PDB Chemical Component LOC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LOC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O4 C12 1.211 1.212
C12 C13 1.494 1.507
C12 N1 1.330 1.348
N1 C11 1.463 1.465
C11 C14 1.491 1.515
C11 C10 1.527 1.516
C14 C15 1.394 1.344
C14 C21 1.367 1.396
C15 C16 1.522 1.367
C10 C9 1.535 1.526
C9 C8 1.507 1.507
C8 C7 1.383 1.379
C8 C22 1.449 1.391
C7 C5 1.401 1.390
C5 C3 1.388 1.391
C5 O3 1.388 1.359
C3 C1 1.396 1.389
C3 O2 1.385 1.360
C1 O1 1.354 1.359
C1 C22 1.387 1.398
O1 C2 1.434 1.429
O2 C4 1.434 1.429
O3 C6 1.427 1.429
C22 C21 1.500 1.493
C21 C20 1.225 1.371
C20 C19 1.149 1.347
C19 C17 1.216 1.360
C17 C16 1.467 1.391
C17 O6 1.431 1.355
C16 O5 1.219 1.223
O6 C18 1.415 1.428
C13 H13 1.100 1.090
C13 H13A 1.100 1.090
C13 H13B 1.100 1.089
N1 HN1 1.000 0.970
C11 H11 1.100 1.090
C15 H15 1.080 1.080
C10 H10 1.100 1.091
C10 H10A 1.100 1.090
C9 H9 1.100 1.089
C9 H9A 1.100 1.090
C7 H7 1.080 1.081
C2 H2 1.100 1.090
C2 H2A 1.100 1.089
C2 H2B 1.100 1.090
C4 H4 1.100 1.089
C4 H4A 1.100 1.089
C4 H4B 1.100 1.090
C6 H6 1.100 1.091
C6 H6A 1.100 1.090
C6 H6B 1.100 1.089
C20 H20 1.080 1.080
C19 H19 1.080 1.080
C18 H18 1.100 1.091
C18 H18A 1.100 1.090
C18 H18B 1.100 1.090

Bond Angles for LOC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O4 C12 C13 118.5 120.0
O4 C12 N1 127.8 120.0
C13 C12 N1 113.7 120.0
C12 C13 H13 109.5 109.5
C12 C13 H13A 109.5 109.5
C12 C13 H13B 109.5 109.5
C12 N1 C11 127.3 120.0
C12 N1 HN1 116.3 120.0
N1 C11 C14 117.1 109.0
N1 C11 C10 105.0 109.0
C11 N1 HN1 116.4 120.1
N1 C11 H11 106.5 109.0
C14 C11 C10 106.4 111.7
C11 C14 C15 117.4 116.3
C11 C14 C21 115.7 118.4
C14 C11 H11 105.1 109.1
C11 C10 C9 115.3 111.1
C10 C11 H11 117.2 108.9
C11 C10 H10 107.6 109.1
C11 C10 H10A 106.2 109.2
C15 C14 C21 126.9 125.2
C14 C15 C16 133.0 132.9
C14 C15 H15 113.4 113.6
C14 C21 C22 123.7 117.1
C14 C21 C20 110.3 126.2
C15 C16 C17 123.0 128.5
C15 C16 O5 119.2 115.8
C16 C15 H15 113.5 113.5
C10 C9 C8 111.6 109.7
C9 C10 H10 107.5 109.1
C9 C10 H10A 106.2 109.2
C10 C9 H9 108.7 109.5
C10 C9 H9A 108.3 109.4
C9 C8 C7 123.7 120.1
C9 C8 C22 118.0 119.9
C8 C9 H9 108.8 109.4
C8 C9 H9A 108.3 109.4
C7 C8 C22 118.3 120.0
C8 C7 C5 122.2 120.0
C8 C7 H7 118.9 120.0
C8 C22 C1 118.4 120.4
C8 C22 C21 114.4 120.0
C7 C5 C3 119.4 120.3
C7 C5 O3 117.2 119.8
C5 C7 H7 118.9 119.9
C3 C5 O3 123.4 119.8
C5 C3 C1 119.5 119.9
C5 C3 O2 119.6 120.0
C5 O3 C6 129.1 117.0
C1 C3 O2 120.9 120.1
C3 C1 O1 118.1 120.3
C3 C1 C22 122.2 119.4
C3 O2 C4 122.2 117.0
O1 C1 C22 119.7 120.3
C1 O1 C2 118.0 117.0
C1 C22 C21 127.3 119.6
O1 C2 H2 109.5 109.5
O1 C2 H2A 109.5 109.5
O1 C2 H2B 109.5 109.4
O2 C4 H4 109.5 109.5
O2 C4 H4A 109.4 109.5
O2 C4 H4B 109.4 109.5
O3 C6 H6 109.5 109.4
O3 C6 H6A 109.5 109.5
O3 C6 H6B 109.5 109.5
C22 C21 C20 126.0 116.7
C21 C20 C19 149.3 132.7
C21 C20 H20 105.4 113.7
C20 C19 C17 148.6 128.8
C19 C20 H20 105.4 113.6
C20 C19 H19 105.7 115.6
C19 C17 C16 108.7 125.4
C19 C17 O6 126.2 117.3
C17 C19 H19 105.7 115.6
C16 C17 O6 125.1 117.3
C17 C16 O5 117.8 115.7
C17 O6 C18 114.7 117.0
O6 C18 H18 109.5 109.5
O6 C18 H18A 109.5 109.5
O6 C18 H18B 109.5 109.5
H13 C13 H13A 109.5 109.4
H13 C13 H13B 109.5 109.5
H13A C13 H13B 109.5 109.5
H10 C10 H10A 114.2 109.1
H9 C9 H9A 111.2 109.4
H2 C2 H2A 109.5 109.5
H2 C2 H2B 109.5 109.4
H2A C2 H2B 109.5 109.5
H4 C4 H4A 109.5 109.5
H4 C4 H4B 109.4 109.4
H4A C4 H4B 109.5 109.5
H6 C6 H6A 109.5 109.5
H6 C6 H6B 109.4 109.4
H6A C6 H6B 109.5 109.5
H18 C18 H18A 109.5 109.5
H18 C18 H18B 109.5 109.4
H18A C18 H18B 109.5 109.5

Torsion Angles for LOC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C13 C12 O4 N1 180.5 180.3
O4 C12 C13 H13 198.9 360.0
O4 C12 C13 H13A 318.9 119.9
O4 C12 C13 H13B 78.9 240.0
O4 C12 N1 C11 2.6 0.1
O4 C12 N1 HN1 182.6 180.0
O4 C12 C13 N1 179.6 179.7
C13 C12 N1 C11 182.1 179.8
C13 C12 N1 HN1 2.1 359.7
H13 C13 C12 H13A 240.0 240.1
H13 C13 C12 H13B 120.0 120.0
H13A C13 C12 H13B 240.0 240.0
O4 C12 N1 C13 180.5 180.3
N1 C12 C13 H13 19.4 180.3
N1 C12 C13 H13A 139.4 300.3
N1 C12 C13 H13B 259.4 60.3
C12 N1 C11 C14 282.9 274.9
C12 N1 C11 C10 165.0 152.7
C11 N1 C12 HN1 180.0 180.1
C12 N1 C11 H11 40.1 33.9
C12 N1 C11 HN1 180.0 179.9
C14 C11 N1 C10 117.8 122.2
N1 C11 C14 C15 345.9 339.9
N1 C11 C14 C21 166.7 159.9
C14 C11 N1 H11 242.8 241.0
N1 C11 C10 C9 176.2 165.4
C10 C11 N1 H11 125.0 118.8
N1 C11 C10 H10 296.2 285.8
N1 C11 C10 H10A 58.8 44.9
N1 C11 C14 C10 242.9 239.4
C14 C11 N1 HN1 102.9 95.0
N1 C11 C14 H11 118.0 118.9
C14 C11 C10 C9 51.4 44.8
C10 C11 C14 H11 235.0 239.5
C14 C11 C10 H10 171.3 165.3
C14 C11 C10 H10A 294.0 284.4
C15 C14 C11 C21 179.2 179.9
C11 C14 C15 C16 179.0 178.6
C11 C14 C15 H15 359.0 358.6
C11 C14 C21 C22 356.7 4.9
C11 C14 C21 C20 175.9 184.7
N1 C11 C10 C14 124.9 120.6
C10 C11 N1 HN1 345.1 332.8
N1 C11 C10 H11 242.0 241.1
C10 C11 C14 C15 103.0 100.4
C10 C11 C14 C21 283.7 280.5
C14 C11 C10 H11 117.2 120.6
C11 C10 C9 C8 38.8 44.3
C9 C10 C11 H10 240.0 239.6
C9 C10 C11 H10A 117.4 120.5
C11 C10 C9 H9 158.9 164.3
C11 C10 C9 H9A 279.7 284.2
H10 C10 C11 H10A 237.4 240.9
C15 C14 C11 C10 103.0 100.4
C11 C14 C15 C21 180.9 180.1
C15 C14 C11 H11 227.9 220.9
C15 C14 C21 C22 177.6 185.0
C15 C14 C21 C20 356.8 4.8
C14 C15 C16 C17 3.9 356.3
C14 C15 C16 O5 185.3 176.3
C16 C15 C14 H15 180.0 180.1
C21 C14 C11 C10 283.7 280.5
C11 C14 C21 C15 179.2 179.9
C21 C14 C11 H11 48.7 41.0
C21 C14 C15 C16 358.1 358.6
C21 C14 C15 H15 178.1 178.5
C8 C22 C21 C14 57.2 48.7
C1 C22 C21 C14 237.6 229.3
C22 C21 C14 C20 180.8 180.2
C14 C21 C20 C19 6.6 357.6
C14 C21 C20 H20 186.6 177.6
C16 C15 C14 C21 358.1 358.6
C14 C15 C16 H15 180.0 179.9
C19 C17 C16 C15 360.0 3.6
C15 C16 C17 O6 182.0 183.6
C17 C16 C15 O5 178.6 180.0
C9 C10 C11 H11 294.2 284.3
C11 C10 C9 H10 120.0 120.4
C11 C10 C9 H10A 242.6 239.5
C10 C9 C8 C7 109.7 103.9
C10 C9 C8 C22 289.4 283.8
C8 C9 C10 H9 240.0 239.9
C8 C9 C10 H9A 119.1 120.0
H10 C10 C9 H10A 122.6 119.1
H9 C9 C10 H9A 239.1 240.1
C8 C9 C10 H10 278.8 283.8
C8 C9 C10 H10A 156.2 164.7
C10 C9 C8 H9 120.0 120.1
C10 C9 C8 H9A 240.9 240.0
C7 C8 C9 C22 180.3 180.1
C9 C8 C7 C5 179.8 179.5
C9 C8 C7 H7 359.8 359.5
C9 C8 C22 C1 180.0 180.8
C9 C8 C22 C21 0.4 1.4
H9 C9 C8 H9A 120.9 119.9
C9 C8 C7 C22 179.7 179.9
C7 C8 C9 H9 349.7 343.8
C7 C8 C9 H9A 228.8 223.9
C7 C8 C22 C1 359.7 0.7
C7 C8 C22 C21 180.1 181.4
C8 C7 C5 C3 0.1 360.0
C8 C7 C5 O3 178.9 179.9
C5 C7 C8 H7 180.0 180.0
C14 C21 C22 C8 57.2 48.7
C9 C8 C22 C7 180.3 180.1
C22 C8 C9 H9 169.4 163.7
C22 C8 C9 H9A 48.5 43.8
C22 C8 C7 C5 0.1 359.6
C22 C8 C7 H7 180.1 179.6
C3 C1 C22 C8 0.2 359.5
O1 C1 C22 C8 180.3 179.5
C1 C22 C8 C21 179.6 179.3
C8 C22 C21 C20 238.2 228.9
C5 C7 C8 C22 0.1 359.6
C8 C7 C5 H7 180.0 180.0
C3 C5 C7 O3 181.2 180.0
C7 C5 C3 C1 359.8 0.2
C7 C5 C3 O2 180.4 180.2
C7 C5 O3 C6 142.7 360.0
C7 C5 C3 O3 178.7 180.0
C3 C5 C7 H7 180.1 179.9
C3 C5 O3 C6 321.4 180.0
C1 C3 C5 O2 179.5 180.0
C5 C3 C1 O1 179.9 180.0
C5 C3 C1 C22 0.0 0.0
C5 C3 O2 C4 90.9 89.8
C7 C5 O3 C3 181.3 180.0
O3 C5 C7 H7 358.9 359.9
O3 C5 C3 C1 181.1 180.3
O3 C5 C3 O2 1.7 0.2
C5 O3 C6 H6 50.6 60.0
C5 O3 C6 H6A 170.6 180.0
C5 O3 C6 H6B 290.6 300.1
C8 C22 C1 C3 0.2 359.5
C1 C3 C5 O3 181.1 180.3
C5 C3 C1 O2 180.5 180.0
C1 C3 O2 C4 271.4 269.7
O1 C1 C3 C22 179.9 180.0
C3 C1 O1 C2 275.3 275.2
C3 C1 C22 C21 179.8 178.8
O2 C3 C5 O3 1.7 0.2
C5 C3 O2 C1 179.5 180.0
O2 C3 C1 O1 359.4 0.1
O2 C3 C1 C22 179.5 180.1
C3 O2 C4 H4 132.8 175.2
C3 O2 C4 H4A 252.8 295.3
C3 O2 C4 H4B 12.9 55.3
C8 C22 C1 O1 180.3 179.5
O1 C1 C3 O2 359.4 0.1
C3 C1 O1 C22 180.1 180.0
O1 C1 C22 C21 359.9 358.8
C1 O1 C2 H2 359.5 304.8
C1 O1 C2 H2A 119.5 64.9
C1 O1 C2 H2B 239.6 184.9
C14 C21 C22 C1 237.6 229.3
C8 C22 C1 C21 180.4 180.7
C22 C1 C3 O2 179.5 180.1
C3 C1 C22 O1 179.9 180.0
C22 C1 O1 C2 95.1 95.2
C1 C22 C21 C20 58.6 49.5
C2 O1 C1 C22 95.1 95.2
H2 C2 O1 H2A 240.0 239.9
H2 C2 O1 H2B 120.0 119.9
H2A C2 O1 H2B 240.0 240.0
H4 C4 O2 H4A 240.0 239.9
H4 C4 O2 H4B 120.0 119.9
H4A C4 O2 H4B 240.0 240.0
H6 C6 O3 H6A 240.0 240.0
H6 C6 O3 H6B 120.0 119.9
H6A C6 O3 H6B 240.0 239.9
C14 C21 C22 C20 179.0 179.8
C8 C22 C21 C1 179.6 179.3
C22 C21 C20 C19 185.8 177.4
C22 C21 C20 H20 5.8 357.4
C14 C21 C20 C22 180.8 180.2
C21 C20 C19 C17 358.9 358.5
C19 C20 C21 H20 180.0 180.0
C21 C20 C19 H19 178.9 178.5
C21 C20 C19 H20 180.0 180.0
C20 C19 C17 C16 356.2 0.4
C20 C19 C17 O6 174.2 180.4
C17 C19 C20 H19 180.0 180.0
C15 C16 C17 C19 360.0 3.6
C17 C19 C20 H20 178.9 178.5
C20 C19 C17 H19 180.0 180.0
C16 C17 C19 O6 182.1 180.0
C19 C17 C16 O5 178.6 183.6
C19 C17 O6 C18 251.6 360.0
C15 C16 C17 O5 181.4 180.0
C17 C16 C15 H15 183.9 176.3
C19 C17 C16 O6 178.0 180.0
C16 C17 C19 H19 176.2 180.4
C16 C17 O6 C18 69.2 180.0
C19 C17 O6 C16 182.4 180.0
O6 C17 C19 H19 354.1 0.5
O6 C17 C16 O5 0.6 3.5
C17 O6 C18 H18 250.9 300.0
C17 O6 C18 H18A 10.9 60.0
C17 O6 C18 H18B 130.8 180.0
C15 C16 O5 C17 178.7 180.0
O5 C16 C15 H15 5.3 356.4
O5 C16 C17 O6 0.6 3.5
H18 C18 O6 H18A 240.0 240.0
H18 C18 O6 H18B 120.0 120.0
H18A C18 O6 H18B 240.0 240.0
H13 C13 C12 N1 19.4 180.3
C12 C13 H13 H13A 120.0 120.0
C12 C13 H13 H13B 240.0 239.9
H13A C13 H13 H13B 120.0 120.0
H13A C13 C12 N1 139.4 300.3
C12 C13 H13A H13 240.0 240.0
C12 C13 H13A H13B 120.0 120.1
H13 C13 H13A H13B 240.0 240.0
H13B C13 C12 N1 259.4 60.3
C12 C13 H13B H13 120.0 120.0
C12 C13 H13B H13A 240.0 240.0
H13 C13 H13B H13A 120.0 119.9
C12 N1 HN1 C11 180.0 180.1
HN1 N1 C11 C14 102.9 95.0
HN1 N1 C11 C10 345.1 332.8
HN1 N1 C11 H11 220.1 214.0
N1 C11 H11 C14 235.1 241.1
N1 C11 H11 C10 117.2 118.9
H11 C11 N1 HN1 220.1 214.0
C14 C11 H11 C10 242.1 237.8
H11 C11 C14 C15 227.9 220.9
H11 C11 C14 C21 48.7 41.0
H11 C11 C10 C9 294.2 284.3
H11 C11 C10 H10 54.2 44.7
H11 C11 C10 H10A 176.8 163.8
H15 C15 C14 C21 178.1 178.5
C14 C15 H15 C16 180.0 180.0
H15 C15 C16 C17 183.9 176.3
H15 C15 C16 O5 5.3 356.4
C11 C10 H10 C9 235.2 238.4
H10 C10 C11 H11 54.2 44.7
C11 C10 H10 H10A 117.6 119.2
H10 C10 C9 C8 278.8 283.8
C9 C10 H10 H10A 242.4 240.8
H10 C10 C9 H9 38.9 43.9
H10 C10 C9 H9A 159.7 163.8
C11 C10 H10A C9 123.3 121.7
H10A C10 C11 H11 176.8 163.8
C11 C10 H10A H10 241.6 240.8
H10A C10 C9 C8 156.2 164.7
C9 C10 H10A H10 118.3 119.2
H10A C10 C9 H9 276.2 284.8
H10A C10 C9 H9A 37.1 44.7
C10 C9 H9 C8 238.2 239.8
H9 C9 C10 H10 38.9 43.9
H9 C9 C10 H10A 276.2 284.8
C10 C9 H9 H9A 119.1 119.9
H9 C9 C8 C7 349.7 343.8
H9 C9 C8 C22 169.4 163.7
C8 C9 H9 H9A 240.8 240.2
C10 C9 H9A C8 121.2 120.2
H9A C9 C10 H10 159.7 163.8
H9A C9 C10 H10A 37.1 44.7
C10 C9 H9A H9 240.6 240.0
H9A C9 C8 C7 228.8 223.9
H9A C9 C8 C22 48.5 43.8
C8 C9 H9A H9 119.4 119.9
H7 C7 C8 C22 180.1 179.6
C8 C7 H7 C5 180.0 180.0
H7 C7 C5 C3 180.1 179.9
H7 C7 C5 O3 358.9 359.9
O1 C2 H2 H2A 120.0 120.1
O1 C2 H2 H2B 240.0 240.1
H2A C2 H2 H2B 120.0 120.0
O1 C2 H2A H2 240.0 239.9
O1 C2 H2A H2B 120.0 120.0
H2 C2 H2A H2B 240.0 240.1
O1 C2 H2B H2 120.0 120.0
O1 C2 H2B H2A 240.0 240.0
H2 C2 H2B H2A 120.0 120.0
O2 C4 H4 H4A 120.0 120.1
O2 C4 H4 H4B 240.0 240.0
H4A C4 H4 H4B 120.0 120.0
O2 C4 H4A H4 239.9 239.9
O2 C4 H4A H4B 120.0 120.0
H4 C4 H4A H4B 240.0 240.0
O2 C4 H4B H4 120.0 120.0
O2 C4 H4B H4A 240.0 240.0
H4 C4 H4B H4A 120.0 120.0
O3 C6 H6 H6A 120.0 120.0
O3 C6 H6 H6B 240.0 240.0
H6A C6 H6 H6B 120.0 120.0
O3 C6 H6A H6 240.0 240.0
O3 C6 H6A H6B 120.0 120.0
H6 C6 H6A H6B 240.0 240.0
O3 C6 H6B H6 120.0 119.9
O3 C6 H6B H6A 240.0 239.9
H6 C6 H6B H6A 120.0 120.0
C21 C20 H20 C19 180.0 180.0
H20 C20 C19 C17 178.9 178.5
H20 C20 C19 H19 358.9 358.5
C20 C19 H19 C17 180.0 180.0
H19 C19 C20 H20 358.9 358.5
H19 C19 C17 C16 176.2 180.4
H19 C19 C17 O6 354.1 0.5
O6 C18 H18 H18A 120.0 120.0
O6 C18 H18 H18B 240.0 240.0
H18A C18 H18 H18B 120.0 120.0
O6 C18 H18A H18 240.0 240.0
O6 C18 H18A H18B 120.0 120.0
H18 C18 H18A H18B 240.0 240.0
O6 C18 H18B H18 120.0 120.0
O6 C18 H18B H18A 240.0 240.0
H18 C18 H18B H18A 120.0 120.0