PDB Chemical Component LPM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LPM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O	1.231	1.213
C1	N	1.322	1.347
C1	C2	1.520	1.506
N	HN1	1.020	0.970
N	HN2	1.021	0.970
C2	C3	1.517	1.529
C2	H21	1.115	1.091
C2	H22	1.114	1.090
C3	C4	1.558	1.529
C3	H31	1.115	1.091
C3	H32	1.114	1.089
C4	C5	1.558	1.529
C4	H41	1.115	1.091
C4	H42	1.116	1.089
C5	C6	1.520	1.529
C5	H51	1.114	1.091
C5	H52	1.115	1.090
C6	S6	1.808	1.814
C6	C7	1.500	1.530
C6	H6	1.115	1.090
S6	HS6	0.951	1.345
C7	C8	1.515	1.530
C7	H71	1.114	1.090
C7	H72	1.114	1.089
C8	S8	1.817	1.814
C8	H81	1.115	1.090
C8	H82	1.115	1.089
S8	HS8	0.951	1.345

Bond Angles for LPM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O	C1	N	119.6	120.0
O	C1	C2	119.8	120.0
N	C1	C2	120.6	120.1
C1	N	HN1	120.6	120.1
C1	N	HN2	119.6	120.0
C1	C2	C3	117.2	109.6
C1	C2	H21	109.4	109.4
C1	C2	H22	109.4	109.5
HN1	N	HN2	119.7	119.9
C3	C2	H21	109.4	109.4
C3	C2	H22	109.4	109.5
C2	C3	C4	117.4	109.5
C2	C3	H31	109.4	109.4
C2	C3	H32	109.4	109.5
H21	C2	H22	100.8	109.4
C4	C3	H31	109.3	109.4
C4	C3	H32	109.3	109.5
C3	C4	C5	122.8	109.5
C3	C4	H41	107.5	109.4
C3	C4	H42	107.5	109.5
H31	C3	H32	100.7	109.4
C5	C4	H41	107.5	109.4
C5	C4	H42	107.4	109.5
C4	C5	C6	114.4	109.5
C4	C5	H51	110.4	109.4
C4	C5	H52	110.4	109.5
H41	C4	H42	102.3	109.4
C6	C5	H51	110.4	109.4
C6	C5	H52	110.4	109.5
C5	C6	S6	111.6	109.5
C5	C6	C7	114.0	109.5
C5	C6	H6	104.6	109.4
H51	C5	H52	99.9	109.4
S6	C6	C7	109.0	109.5
S6	C6	H6	110.0	109.4
C6	S6	HS6	111.6	100.0
C7	C6	H6	107.4	109.4
C6	C7	C8	110.0	109.5
C6	C7	H71	112.0	109.4
C6	C7	H72	112.0	109.5
C8	C7	H71	112.0	109.4
C8	C7	H72	112.0	109.5
C7	C8	S8	113.6	109.5
C7	C8	H81	110.7	109.4
C7	C8	H82	110.7	109.5
H71	C7	H72	98.4	109.4
S8	C8	H81	110.7	109.4
S8	C8	H82	110.7	109.5
C8	S8	HS8	113.6	100.0
H81	C8	H82	99.6	109.5

Torsion Angles for LPM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N	C1	O	C2	177.6	180.0
O	C1	N	HN1	2.5	0.0
O	C1	N	HN2	179.9	179.7
O	C1	C2	C3	234.2	0.1
O	C1	C2	H21	359.4	120.0
O	C1	C2	H22	109.0	239.9
O	C1	N	C2	182.4	180.0
N	C1	C2	C3	56.6	180.0
N	C1	C2	H21	181.8	300.0
N	C1	C2	H22	291.4	59.9
HN1	N	C1	HN2	182.5	180.3
O	C1	C2	N	177.6	180.0
C2	C1	N	HN1	180.0	180.0
C2	C1	N	HN2	357.5	359.7
C3	C2	C1	H21	234.8	240.1
C3	C2	C1	H22	125.2	120.1
C1	C2	C3	C4	285.2	180.0
C1	C2	C3	H31	50.5	300.0
C1	C2	C3	H32	159.9	59.9
H21	C2	C1	H22	250.4	240.1
HN1	N	C1	C2	180.0	180.0
C1	N	HN1	HN2	177.5	179.7
HN2	N	C1	C2	357.5	359.7
C1	N	HN2	HN1	182.5	180.3
C1	C2	C3	H21	125.2	120.0
C1	C2	C3	H22	234.8	239.9
H21	C2	C3	H22	109.5	119.9
C4	C3	C2	H31	234.7	240.1
C4	C3	C2	H32	125.3	120.1
C2	C3	C4	C5	266.4	180.0
C2	C3	C4	H41	31.7	299.9
C2	C3	C4	H42	141.1	59.9
H31	C3	C2	H32	250.5	240.1
C1	C2	H21	C3	230.4	240.0
C1	C2	H21	H22	115.2	120.0
C3	C2	H21	H22	244.8	240.0
H21	C2	C3	C4	160.0	60.1
H21	C2	C3	H31	285.2	180.0
H21	C2	C3	H32	34.7	299.9
C1	C2	H22	C3	129.6	120.2
C1	C2	H22	H21	244.8	240.1
C3	C2	H22	H21	115.2	119.9
H22	C2	C3	C4	50.4	300.2
H22	C2	C3	H31	175.7	60.1
H22	C2	C3	H32	285.2	180.0
C4	C3	C2	H21	160.0	60.1
C4	C3	C2	H22	50.4	300.2
C2	C3	C4	H31	125.3	119.9
C2	C3	C4	H32	234.7	239.9
H31	C3	C4	H32	109.4	120.0
C5	C4	C3	H41	234.7	240.1
C5	C4	C3	H42	125.3	120.1
C3	C4	C5	C6	231.1	179.9
C3	C4	C5	H51	356.3	299.9
C3	C4	C5	H52	105.9	59.9
H41	C4	C3	H42	250.5	240.0
H31	C3	C2	H21	285.2	180.0
H31	C3	C2	H22	175.7	60.1
C2	C3	H31	C4	230.2	240.0
C2	C3	H31	H32	115.1	120.0
C4	C3	H31	H32	245.0	240.0
H31	C3	C4	C5	141.1	60.1
H31	C3	C4	H41	266.4	180.0
H31	C3	C4	H42	15.9	300.0
H32	C3	C2	H21	34.7	299.9
H32	C3	C2	H22	285.2	180.0
C2	C3	H32	C4	129.8	120.1
C2	C3	H32	H31	244.9	240.1
C4	C3	H32	H31	115.1	119.9
H32	C3	C4	C5	31.7	300.1
H32	C3	C4	H41	157.0	60.0
H32	C3	C4	H42	266.4	180.0
C5	C4	C3	H31	141.1	60.1
C5	C4	C3	H32	31.7	300.1
C3	C4	C5	H41	125.3	119.9
C3	C4	C5	H42	234.7	239.9
H41	C4	C5	H42	109.4	120.0
C6	C5	C4	H51	234.8	240.0
C6	C5	C4	H52	125.3	120.1
C4	C5	C6	S6	325.8	59.9
C4	C5	C6	C7	89.8	180.0
C4	C5	C6	H6	206.9	300.0
H51	C5	C4	H52	250.5	240.1
H41	C4	C3	H31	266.4	180.0
H41	C4	C3	H32	157.0	60.0
C3	C4	H41	C5	226.0	240.0
C3	C4	H41	H42	113.0	120.0
C5	C4	H41	H42	247.0	240.0
H41	C4	C5	C6	105.8	60.0
H41	C4	C5	H51	231.0	180.0
H41	C4	C5	H52	340.6	299.9
H42	C4	C3	H31	15.9	300.0
H42	C4	C3	H32	266.4	180.0
C3	C4	H42	C5	134.0	120.1
C3	C4	H42	H41	247.0	240.1
C5	C4	H42	H41	113.0	119.9
H42	C4	C5	C6	356.4	300.1
H42	C4	C5	H51	121.6	60.0
H42	C4	C5	H52	231.1	180.0
C6	C5	C4	H41	105.8	60.0
C6	C5	C4	H42	356.4	300.1
C4	C5	C6	H51	125.2	119.9
C4	C5	C6	H52	234.7	239.9
H51	C5	C6	H52	109.5	119.9
S6	C6	C5	C7	236.0	240.0
S6	C6	C5	H6	118.9	120.0
C5	C6	S6	HS6	180.0	60.0
C7	C6	C5	H6	243.0	240.0
C5	C6	C7	C8	187.1	180.0
C5	C6	C7	H71	312.3	300.0
C5	C6	C7	H72	61.9	59.9
H51	C5	C4	H41	231.0	180.0
H51	C5	C4	H42	121.6	60.0
C4	C5	H51	C6	232.5	240.0
C4	C5	H51	H52	116.3	120.0
C6	C5	H51	H52	243.8	240.0
H51	C5	C6	S6	200.6	300.0
H51	C5	C6	C7	324.6	60.0
H51	C5	C6	H6	81.6	180.0
H52	C5	C4	H41	340.6	299.9
H52	C5	C4	H42	231.1	180.0
C4	C5	H52	C6	127.5	120.1
C4	C5	H52	H51	243.7	240.1
C6	C5	H52	H51	116.2	120.0
H52	C5	C6	S6	91.1	180.0
H52	C5	C6	C7	215.1	300.1
H52	C5	C6	H6	332.1	60.1
S6	C6	C5	H51	200.6	300.0
S6	C6	C5	H52	91.1	180.0
C5	C6	S6	C7	126.8	120.1
C5	C6	S6	H6	244.3	240.0
C7	C6	S6	H6	117.5	120.0
S6	C6	C7	C8	312.5	300.1
S6	C6	C7	H71	77.7	60.0
S6	C6	C7	H72	187.3	180.0
C7	C6	C5	H51	324.6	60.0
C7	C6	C5	H52	215.1	300.1
C5	C6	C7	S6	234.6	239.9
C5	C6	C7	H6	115.4	120.0
S6	C6	C7	H6	240.8	240.0
C7	C6	S6	HS6	53.2	300.0
C8	C7	C6	H71	234.8	240.0
C8	C7	C6	H72	125.2	120.1
C6	C7	C8	S8	197.7	180.0
C6	C7	C8	H81	323.0	300.0
C6	C7	C8	H82	72.4	60.0
H71	C7	C6	H72	250.5	240.1
H6	C6	C5	H51	81.6	180.0
H6	C6	C5	H52	332.1	60.1
C5	C6	H6	S6	120.0	120.0
C5	C6	H6	C7	238.5	240.0
S6	C6	H6	C7	118.5	120.0
H6	C6	S6	HS6	295.7	180.0
H6	C6	C7	C8	71.7	60.0
H6	C6	C7	H71	196.9	180.0
H6	C6	C7	H72	306.4	299.9
HS6	S6	C6	C7	53.2	300.0
HS6	S6	C6	H6	295.7	180.0
C8	C7	C6	H6	71.7	60.0
C6	C7	C8	H71	125.2	120.0
C6	C7	C8	H72	234.7	239.9
H71	C7	C8	H72	109.5	120.0
S8	C8	C7	H81	234.7	240.0
S8	C8	C7	H82	125.3	120.0
C7	C8	S8	HS8	180.0	180.0
H81	C8	C7	H82	250.6	240.0
H71	C7	C6	H6	196.9	180.0
C6	C7	H71	C8	235.9	240.0
C6	C7	H71	H72	118.0	120.0
C8	C7	H71	H72	242.1	240.0
H71	C7	C8	S8	72.5	60.0
H71	C7	C8	H81	197.8	180.0
H71	C7	C8	H82	307.2	300.0
H72	C7	C6	H6	306.4	299.9
C6	C7	H72	C8	124.1	120.1
C6	C7	H72	H71	242.0	240.1
C8	C7	H72	H71	117.9	120.0
H72	C7	C8	S8	323.0	300.1
H72	C7	C8	H81	88.3	60.0
H72	C7	C8	H82	197.7	180.0
S8	C8	C7	H71	72.5	60.0
S8	C8	C7	H72	323.0	300.1
C7	C8	S8	H81	125.3	120.0
C7	C8	S8	H82	234.7	240.0
H81	C8	S8	H82	109.4	120.0
H81	C8	C7	H71	197.8	180.0
H81	C8	C7	H72	88.3	60.0
C7	C8	H81	S8	233.1	240.0
C7	C8	H81	H82	116.5	120.0
S8	C8	H81	H82	243.5	240.0
H81	C8	S8	HS8	54.7	60.1
H82	C8	C7	H71	307.2	300.0
H82	C8	C7	H72	197.7	180.0
C7	C8	H82	S8	126.9	120.0
C7	C8	H82	H81	243.5	240.0
S8	C8	H82	H81	116.5	120.0
H82	C8	S8	HS8	305.3	300.1
HS8	S8	C8	H81	54.7	60.1
HS8	S8	C8	H82	305.3	300.1