207.4 |
O5 |
C5 |
C6 |
H6C3 |
230.6 |
327.3 |
H11 |
C1 |
C2 |
C3 |
301.7 |
60.0 |
C2 |
C1 |
H11 |
O1 |
239.6 |
119.3 |
H11 |
C1 |
C2 |
O2 |
177.4 |
297.9 |
H11 |
C1 |
C2 |
O5 |
59.8 |
176.1 |
C2 |
C1 |
H11 |
H12 |
119.8 |
238.7 |
O1 |
C1 |
H11 |
H12 |
240.2 |
119.3 |
H11 |
C1 |
O1 |
HO1 |
84.4 |
51.1 |
H12 |
C1 |
C2 |
C3 |
61.9 |
299.0 |
C2 |
C1 |
H12 |
O1 |
120.2 |
240.7 |
H12 |
C1 |
C2 |
O2 |
297.6 |
176.9 |
H12 |
C1 |
C2 |
O5 |
180.0 |
55.1 |
C2 |
C1 |
H12 |
H11 |
240.1 |
121.4 |
O1 |
C1 |
H12 |
H11 |
119.8 |
240.6 |
H12 |
C1 |
O1 |
HO1 |
324.3 |
170.7 |
HO1 |
O1 |
C1 |
H11 |
84.4 |
51.1 |
HO1 |
O1 |
C1 |
H12 |
324.3 |
170.7 |
C2 |
C3 |
H3 |
C4 |
114.5 |
117.5 |
H3 |
C3 |
C2 |
O2 |
156.6 |
83.4 |
C2 |
C3 |
H3 |
O3 |
238.6 |
238.0 |
H3 |
C3 |
C2 |
O5 |
275.0 |
203.4 |
H3 |
C3 |
C4 |
C5 |
81.4 |
149.0 |
C4 |
C3 |
H3 |
O3 |
124.1 |
120.4 |
H3 |
C3 |
C4 |
O4 |
322.8 |
31.8 |
H3 |
C3 |
C4 |
H4 |
205.2 |
271.7 |
H3 |
C3 |
O3 |
HO3 |
129.6 |
255.0 |
HO2 |
O2 |
C2 |
O5 |
315.4 |
47.3 |
C3 |
C4 |
H4 |
C5 |
244.4 |
242.1 |
H4 |
C4 |
C3 |
O3 |
320.0 |
31.7 |
C3 |
C4 |
H4 |
O4 |
122.9 |
121.0 |
H4 |
C4 |
C3 |
H3 |
205.2 |
271.7 |
H4 |
C4 |
C5 |
C6 |
33.0 |
344.1 |
C5 |
C4 |
H4 |
O4 |
238.5 |
238.8 |
H4 |
C4 |
C5 |
O5 |
273.2 |
225.0 |
H4 |
C4 |
C5 |
H5 |
150.1 |
107.1 |
H4 |
C4 |
O4 |
HO4 |
294.6 |
268.2 |
HO3 |
O3 |
C3 |
H3 |
129.6 |
255.0 |
C4 |
C5 |
H5 |
C6 |
236.9 |
234.5 |
H5 |
C5 |
C4 |
O4 |
32.6 |
347.3 |
C4 |
C5 |
H5 |
O5 |
117.3 |
117.9 |
H5 |
C5 |
C4 |
H4 |
150.1 |
107.1 |
C6 |
C5 |
H5 |
O5 |
240.5 |
243.4 |
H5 |
C5 |
C6 |
H61 |
113.6 |
203.8 |
H5 |
C5 |
C6 |
H62 |
233.6 |
323.8 |
H5 |
C5 |
C6 |
H6C3 |
353.7 |
83.7 |
HO4 |
O4 |
C4 |
H4 |
294.6 |
268.2 |
H61 |
C6 |
C5 |
O5 |
350.6 |
87.3 |
H61 |
C6 |
C5 |
H5 |
113.6 |
203.8 |
C5 |
C6 |
H61 |
H62 |
120.0 |
121.3 |
C5 |
C6 |
H61 |
H6C3 |
240.0 |
238.7 |
H62 |
C6 |
H61 |
H6C3 |
120.0 |
117.3 |
H62 |
C6 |
C5 |
O5 |
110.6 |
207.4 |
H62 |
C6 |
C5 |
H5 |
233.6 |
323.8 |
C5 |
C6 |
H62 |
H61 |
240.0 |
238.6 |
C5 |
C6 |
H62 |
H6C3 |
120.0 |
121.3 |
H61 |
C6 |
H62 |
H6C3 |
240.1 |
242.6 |
H6C3 |
C6 |
C5 |
O5 |
230.6 |
327.3 |
H6C3 |
C6 |
C5 |
H5 |
353.7 |
83.7 |
C5 |
C6 |
H6C3 |
H61 |
120.0 |
121.3 |
C5 |
C6 |
H6C3 |
H62 |
240.0 |
238.7 |
H61 |
C6 |
H6C3 |
H62 |
119.9 |
117.4 |