PDB Chemical Component LNX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LNX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C11	C12	1.337	1.335
C11	C10	1.425	1.380
C12	S	1.690	1.759
C10	C9	1.369	1.348
S	C9	1.722	1.759
C9	C8	1.475	1.478
C8	C7	1.395	1.396
C8	C13	1.392	1.396
C7	C4	1.396	1.379
C13	C2	1.394	1.380
C4	C5	1.511	1.508
C4	C3	1.389	1.383
C2	C3	1.388	1.383
C2	C1	1.509	1.508
C5	C6	1.506	1.507
C6	O2	1.305	1.208
C6	O3	1.221	1.342
C1	C	1.503	1.506
O	C	1.213	1.209
C	O1	1.302	1.342
C1	H1	1.100	1.090
C1	H2	1.100	1.089
C3	H3	1.080	1.080
O1	H4	0.950	0.967
O3	H5	0.950	0.967
C11	H6	1.080	1.081
C12	H7	1.080	1.080
C13	H8	1.080	1.080
C7	H9	1.080	1.079
C5	H10	1.100	1.090
C5	H11	1.100	1.090
C10	H12	1.080	1.080

Bond Angles for LNX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C12	C11	C10	113.4	115.1
C11	C12	S	111.7	109.8
C12	C11	H6	123.3	122.5
C11	C12	H7	124.2	125.2
C11	C10	C9	112.0	114.7
C10	C11	H6	123.3	122.4
C11	C10	H12	124.0	122.6
C12	S	C9	92.8	91.0
S	C12	H7	124.2	125.1
C8	C7	C4	120.6	119.8
C8	C7	H9	119.7	120.0
C8	C13	H8	119.7	120.1
C7	C4	C5	120.5	119.9
C4	C7	H9	119.7	120.1
C4	C5	C6	111.1	109.5
C4	C5	H10	109.1	109.4
C4	C5	H11	109.1	109.4
C4	C3	H3	119.4	119.9
C2	C3	H3	119.4	119.8
C2	C1	C	114.0	109.5
C2	C1	H1	108.3	109.5
C2	C1	H2	108.3	109.4
C6	C5	H10	109.1	109.5
C6	C5	H11	109.1	109.5
C6	O3	H5	109.5	117.0
C1	C	O1	113.0	120.0
C	C1	H1	108.3	109.5
C	C1	H2	108.3	109.5
C	O1	H4	109.5	117.0
H1	C1	H2	109.5	109.5
H10	C5	H11	109.5	109.5

Torsion Angles for LNX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C12	C11	C10	C9	359.8	0.0
C10	C11	C12	H6	180.0	180.2
C12	C11	C10	H12	179.8	180.0
C11	C12	S	C9	0.5	0.0
S	C12	C11	H7	180.0	180.0
C10	C11	C12	S	359.8	360.0
C12	C11	C10	H6	180.0	179.8
C10	C11	C12	H7	179.8	180.0
S	C12	C11	C10	359.8	360.0
S	C12	C11	H6	179.8	179.8
C11	C12	S	H7	180.0	180.0
C9	C10	C11	H6	179.7	180.3
C11	C10	C9	H12	180.0	179.9
C12	S	C9	C10	359.4	0.0
C9	S	C12	H7	180.4	180.0
C11	C10	C9	C8	182.3	180.0
C12	S	C9	C8	177.8	180.0
C9	C8	C7	H9	1.3	0.3
C9	C8	C13	H8	358.2	359.8
C7	C8	C13	H8	179.3	180.1
C8	C7	C4	C5	174.6	180.0
C4	C7	C8	H9	180.0	179.7
C8	C7	C4	H9	180.0	180.3
C7	C4	C5	C6	277.9	90.0
C7	C4	C5	H10	38.1	210.0
C7	C4	C5	H11	157.6	330.0
C7	C4	C3	H3	181.0	179.5
C13	C2	C3	H3	178.6	180.2
C13	C2	C1	C	110.5	269.7
C13	C2	C1	H1	231.2	29.8
C13	C2	C1	H2	349.8	149.7
C5	C4	C7	H9	354.6	359.8
C5	C4	C3	H3	5.9	360.0
C6	C5	C4	H10	239.8	239.9
C6	C5	C4	H11	120.2	120.0
H10	C5	C4	H11	240.5	240.1
C2	C3	C4	H3	180.0	180.0
C4	C3	C2	H3	180.0	180.0
C3	C2	C1	C	290.8	89.9
C3	C2	C1	H1	51.5	210.0
C3	C2	C1	H2	170.1	330.0
C2	C1	C	O1	121.7	180.0
C	C1	C2	H1	239.4	240.0
C	C1	C2	H2	120.7	120.0
H1	C1	C2	H2	241.3	240.0
C4	C5	C6	H10	120.2	120.0
C4	C5	C6	H11	239.8	240.0
C5	C6	O3	H5	178.7	180.0
H10	C5	C6	H11	119.5	120.0
C2	C1	C	H1	120.7	120.0
C2	C1	C	H2	239.3	240.1
C1	C	O1	H4	179.0	180.0
H1	C1	C	H2	118.7	120.0
O	C	C1	H1	180.0	240.1
O	C	C1	H2	61.4	120.0
O	C	O1	H4	360.0	359.9
O1	C	C1	H1	1.0	60.0
O1	C	C1	H2	242.4	299.9
C2	C1	H1	C	235.9	240.0
C2	C1	H1	H2	117.9	119.9
H1	C1	C	O1	1.0	60.0
C	C1	H1	H2	242.1	239.9
C2	C1	H2	C	124.1	120.0
C2	C1	H2	H1	242.1	240.0
H2	C1	C	O1	242.4	299.9
C	C1	H2	H1	117.9	120.1
C12	C11	H6	C10	180.0	180.2
H6	C11	C12	S	179.8	179.8
H6	C11	C12	H7	359.8	359.7
H6	C11	C10	C9	179.7	180.3
H6	C11	C10	H12	359.7	0.2
H7	C12	C11	C10	179.8	180.0
C11	C12	H7	S	180.0	180.0
H7	C12	C11	H6	359.8	359.7
H7	C12	S	C9	180.4	180.0
C8	C7	H9	C4	180.0	179.7
H9	C7	C4	C5	354.6	359.8
C4	C5	H10	C6	238.5	240.0
C4	C5	H10	H11	119.3	119.9
C6	C5	H10	H11	240.7	240.0
C4	C5	H11	C6	121.5	120.0
C4	C5	H11	H10	240.7	240.1
C6	C5	H11	H10	119.3	120.1
C11	C10	H12	C9	180.0	180.1
H12	C10	C11	H6	359.7	0.2