PDB Chemical Component LOR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LOR
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CL |
C6 |
1.691 |
1.803 |
O1 |
C1 |
1.236 |
1.208 |
C1 |
C2 |
1.511 |
1.508 |
C1 |
H1 |
1.080 |
1.080 |
C3 |
C2 |
1.532 |
1.530 |
C2 |
N2 |
1.503 |
1.465 |
C2 |
H2 |
1.100 |
1.089 |
N2 |
C21 |
1.359 |
1.347 |
N2 |
HN2 |
1.001 |
0.970 |
N8 |
C3 |
1.485 |
1.457 |
C3 |
C4 |
1.505 |
1.529 |
C3 |
H3 |
1.100 |
1.090 |
C5 |
C4 |
1.501 |
1.534 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H4A |
1.100 |
1.090 |
C6 |
C5 |
1.700 |
1.531 |
C5 |
H5 |
1.100 |
1.091 |
C5 |
H5A |
1.100 |
1.090 |
C7 |
C6 |
1.555 |
1.501 |
C6 |
H6 |
1.100 |
1.090 |
C8 |
C7 |
1.459 |
1.482 |
C7 |
N8 |
1.445 |
1.262 |
O81 |
C8 |
1.260 |
1.215 |
C8 |
O82 |
1.552 |
1.347 |
C21 |
C22 |
1.549 |
1.507 |
C21 |
O21 |
1.263 |
1.213 |
C23 |
C22 |
1.504 |
1.507 |
C22 |
N22 |
1.388 |
1.469 |
C22 |
H22 |
1.100 |
1.089 |
N22 |
HN22 |
1.000 |
1.010 |
N22 |
HN2A |
1.000 |
1.009 |
C24 |
C23 |
1.454 |
1.383 |
C23 |
C28 |
1.430 |
1.383 |
C25 |
C24 |
1.399 |
1.382 |
C24 |
H24 |
1.080 |
1.079 |
C25 |
C26 |
1.467 |
1.383 |
C25 |
H25 |
1.080 |
1.080 |
C26 |
C27 |
1.450 |
1.382 |
C26 |
H26 |
1.080 |
1.080 |
C27 |
C28 |
1.432 |
1.382 |
C27 |
H27 |
1.081 |
1.080 |
C28 |
H28 |
1.080 |
1.080 |
O82 |
HO82 |
0.951 |
0.967 |
Bond Angles for LOR
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CL |
C6 |
C5 |
120.7 |
109.4 |
CL |
C6 |
H6 |
20.0 |
109.4 |
O1 |
C1 |
C2 |
119.8 |
120.0 |
O1 |
C1 |
H1 |
120.1 |
120.0 |
C2 |
C1 |
H1 |
120.1 |
120.0 |
C1 |
C2 |
N2 |
108.1 |
109.5 |
C1 |
C2 |
H2 |
112.2 |
109.5 |
C3 |
C2 |
H2 |
108.5 |
109.5 |
N2 |
C2 |
H2 |
108.3 |
109.5 |
C2 |
N2 |
C21 |
122.6 |
120.0 |
C2 |
N2 |
HN2 |
118.7 |
120.0 |
C21 |
N2 |
HN2 |
118.7 |
120.0 |
N2 |
C21 |
C22 |
119.1 |
120.0 |
N2 |
C21 |
O21 |
121.5 |
120.0 |
N8 |
C3 |
H3 |
103.4 |
109.2 |
C4 |
C3 |
H3 |
106.8 |
109.3 |
C3 |
C4 |
H4 |
108.5 |
109.7 |
C3 |
C4 |
H4A |
108.5 |
109.6 |
C5 |
C4 |
H4 |
108.5 |
109.7 |
C5 |
C4 |
H4A |
108.5 |
109.7 |
H4 |
C4 |
H4A |
110.4 |
109.7 |
C6 |
C5 |
H5 |
108.8 |
109.7 |
C6 |
C5 |
H5A |
108.8 |
109.8 |
H5 |
C5 |
H5A |
110.1 |
109.6 |
C7 |
C6 |
H6 |
103.4 |
109.3 |
C8 |
C7 |
N8 |
119.9 |
117.8 |
O81 |
C8 |
O82 |
125.1 |
120.0 |
C8 |
O82 |
HO82 |
109.5 |
117.0 |
O21 |
C21 |
C22 |
119.4 |
120.0 |
C21 |
C22 |
N22 |
110.4 |
109.5 |
C21 |
C22 |
H22 |
108.8 |
109.5 |
C23 |
C22 |
H22 |
108.9 |
109.5 |
N22 |
C22 |
H22 |
108.4 |
109.5 |
C22 |
N22 |
HN22 |
109.5 |
110.9 |
C22 |
N22 |
HN2A |
109.4 |
111.0 |
HN22 |
N22 |
HN2A |
109.5 |
111.0 |
C24 |
C23 |
C28 |
120.8 |
120.0 |
C23 |
C28 |
C27 |
119.8 |
120.0 |
C23 |
C28 |
H28 |
120.1 |
120.0 |
C25 |
C24 |
H24 |
120.0 |
120.0 |
C26 |
C25 |
H25 |
119.9 |
120.0 |
C25 |
C26 |
C27 |
119.5 |
120.0 |
C25 |
C26 |
H26 |
120.3 |
120.0 |
C27 |
C26 |
H26 |
120.2 |
120.0 |
C26 |
C27 |
C28 |
119.8 |
120.0 |
C26 |
C27 |
H27 |
120.1 |
120.0 |
C28 |
C27 |
H27 |
120.1 |
120.0 |
C27 |
C28 |
H28 |
120.1 |
120.0 |
Torsion Angles for LOR
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CL |
C6 |
C5 |
H5 |
87.7 |
48.2 |
CL |
C6 |
C5 |
H5A |
327.7 |
287.6 |
C7 |
C6 |
CL |
H6 |
344.0 |
240.3 |
C2 |
C1 |
O1 |
H1 |
180.0 |
180.2 |
O1 |
C1 |
C2 |
N2 |
303.7 |
359.8 |
O1 |
C1 |
C2 |
H2 |
184.3 |
239.7 |
O1 |
C1 |
C2 |
H1 |
180.0 |
179.8 |
C3 |
C2 |
C1 |
H2 |
240.5 |
240.0 |
N2 |
C2 |
C1 |
H2 |
119.4 |
120.0 |
C1 |
C2 |
N2 |
C21 |
221.1 |
275.0 |
C1 |
C2 |
N2 |
HN2 |
41.1 |
95.0 |
O1 |
C1 |
H1 |
C2 |
180.0 |
180.2 |
H1 |
C1 |
C2 |
N2 |
123.7 |
180.0 |
H1 |
C1 |
C2 |
H2 |
4.3 |
60.0 |
C3 |
C2 |
C1 |
H1 |
244.8 |
300.0 |
C1 |
C2 |
C3 |
H2 |
121.8 |
120.0 |
N2 |
C2 |
C3 |
H2 |
240.6 |
240.0 |
C3 |
C2 |
N2 |
C21 |
102.5 |
155.0 |
C3 |
C2 |
N2 |
HN2 |
282.5 |
335.0 |
N2 |
C2 |
C1 |
H1 |
123.7 |
180.0 |
C1 |
C2 |
N2 |
H2 |
238.2 |
240.0 |
C3 |
C2 |
N2 |
H2 |
119.5 |
120.0 |
C21 |
N2 |
C2 |
HN2 |
180.0 |
180.0 |
C2 |
N2 |
C21 |
C22 |
203.9 |
180.0 |
C2 |
N2 |
C21 |
O21 |
22.7 |
0.0 |
H2 |
C2 |
C1 |
H1 |
4.3 |
60.0 |
C1 |
C2 |
H2 |
N2 |
119.2 |
120.0 |
H2 |
C2 |
N2 |
C21 |
343.0 |
35.0 |
H2 |
C2 |
N2 |
HN2 |
163.0 |
215.0 |
C21 |
N2 |
C2 |
H2 |
343.0 |
35.0 |
C2 |
N2 |
C21 |
HN2 |
180.0 |
180.0 |
O21 |
C21 |
N2 |
C22 |
178.7 |
180.1 |
N2 |
C21 |
C22 |
N22 |
181.9 |
200.0 |
N2 |
C21 |
C22 |
H22 |
300.7 |
320.1 |
HN2 |
N2 |
C2 |
H2 |
163.0 |
215.0 |
C2 |
N2 |
HN2 |
C21 |
180.0 |
180.0 |
HN2 |
N2 |
C21 |
C22 |
23.9 |
359.9 |
HN2 |
N2 |
C21 |
O21 |
202.6 |
180.0 |
N8 |
C3 |
C2 |
H2 |
179.8 |
66.1 |
C4 |
C3 |
N8 |
H3 |
243.5 |
239.7 |
N8 |
C3 |
C4 |
H4 |
170.3 |
169.2 |
N8 |
C3 |
C4 |
H4A |
290.3 |
289.7 |
C4 |
C3 |
C2 |
H2 |
52.1 |
305.0 |
N8 |
C3 |
C4 |
H3 |
114.6 |
120.2 |
C5 |
C4 |
C3 |
H4 |
240.0 |
240.2 |
C5 |
C4 |
C3 |
H4A |
120.0 |
119.7 |
H4 |
C4 |
C3 |
H4A |
240.0 |
239.5 |
H3 |
C3 |
C2 |
H2 |
294.8 |
185.5 |
H3 |
C3 |
C4 |
H4 |
55.7 |
49.0 |
H3 |
C3 |
C4 |
H4A |
175.7 |
169.4 |
CL |
C6 |
C5 |
C4 |
207.7 |
167.8 |
C5 |
C4 |
C3 |
H3 |
295.7 |
289.2 |
C3 |
C4 |
C5 |
H4 |
120.0 |
119.8 |
C3 |
C4 |
C5 |
H4A |
240.0 |
240.3 |
H4 |
C4 |
C5 |
H4A |
120.0 |
120.5 |
H4 |
C4 |
C3 |
H3 |
55.7 |
49.0 |
C3 |
C4 |
H4 |
H4A |
118.8 |
120.4 |
C5 |
C4 |
H4 |
H4A |
241.2 |
239.4 |
H4A |
C4 |
C3 |
H3 |
175.7 |
169.4 |
C3 |
C4 |
H4A |
H4 |
241.2 |
239.5 |
C5 |
C4 |
H4A |
H4 |
118.8 |
120.6 |
CL |
C6 |
C5 |
H6 |
351.8 |
240.2 |
C6 |
C5 |
C4 |
H4 |
188.1 |
174.5 |
C6 |
C5 |
C4 |
H4A |
68.1 |
54.0 |
H5 |
C5 |
C6 |
H5A |
120.0 |
120.6 |
H5 |
C5 |
C4 |
H4 |
308.1 |
294.2 |
H5 |
C5 |
C4 |
H4A |
188.1 |
173.7 |
C6 |
C5 |
H5 |
H5A |
240.8 |
239.3 |
H5A |
C5 |
C4 |
H4 |
68.1 |
54.7 |
H5A |
C5 |
C4 |
H4A |
308.1 |
294.2 |
C6 |
C5 |
H5A |
H5 |
119.2 |
120.7 |
CL |
C6 |
C7 |
H6 |
5.5 |
119.7 |
C7 |
C6 |
C5 |
H5 |
268.1 |
288.0 |
C7 |
C6 |
C5 |
H5A |
148.1 |
167.4 |
CL |
C6 |
H6 |
C5 |
21.0 |
119.8 |
H6 |
C6 |
C5 |
H5 |
95.9 |
168.0 |
H6 |
C6 |
C5 |
H5A |
335.9 |
47.4 |
C8 |
C7 |
C6 |
H6 |
354.2 |
283.8 |
C7 |
N8 |
C3 |
H3 |
95.2 |
102.5 |
N8 |
C7 |
C6 |
H6 |
174.4 |
103.7 |
O81 |
C8 |
O82 |
HO82 |
360.0 |
360.0 |
O82 |
C8 |
C7 |
N8 |
224.5 |
0.1 |
C22 |
C21 |
N2 |
HN2 |
23.9 |
359.9 |
N2 |
C21 |
C22 |
O21 |
178.7 |
180.1 |
C23 |
C22 |
C21 |
H22 |
119.2 |
120.0 |
N22 |
C22 |
C21 |
H22 |
241.1 |
239.9 |
C21 |
C22 |
N22 |
HN22 |
180.0 |
176.1 |
C21 |
C22 |
N22 |
HN2A |
300.0 |
300.0 |
O21 |
C21 |
N2 |
HN2 |
202.6 |
180.0 |
N2 |
C21 |
O21 |
C22 |
181.3 |
179.9 |
O21 |
C21 |
C22 |
N22 |
3.1 |
19.9 |
O21 |
C21 |
C22 |
H22 |
122.0 |
140.0 |
C21 |
C22 |
C23 |
H22 |
240.9 |
240.0 |
N22 |
C22 |
C23 |
H22 |
118.9 |
120.1 |
C23 |
C22 |
N22 |
HN22 |
301.8 |
296.0 |
C23 |
C22 |
N22 |
HN2A |
61.8 |
59.9 |
C21 |
C22 |
N22 |
H22 |
119.1 |
120.0 |
C23 |
C22 |
N22 |
H22 |
240.9 |
240.0 |
HN22 |
N22 |
C22 |
HN2A |
240.0 |
236.1 |
C21 |
C22 |
H22 |
N22 |
239.9 |
240.0 |
H22 |
C22 |
N22 |
HN22 |
60.9 |
56.0 |
H22 |
C22 |
N22 |
HN2A |
181.0 |
179.9 |
HN22 |
N22 |
C22 |
H22 |
60.9 |
56.0 |
C22 |
N22 |
HN22 |
HN2A |
120.0 |
123.9 |
HN2A |
N22 |
C22 |
H22 |
181.0 |
179.9 |
C22 |
N22 |
HN2A |
HN22 |
240.0 |
236.1 |
C24 |
C23 |
C22 |
H22 |
23.6 |
200.3 |
C24 |
C23 |
C28 |
C27 |
0.1 |
359.4 |
C24 |
C23 |
C28 |
H28 |
180.1 |
179.7 |
C28 |
C23 |
C22 |
H22 |
202.9 |
19.9 |
C26 |
C27 |
C28 |
C23 |
0.0 |
0.5 |
C23 |
C28 |
C27 |
H27 |
180.0 |
180.3 |
C27 |
C28 |
C23 |
H28 |
180.0 |
179.7 |
C25 |
C24 |
C23 |
C28 |
360.0 |
0.3 |
H24 |
C24 |
C23 |
C28 |
180.0 |
180.3 |
C26 |
C25 |
C24 |
H24 |
180.0 |
180.0 |
C27 |
C26 |
C25 |
H26 |
180.0 |
180.0 |
C25 |
C26 |
C27 |
C28 |
359.9 |
359.8 |
C25 |
C26 |
C27 |
H27 |
179.9 |
180.0 |
H25 |
C25 |
C24 |
H24 |
360.0 |
359.9 |
H25 |
C25 |
C26 |
C27 |
180.1 |
180.0 |
H25 |
C25 |
C26 |
H26 |
0.1 |
0.0 |
C23 |
C28 |
C27 |
C26 |
0.0 |
0.5 |
C27 |
C26 |
C25 |
H25 |
180.1 |
180.0 |
C25 |
C26 |
C27 |
H26 |
180.0 |
180.0 |
C28 |
C27 |
C26 |
H27 |
180.0 |
179.8 |
C26 |
C27 |
C28 |
H28 |
180.0 |
180.2 |
H26 |
C26 |
C25 |
H25 |
0.1 |
0.0 |
C25 |
C26 |
H26 |
C27 |
180.0 |
180.0 |
H26 |
C26 |
C27 |
C28 |
179.9 |
179.8 |
H26 |
C26 |
C27 |
H27 |
359.9 |
360.0 |
C23 |
C28 |
C27 |
H28 |
180.0 |
180.3 |
C28 |
C27 |
C26 |
H26 |
179.9 |
179.8 |
C26 |
C27 |
C28 |
H27 |
180.0 |
180.2 |
H27 |
C27 |
C26 |
H26 |
359.9 |
360.0 |
C26 |
C27 |
H27 |
C28 |
180.0 |
179.8 |
H27 |
C27 |
C28 |
H28 |
0.0 |
0.0 |
C23 |
C28 |
H28 |
C27 |
180.0 |
179.7 |
H28 |
C28 |
C27 |
H27 |
0.0 |
0.0 |