PDB Chemical Component LOV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LOV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CD1 C1G 1.514 1.529
CD1 HD11 1.100 1.090
CD1 HD12 1.100 1.090
CD1 HD13 1.100 1.089
CD2 C1G 1.518 1.530
CD2 HD21 1.100 1.090
CD2 HD22 1.100 1.090
CD2 HD23 1.100 1.090
C1G C1B 1.535 1.531
C1G H1G 1.100 1.090
C1B CA 1.531 1.530
C1B H1B1 1.100 1.090
C1B H1B2 1.099 1.090
CA CS 1.545 1.531
CA N 1.497 1.469
CA HA 1.100 1.090
CS OS 1.400 1.429
CS CT 1.554 1.530
CS HS1 1.100 1.089
N H 1.000 1.010
N H2 1.000 1.008
OS HOS 0.951 0.967
CT C1 1.528 1.530
CT HT1 1.100 1.090
CT HT2 1.100 1.090
C1 CB 1.537 1.529
C1 C 1.512 1.507
C1 H1 1.099 1.090
CB CG1 1.559 1.530
CB CG2 1.520 1.531
CB HB 1.100 1.090
CG1 HG11 1.100 1.090
CG1 HG12 1.100 1.090
CG1 HG13 1.100 1.090
CG2 HG21 1.100 1.090
CG2 HG22 1.100 1.089
CG2 HG23 1.100 1.090
C O 1.235 1.208
C OXT 1.309 1.343
OXT HXT 0.950 0.966

Bond Angles for LOV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1G CD1 HD11 109.5 109.5
C1G CD1 HD12 109.4 109.5
C1G CD1 HD13 109.5 109.5
CD1 C1G CD2 113.6 109.5
CD1 C1G C1B 115.0 109.5
CD1 C1G H1G 102.2 109.5
HD11 CD1 HD12 109.5 109.5
HD11 CD1 HD13 109.4 109.4
HD12 CD1 HD13 109.5 109.5
C1G CD2 HD21 109.5 109.5
C1G CD2 HD22 109.5 109.5
C1G CD2 HD23 109.5 109.5
CD2 C1G C1B 108.9 109.4
CD2 C1G H1G 109.2 109.4
HD21 CD2 HD22 109.5 109.5
HD21 CD2 HD23 109.4 109.4
HD22 CD2 HD23 109.5 109.4
C1B C1G H1G 107.5 109.4
C1G C1B CA 115.4 109.5
C1G C1B H1B1 107.6 109.4
C1G C1B H1B2 107.5 109.5
CA C1B H1B1 107.5 109.5
CA C1B H1B2 107.5 109.5
C1B CA CS 113.1 109.5
C1B CA N 108.8 109.5
C1B CA HA 107.1 109.5
H1B1 C1B H1B2 111.3 109.5
CS CA N 108.5 109.5
CS CA HA 107.5 109.5
CA CS OS 110.7 109.4
CA CS CT 109.6 109.4
CA CS HS1 108.5 109.5
N CA HA 111.9 109.5
CA N H 109.5 111.0
CA N H2 109.5 111.0
OS CS CT 109.1 109.4
OS CS HS1 108.9 109.5
CS OS HOS 109.5 114.0
CT CS HS1 110.0 109.5
CS CT C1 111.5 109.4
CS CT HT1 108.8 109.5
CS CT HT2 108.8 109.5
H N H2 109.4 111.0
C1 CT HT1 108.8 109.5
C1 CT HT2 108.8 109.4
CT C1 CB 111.8 109.5
CT C1 C 109.6 109.5
CT C1 H1 107.7 109.4
HT1 CT HT2 110.1 109.5
CB C1 C 109.2 109.4
CB C1 H1 108.1 109.5
C1 CB CG1 111.4 109.5
C1 CB CG2 111.9 109.5
C1 CB HB 105.9 109.5
C C1 H1 110.4 109.5
C1 C O 121.6 120.0
C1 C OXT 114.1 120.0
CG1 CB CG2 107.8 109.5
CG1 CB HB 110.2 109.5
CB CG1 HG11 109.5 109.5
CB CG1 HG12 109.5 109.5
CB CG1 HG13 109.4 109.5
CG2 CB HB 109.7 109.4
CB CG2 HG21 109.5 109.4
CB CG2 HG22 109.5 109.5
CB CG2 HG23 109.5 109.5
HG11 CG1 HG12 109.5 109.5
HG11 CG1 HG13 109.5 109.4
HG12 CG1 HG13 109.5 109.4
HG21 CG2 HG22 109.4 109.5
HG21 CG2 HG23 109.5 109.4
HG22 CG2 HG23 109.5 109.5
O C OXT 124.3 120.0
C OXT HXT 109.5 117.0

Torsion Angles for LOV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HD11 CD1 C1G HD12 240.0 240.0
HD11 CD1 C1G HD13 120.0 119.9
HD12 CD1 C1G HD13 240.0 239.9
CD1 C1G CD2 HD21 180.0 59.9
CD1 C1G CD2 HD22 300.0 180.0
CD1 C1G CD2 HD23 60.0 300.0
CD2 C1G CD1 C1B 126.4 240.0
CD2 C1G CD1 H1G 242.5 120.0
C1B C1G CD1 H1G 116.1 240.0
CD1 C1G C1B CA 302.1 175.0
CD1 C1G C1B H1B1 62.1 295.0
CD1 C1G C1B H1B2 182.1 55.0
C1G CD1 HD11 HD12 120.0 120.0
C1G CD1 HD11 HD13 240.0 240.0
HD11 CD1 C1G CD2 180.0 60.0
HD11 CD1 C1G C1B 53.6 180.0
HD11 CD1 C1G H1G 297.5 300.0
HD12 CD1 HD11 HD13 120.0 120.0
C1G CD1 HD12 HD11 240.0 240.0
C1G CD1 HD12 HD13 120.0 120.1
HD12 CD1 C1G CD2 300.0 180.0
HD12 CD1 C1G C1B 173.6 300.0
HD12 CD1 C1G H1G 57.4 60.0
HD11 CD1 HD12 HD13 240.0 240.1
C1G CD1 HD13 HD11 120.0 120.0
C1G CD1 HD13 HD12 240.0 239.9
HD13 CD1 C1G CD2 60.0 300.1
HD13 CD1 C1G C1B 293.6 60.0
HD13 CD1 C1G H1G 177.5 180.0
HD11 CD1 HD13 HD12 120.0 120.0
CD2 C1G CD1 HD11 180.0 60.0
CD2 C1G CD1 HD12 300.0 180.0
CD2 C1G CD1 HD13 60.0 300.1
CD1 C1G CD2 C1B 230.4 120.0
CD1 C1G CD2 H1G 113.3 239.9
HD21 CD2 C1G HD22 240.0 239.9
HD21 CD2 C1G HD23 120.0 119.9
HD22 CD2 C1G HD23 240.0 240.0
C1B C1G CD2 H1G 242.9 119.9
CD2 C1G C1B CA 173.3 295.0
CD2 C1G C1B H1B1 293.3 55.0
CD2 C1G C1B H1B2 53.3 175.0
C1G CD2 HD21 HD22 120.0 120.1
C1G CD2 HD21 HD23 240.0 240.0
HD21 CD2 C1G C1B 309.6 299.9
HD21 CD2 C1G H1G 66.7 180.0
HD22 CD2 HD21 HD23 120.0 119.9
C1G CD2 HD22 HD21 240.0 239.9
C1G CD2 HD22 HD23 120.0 120.0
HD22 CD2 C1G C1B 69.6 60.0
HD22 CD2 C1G H1G 186.7 300.1
HD21 CD2 HD22 HD23 240.0 240.1
C1G CD2 HD23 HD21 120.0 120.0
C1G CD2 HD23 HD22 240.0 240.0
HD23 CD2 C1G C1B 189.6 180.0
HD23 CD2 C1G H1G 306.7 60.1
HD21 CD2 HD23 HD22 120.0 120.0
C1B C1G CD1 HD11 53.6 180.0
C1B C1G CD1 HD12 173.6 300.0
C1B C1G CD1 HD13 293.6 60.0
CD1 C1G C1B CD2 128.8 240.0
CD1 C1G C1B H1G 246.9 120.1
C1B C1G CD2 HD21 309.6 299.9
C1B C1G CD2 HD22 69.6 60.0
C1B C1G CD2 HD23 189.6 180.0
CD2 C1G C1B H1G 118.2 240.1
CA C1B C1G H1B1 240.0 240.0
CA C1B C1G H1B2 120.0 120.0
C1G C1B CA CS 169.5 175.0
C1G C1B CA N 290.2 295.0
C1G C1B CA HA 51.3 55.0
H1B1 C1B C1G H1B2 240.0 240.0
H1G C1G CD1 HD11 297.5 300.0
H1G C1G CD1 HD12 57.4 60.0
H1G C1G CD1 HD13 177.5 180.0
CD1 C1G H1G CD2 239.5 120.1
CD1 C1G H1G C1B 121.5 240.0
H1G C1G CD2 HD21 66.7 180.0
H1G C1G CD2 HD22 186.7 300.1
H1G C1G CD2 HD23 306.7 60.1
CD2 C1G H1G C1B 242.0 119.9
H1G C1G C1B CA 55.1 54.9
H1G C1G C1B H1B1 175.2 175.0
H1G C1G C1B H1B2 295.1 294.9
CA C1B C1G H1G 55.1 54.9
C1G C1B CA H1B1 120.0 120.0
C1G C1B CA H1B2 240.0 240.0
H1B1 C1B CA H1B2 120.0 120.0
CS CA C1B N 239.3 240.0
CS CA C1B HA 118.2 120.0
C1B CA CS OS 54.1 60.0
C1B CA CS CT 174.6 180.0
C1B CA CS HS1 294.7 300.0
N CA C1B HA 238.9 240.0
C1B CA N H 180.0 300.0
C1B CA N H2 300.0 64.0
H1B1 C1B C1G H1G 175.2 175.0
C1G C1B H1B1 CA 235.1 240.0
C1G C1B H1B1 H1B2 117.6 120.0
CA C1B H1B1 H1B2 242.4 239.9
H1B1 C1B CA CS 49.5 55.0
H1B1 C1B CA N 170.2 175.1
H1B1 C1B CA HA 291.3 295.1
H1B2 C1B C1G H1G 295.1 294.9
C1G C1B H1B2 CA 124.9 120.0
C1G C1B H1B2 H1B1 242.4 240.1
CA C1B H1B2 H1B1 117.5 120.1
H1B2 C1B CA CS 289.5 295.0
H1B2 C1B CA N 50.2 55.0
H1B2 C1B CA HA 171.3 175.0
CS CA C1B H1B1 49.5 55.0
CS CA C1B H1B2 289.5 295.0
C1B CA CS N 120.9 120.0
C1B CA CS HA 242.0 240.0
N CA CS HA 121.1 120.0
CS CA N H 303.5 60.0
CS CA N H2 63.5 184.0
OS CS CA CT 239.6 240.1
OS CS CA HS1 119.4 120.0
CA CS OS HOS 180.0 59.9
CT CS CA HS1 239.9 240.0
CA CS CT C1 149.9 175.0
CA CS CT HT1 269.9 295.0
CA CS CT HT2 29.9 55.1
N CA C1B H1B1 170.2 175.1
N CA C1B H1B2 50.2 55.0
C1B CA N CS 236.5 240.0
C1B CA N HA 118.1 120.0
CS CA N HA 241.6 240.0
N CA CS OS 293.3 300.0
N CA CS CT 53.7 60.0
N CA CS HS1 173.8 180.0
H N CA H2 240.0 236.0
HA CA C1B H1B1 291.3 295.1
HA CA C1B H1B2 171.3 175.0
C1B CA HA CS 121.8 120.0
C1B CA HA N 240.8 240.0
CS CA HA N 119.0 120.0
HA CA CS OS 172.1 180.0
HA CA CS CT 292.6 299.9
HA CA CS HS1 52.7 60.0
HA CA N H 61.9 180.0
HA CA N H2 181.9 304.0
OS CS CA N 293.3 300.0
OS CS CA HA 172.1 180.0
CA CS OS CT 120.7 119.9
CA CS OS HS1 240.8 240.0
CT CS OS HS1 120.1 120.0
OS CS CT C1 271.2 294.9
OS CS CT HT1 31.2 54.9
OS CS CT HT2 151.2 175.0
CT CS CA N 53.7 60.0
CT CS CA HA 292.6 299.9
CA CS CT OS 238.6 240.1
CA CS CT HS1 119.2 120.0
OS CS CT HS1 240.6 240.0
CT CS OS HOS 59.3 300.0
C1 CT CS HT1 240.0 240.0
C1 CT CS HT2 120.0 119.9
CS CT C1 CB 158.8 175.0
CS CT C1 C 280.0 295.0
CS CT C1 H1 40.1 55.0
HT1 CT CS HT2 240.0 239.9
HS1 CS CA N 173.8 180.0
HS1 CS CA HA 52.7 60.0
CA CS HS1 OS 120.5 120.0
CA CS HS1 CT 240.1 240.0
OS CS HS1 CT 119.6 120.0
HS1 CS OS HOS 299.2 180.0
HS1 CS CT C1 30.7 55.0
HS1 CS CT HT1 150.7 175.0
HS1 CS CT HT2 270.7 295.1
H N CA HA 61.9 180.0
CA N H H2 120.0 124.0
H2 N CA HA 181.9 304.0
CA N H2 H 240.0 236.0
HOS OS CS CT 59.3 300.0
HOS OS CS HS1 299.2 180.0
C1 CT CS HS1 30.7 55.0
CS CT C1 HT1 120.0 120.0
CS CT C1 HT2 240.0 240.1
HT1 CT C1 HT2 120.0 120.0
CB C1 CT C 238.7 240.0
CB C1 CT H1 118.6 120.0
CT C1 CB CG1 47.4 180.0
CT C1 CB CG2 286.6 300.0
CT C1 CB HB 167.2 60.0
C C1 CT H1 239.9 240.0
CT C1 C O 326.7 0.0
CT C1 C OXT 148.0 180.0
HT1 CT CS HS1 150.7 175.0
CS CT HT1 C1 238.3 240.0
CS CT HT1 HT2 119.2 120.1
C1 CT HT1 HT2 240.9 240.0
HT1 CT C1 CB 38.7 55.0
HT1 CT C1 C 160.0 175.0
HT1 CT C1 H1 280.1 295.0
HT2 CT CS HS1 270.7 295.1
CS CT HT2 C1 121.7 119.9
CS CT HT2 HT1 240.8 239.9
C1 CT HT2 HT1 119.1 120.0
HT2 CT C1 CB 278.8 295.0
HT2 CT C1 C 40.0 55.0
HT2 CT C1 H1 160.1 175.0
CB C1 CT HT1 38.7 55.0
CB C1 CT HT2 278.8 295.0
CT C1 CB C 121.5 120.0
CT C1 CB H1 241.6 240.0
C C1 CB H1 120.1 120.0
CB C1 C O 89.5 120.0
CB C1 C OXT 270.8 300.0
CG1 CB C1 CG2 120.7 240.0
CG1 CB C1 HB 240.2 120.0
C1 CB CG1 HG11 180.0 60.0
C1 CB CG1 HG12 300.0 180.0
C1 CB CG1 HG13 60.0 300.0
CG2 CB C1 HB 119.5 240.0
C1 CB CG2 HG21 180.0 300.0
C1 CB CG2 HG22 300.0 60.0
C1 CB CG2 HG23 60.0 180.0
C C1 CT HT1 160.0 175.0
C C1 CT HT2 40.0 55.0
CT C1 C CB 237.1 240.0
CT C1 C H1 118.4 120.0
CB C1 C H1 241.3 240.0
C C1 CB CG1 285.9 60.0
C C1 CB CG2 165.1 180.0
C C1 CB HB 45.7 300.0
O C C1 OXT 178.7 180.1
C1 C OXT HXT 178.6 180.0
H1 C1 CT HT1 280.1 295.0
H1 C1 CT HT2 160.1 175.0
CT C1 H1 CB 121.0 120.0
CT C1 H1 C 240.4 240.0
CB C1 H1 C 119.4 120.0
H1 C1 CB CG1 165.7 300.0
H1 C1 CB CG2 45.0 60.0
H1 C1 CB HB 285.5 180.0
H1 C1 C O 208.2 240.1
H1 C1 C OXT 29.6 60.0
CG1 CB C1 C 285.9 60.0
CG1 CB C1 H1 165.7 300.0
C1 CB CG1 CG2 236.9 120.0
C1 CB CG1 HB 117.2 240.0
CG2 CB CG1 HB 240.4 119.9
CG1 CB CG2 HG21 57.2 60.0
CG1 CB CG2 HG22 177.1 180.0
CG1 CB CG2 HG23 297.2 300.1
HG11 CG1 CB HG12 240.0 240.0
HG11 CG1 CB HG13 120.0 120.0
HG12 CG1 CB HG13 240.0 240.0
CG2 CB C1 C 165.1 180.0
CG2 CB C1 H1 45.0 60.0
C1 CB CG2 CG1 122.8 240.0
C1 CB CG2 HB 242.8 120.0
CG1 CB CG2 HB 119.9 240.0
CG2 CB CG1 HG11 303.1 299.9
CG2 CB CG1 HG12 63.2 60.0
CG2 CB CG1 HG13 183.2 180.0
HG21 CG2 CB HG22 240.1 240.0
HG21 CG2 CB HG23 120.0 119.9
HG22 CG2 CB HG23 240.0 240.0
HB CB C1 C 45.7 300.0
HB CB C1 H1 285.5 180.0
C1 CB HB CG1 239.4 120.1
C1 CB HB CG2 120.9 240.0
CG1 CB HB CG2 241.5 120.0
HB CB CG1 HG11 62.7 180.0
HB CB CG1 HG12 182.8 300.0
HB CB CG1 HG13 302.8 60.0
HB CB CG2 HG21 297.3 179.9
HB CB CG2 HG22 57.2 300.0
HB CB CG2 HG23 177.2 60.0
HG11 CG1 CB CG2 303.1 299.9
HG11 CG1 CB HB 62.7 180.0
CB CG1 HG11 HG12 120.0 120.1
CB CG1 HG11 HG13 240.0 240.0
HG12 CG1 HG11 HG13 120.0 120.0
HG12 CG1 CB CG2 63.2 60.0
HG12 CG1 CB HB 182.8 300.0
CB CG1 HG12 HG11 240.0 240.0
CB CG1 HG12 HG13 120.0 120.0
HG11 CG1 HG12 HG13 240.0 240.0
HG13 CG1 CB CG2 183.2 180.0
HG13 CG1 CB HB 302.8 60.0
CB CG1 HG13 HG11 120.0 120.0
CB CG1 HG13 HG12 240.0 239.9
HG11 CG1 HG13 HG12 120.0 120.0
HG21 CG2 CB HB 297.3 179.9
CB CG2 HG21 HG22 120.0 120.0
CB CG2 HG21 HG23 240.0 240.1
HG22 CG2 HG21 HG23 120.0 120.1
HG22 CG2 CB HB 57.2 300.0
CB CG2 HG22 HG21 240.0 240.0
CB CG2 HG22 HG23 120.0 120.0
HG21 CG2 HG22 HG23 240.0 240.0
HG23 CG2 CB HB 177.2 60.0
CB CG2 HG23 HG21 120.1 119.9
CB CG2 HG23 HG22 240.0 240.0
HG21 CG2 HG23 HG22 119.9 120.1
O C C1 H1 208.2 240.1
C1 C O OXT 181.5 179.9
O C OXT HXT 360.0 359.9
OXT C C1 H1 29.6 60.0
C1 C OXT O 178.6 180.1