PDB Chemical Component LNL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LNL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C1 1.362 1.342
O1 HO1 0.949 0.967
C1 O2 1.240 1.207
C1 C2 1.553 1.507
C2 C3 1.536 1.530
C2 H21 1.114 1.090
C2 H22 1.115 1.090
C3 C4 1.527 1.529
C3 H31 1.115 1.090
C3 H32 1.115 1.089
C4 C5 1.533 1.529
C4 H41 1.115 1.090
C4 H42 1.115 1.089
C5 C6 1.539 1.529
C5 H51 1.116 1.090
C5 H52 1.115 1.090
C6 C7 1.519 1.530
C6 H61 1.114 1.090
C6 H62 1.115 1.090
C7 C8 1.524 1.529
C7 H71 1.116 1.090
C7 H72 1.115 1.090
C8 C9 1.497 1.507
C8 H81 1.115 1.090
C8 H82 1.116 1.090
C9 C10 1.317 1.310
C9 H9 1.103 1.080
C10 C11 1.536 1.506
C10 H10 1.102 1.080
C11 C12 1.515 1.507
C11 H111 1.115 1.090
C11 H112 1.116 1.090
C12 C13 1.318 1.310
C12 H12 1.103 1.080
C13 C14 1.523 1.507
C13 H13 1.102 1.080
C14 C15 1.520 1.507
C14 H141 1.114 1.090
C14 H142 1.115 1.089
C15 C16 1.328 1.311
C15 H15 1.104 1.080
C16 C17 1.504 1.506
C16 H16 1.104 1.080
C17 C18 1.522 1.530
C17 H171 1.114 1.091
C17 H172 1.115 1.090
C18 H181 1.114 1.090
C18 H182 1.115 1.090
C18 H183 1.115 1.090

Bond Angles for LNL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 O1 HO1 126.8 120.0
O1 C1 O2 126.8 120.0
O1 C1 C2 107.8 120.0
O2 C1 C2 125.0 120.0
C1 C2 C3 110.9 109.5
C1 C2 H21 111.7 109.5
C1 C2 H22 111.7 109.5
C3 C2 H21 111.7 109.4
C3 C2 H22 111.7 109.5
C2 C3 C4 114.3 109.5
C2 C3 H31 110.4 109.4
C2 C3 H32 110.5 109.4
H21 C2 H22 98.7 109.5
C4 C3 H31 110.4 109.4
C4 C3 H32 110.4 109.6
C3 C4 C5 111.1 109.5
C3 C4 H41 111.6 109.4
C3 C4 H42 111.6 109.5
H31 C3 H32 99.8 109.5
C5 C4 H41 111.6 109.5
C5 C4 H42 111.6 109.5
C4 C5 C6 110.2 109.5
C4 C5 H51 112.0 109.5
C4 C5 H52 111.9 109.5
H41 C4 H42 98.8 109.5
C6 C5 H51 111.9 109.4
C6 C5 H52 111.9 109.5
C5 C6 C7 114.9 109.6
C5 C6 H61 110.2 109.5
C5 C6 H62 110.2 109.5
H51 C5 H52 98.4 109.5
C7 C6 H61 110.2 109.4
C7 C6 H62 110.2 109.4
C6 C7 C8 113.4 109.5
C6 C7 H71 110.8 109.4
C6 C7 H72 110.8 109.4
H61 C6 H62 100.0 109.5
C8 C7 H71 110.8 109.5
C8 C7 H72 110.8 109.5
C7 C8 C9 114.7 109.5
C7 C8 H81 110.3 109.5
C7 C8 H82 110.3 109.4
H71 C7 H72 99.4 109.5
C9 C8 H81 110.3 109.4
C9 C8 H82 110.3 109.5
C8 C9 C10 119.9 120.0
C8 C9 H9 126.3 120.0
H81 C8 H82 100.0 109.5
C10 C9 H9 113.7 120.0
C9 C10 C11 121.2 120.0
C9 C10 H10 111.7 119.9
C11 C10 H10 127.1 120.0
C10 C11 C12 102.9 109.4
C10 C11 H111 114.7 109.5
C10 C11 H112 114.7 109.5
C12 C11 H111 114.7 109.5
C12 C11 H112 114.7 109.4
C11 C12 C13 121.8 120.0
C11 C12 H12 126.2 120.0
H111 C11 H112 95.8 109.5
C13 C12 H12 112.0 120.0
C12 C13 C14 121.9 120.0
C12 C13 H13 111.7 120.0
C14 C13 H13 126.5 120.0
C13 C14 C15 96.3 109.4
C13 C14 H141 117.3 109.4
C13 C14 H142 117.3 109.5
C15 C14 H141 117.3 109.5
C15 C14 H142 117.3 109.5
C14 C15 C16 122.6 120.0
C14 C15 H15 125.7 120.0
H141 C14 H142 93.0 109.6
C16 C15 H15 111.7 120.0
C15 C16 C17 122.6 120.0
C15 C16 H16 112.1 119.9
C17 C16 H16 125.2 120.0
C16 C17 C18 107.7 109.5
C16 C17 H171 112.8 109.5
C16 C17 H172 112.8 109.5
C18 C17 H171 112.9 109.4
C18 C17 H172 112.9 109.5
C17 C18 H181 107.7 109.5
C17 C18 H182 112.8 109.5
C17 C18 H183 112.9 109.4
H171 C17 H172 97.6 109.5
H181 C18 H182 112.8 109.5
H181 C18 H183 112.9 109.4
H182 C18 H183 97.5 109.5

Torsion Angles for LNL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C1 O1 C2 172.5 180.1
O1 C1 C2 C3 230.5 180.0
O1 C1 C2 H21 355.7 60.1
O1 C1 C2 H22 105.2 300.0
HO1 O1 C1 O2 180.0 0.1
HO1 O1 C1 C2 7.5 180.0
O2 C1 O1 HO1 180.0 0.1
O1 C1 O2 C2 188.7 179.9
O2 C1 C2 C3 57.8 360.0
O2 C1 C2 H21 183.0 240.0
O2 C1 C2 H22 292.5 120.0
C2 C1 O1 HO1 7.5 180.0
O1 C1 C2 O2 172.7 180.1
C3 C2 C1 H21 234.8 120.0
C3 C2 C1 H22 125.3 240.0
C1 C2 C3 C4 261.2 180.0
C1 C2 C3 H31 26.4 60.0
C1 C2 C3 H32 135.9 300.1
H21 C2 C1 H22 250.5 120.0
C1 C2 C3 H21 125.2 240.0
C1 C2 C3 H22 234.8 120.0
H21 C2 C3 H22 109.5 240.0
C4 C3 C2 H31 234.8 120.0
C4 C3 C2 H32 125.3 239.9
C2 C3 C4 C5 134.5 180.0
C2 C3 C4 H41 259.7 60.0
C2 C3 C4 H42 9.2 300.1
H31 C3 C2 H32 250.5 119.9
C1 C2 H21 C3 235.2 120.0
C1 C2 H21 H22 117.6 240.0
C3 C2 H21 H22 242.4 120.0
H21 C2 C3 C4 136.0 300.0
H21 C2 C3 H31 261.2 180.0
H21 C2 C3 H32 10.7 60.1
C1 C2 H22 C3 124.8 240.0
C1 C2 H22 H21 242.4 120.0
C3 C2 H22 H21 117.6 240.1
H22 C2 C3 C4 26.4 59.9
H22 C2 C3 H31 151.7 300.0
H22 C2 C3 H32 261.2 180.1
C4 C3 C2 H21 136.0 300.0
C4 C3 C2 H22 26.4 59.9
C2 C3 C4 H31 125.2 240.0
C2 C3 C4 H32 234.7 120.0
H31 C3 C4 H32 109.5 240.0
C5 C4 C3 H41 234.7 120.0
C5 C4 C3 H42 125.2 239.9
C3 C4 C5 C6 12.5 180.0
C3 C4 C5 H51 137.8 60.1
C3 C4 C5 H52 247.2 300.1
H41 C4 C3 H42 250.5 120.0
H31 C3 C2 H21 261.2 180.0
H31 C3 C2 H22 151.7 300.0
C2 C3 H31 C4 232.6 120.0
C2 C3 H31 H32 116.3 240.1
C4 C3 H31 H32 243.7 120.1
H31 C3 C4 C5 9.2 299.9
H31 C3 C4 H41 134.5 180.0
H31 C3 C4 H42 244.0 60.0
H32 C3 C2 H21 10.7 60.1
H32 C3 C2 H22 261.2 180.1
C2 C3 H32 C4 127.4 239.9
C2 C3 H32 H31 243.7 119.9
C4 C3 H32 H31 116.3 240.0
H32 C3 C4 C5 259.8 60.0
H32 C3 C4 H41 25.0 300.0
H32 C3 C4 H42 134.5 180.0
C5 C4 C3 H31 9.2 299.9
C5 C4 C3 H32 259.8 60.0
C3 C4 C5 H41 125.3 240.1
C3 C4 C5 H42 234.7 120.1
H41 C4 C5 H42 109.5 240.0
C6 C5 C4 H51 234.7 119.9
C6 C5 C4 H52 125.3 240.0
C4 C5 C6 C7 206.4 180.0
C4 C5 C6 H61 331.6 60.0
C4 C5 C6 H62 81.1 300.0
H51 C5 C4 H52 250.6 120.0
H41 C4 C3 H31 134.5 180.0
H41 C4 C3 H32 25.0 300.0
C3 C4 H41 C5 235.0 120.0
C3 C4 H41 H42 117.5 240.0
C5 C4 H41 H42 242.5 120.0
H41 C4 C5 C6 247.2 299.9
H41 C4 C5 H51 12.5 180.0
H41 C4 C5 H52 122.0 60.0
H42 C4 C3 H31 244.0 60.0
H42 C4 C3 H32 134.5 180.0
C3 C4 H42 C5 125.0 239.9
C3 C4 H42 H41 242.5 119.9
C5 C4 H42 H41 117.5 240.0
H42 C4 C5 C6 137.8 59.9
H42 C4 C5 H51 263.1 300.0
H42 C4 C5 H52 12.5 180.0
C6 C5 C4 H41 247.2 299.9
C6 C5 C4 H42 137.8 59.9
C4 C5 C6 H51 125.3 240.0
C4 C5 C6 H52 234.7 120.1
H51 C5 C6 H52 109.4 240.0
C7 C6 C5 H61 234.8 120.0
C7 C6 C5 H62 125.2 240.0
C5 C6 C7 C8 232.7 180.0
C5 C6 C7 H71 358.0 60.0
C5 C6 C7 H72 107.4 300.0
H61 C6 C5 H62 250.5 120.0
H51 C5 C4 H41 12.5 180.0
H51 C5 C4 H42 263.1 300.0
C4 C5 H51 C6 235.6 120.0
C4 C5 H51 H52 117.8 240.0
C6 C5 H51 H52 242.2 120.0
H51 C5 C6 C7 81.1 300.0
H51 C5 C6 H61 206.3 180.0
H51 C5 C6 H62 315.8 60.0
H52 C5 C4 H41 122.0 60.0
H52 C5 C4 H42 12.5 180.0
C4 C5 H52 C6 124.4 239.9
C4 C5 H52 H51 242.1 120.0
C6 C5 H52 H51 117.8 240.1
H52 C5 C6 C7 331.7 60.0
H52 C5 C6 H61 96.9 300.0
H52 C5 C6 H62 206.4 180.0
C7 C6 C5 H51 81.1 300.0
C7 C6 C5 H52 331.7 60.0
C5 C6 C7 H61 125.3 240.0
C5 C6 C7 H62 234.7 120.0
H61 C6 C7 H62 109.5 240.0
C8 C7 C6 H71 234.7 120.0
C8 C7 C6 H72 125.3 240.0
C6 C7 C8 C9 275.3 180.0
C6 C7 C8 H81 40.6 60.0
C6 C7 C8 H82 150.1 300.0
H71 C7 C6 H72 250.6 120.0
H61 C6 C5 H51 206.3 180.0
H61 C6 C5 H52 96.9 300.0
C5 C6 H61 C7 232.1 120.1
C5 C6 H61 H62 116.1 240.0
C7 C6 H61 H62 244.0 119.9
H61 C6 C7 C8 107.4 300.0
H61 C6 C7 H71 232.7 180.0
H61 C6 C7 H72 342.1 60.0
H62 C6 C5 H51 315.8 60.0
H62 C6 C5 H52 206.4 180.0
C5 C6 H62 C7 127.9 239.9
C5 C6 H62 H61 243.9 120.0
C7 C6 H62 H61 116.0 240.1
H62 C6 C7 C8 357.9 60.0
H62 C6 C7 H71 123.2 300.0
H62 C6 C7 H72 232.6 180.0
C8 C7 C6 H61 107.4 300.0
C8 C7 C6 H62 357.9 60.0
C6 C7 C8 H71 125.3 240.0
C6 C7 C8 H72 234.7 120.0
H71 C7 C8 H72 109.4 240.0
C9 C8 C7 H81 234.7 120.0
C9 C8 C7 H82 125.2 240.0
C7 C8 C9 C10 180.5 126.9
C7 C8 C9 H9 0.5 307.0
H81 C8 C7 H82 250.6 120.0
H71 C7 C6 H61 232.7 180.0
H71 C7 C6 H62 123.2 300.0
C6 C7 H71 C8 233.3 120.1
C6 C7 H71 H72 116.6 240.1
C8 C7 H71 H72 243.4 120.0
H71 C7 C8 C9 150.0 300.0
H71 C7 C8 H81 275.3 180.0
H71 C7 C8 H82 24.8 60.0
H72 C7 C6 H61 342.1 60.0
H72 C7 C6 H62 232.6 180.0
C6 C7 H72 C8 126.7 239.9
C6 C7 H72 H71 243.3 119.9
C8 C7 H72 H71 116.6 240.0
H72 C7 C8 C9 40.6 60.0
H72 C7 C8 H81 166.0 300.0
H72 C7 C8 H82 275.4 180.0
C9 C8 C7 H71 150.0 300.0
C9 C8 C7 H72 40.6 60.0
C7 C8 C9 H81 125.3 240.0
C7 C8 C9 H82 234.8 120.0
H81 C8 C9 H82 109.5 240.0
C10 C9 C8 H9 180.1 179.9
C8 C9 C10 C11 0.7 5.2
C8 C9 C10 H10 180.6 185.3
H81 C8 C7 H71 275.3 180.0
H81 C8 C7 H72 166.0 300.0
C7 C8 H81 C9 232.2 120.0
C7 C8 H81 H82 116.1 240.0
C9 C8 H81 H82 243.9 120.0
H81 C8 C9 C10 55.2 246.9
H81 C8 C9 H9 235.2 67.0
H82 C8 C7 H71 24.8 60.0
H82 C8 C7 H72 275.4 180.0
C7 C8 H82 C9 127.7 239.9
C7 C8 H82 H81 243.9 120.0
C9 C8 H82 H81 116.2 240.0
H82 C8 C9 C10 305.8 6.9
H82 C8 C9 H9 125.7 187.0
C10 C9 C8 H81 55.2 246.9
C10 C9 C8 H82 305.8 6.9
C8 C9 C10 H9 179.9 180.1
C11 C10 C9 H10 180.0 180.0
C9 C10 C11 C12 171.8 126.9
C9 C10 C11 H111 297.0 6.9
C9 C10 C11 H112 46.5 246.9
H9 C9 C8 H81 235.2 67.0
H9 C9 C8 H82 125.7 187.0
C8 C9 H9 C10 180.1 179.9
H9 C9 C10 C11 180.7 185.2
H9 C9 C10 H10 0.7 5.2
C11 C10 C9 H9 180.7 185.2
C9 C10 C11 H10 180.0 180.0
C12 C11 C10 H111 234.7 120.0
C12 C11 C10 H112 125.2 240.0
C10 C11 C12 C13 118.4 127.8
C10 C11 C12 H12 298.4 307.8
H111 C11 C10 H112 250.5 120.0
H10 C10 C9 H9 0.7 5.2
C9 C10 H10 C11 180.0 180.0
H10 C10 C11 C12 351.8 306.9
H10 C10 C11 H111 117.1 186.9
H10 C10 C11 H112 226.6 66.9
C12 C11 C10 H10 351.8 306.9
C10 C11 C12 H111 125.3 240.0
C10 C11 C12 H112 234.8 120.1
H111 C11 C12 H112 109.5 240.0
C13 C12 C11 H12 180.0 180.0
C11 C12 C13 C14 27.3 7.5
C11 C12 C13 H13 207.2 187.5
H111 C11 C10 H10 117.1 186.9
C10 C11 H111 C12 241.2 120.0
C10 C11 H111 H112 120.6 239.9
C12 C11 H111 H112 239.4 120.0
H111 C11 C12 C13 353.1 247.8
H111 C11 C12 H12 173.1 67.7
H112 C11 C10 H10 226.6 66.9
C10 C11 H112 C12 118.8 240.0
C10 C11 H112 H111 239.4 120.0
C12 C11 H112 H111 120.6 240.0
H112 C11 C12 C13 243.7 7.7
H112 C11 C12 H12 63.6 187.7
C13 C12 C11 H111 353.1 247.8
C13 C12 C11 H112 243.7 7.7
C11 C12 C13 H12 180.0 180.0
C14 C13 C12 H13 180.1 180.0
C12 C13 C14 C15 102.1 127.2
C12 C13 C14 H141 227.3 7.3
C12 C13 C14 H142 336.8 247.2
H12 C12 C11 H111 173.1 67.7
H12 C12 C11 H112 63.6 187.7
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 C14 207.3 187.5
H12 C12 C13 H13 27.2 7.6
C14 C13 C12 H12 207.3 187.5
C12 C13 C14 H13 179.9 180.0
C15 C14 C13 H141 234.7 119.9
C15 C14 C13 H142 125.2 240.0
C13 C14 C15 C16 121.8 127.8
C13 C14 C15 H15 301.8 307.7
H141 C14 C13 H142 250.5 120.1
H13 C13 C12 H12 27.2 7.6
C12 C13 H13 C14 180.1 180.0
H13 C13 C14 C15 282.1 307.2
H13 C13 C14 H141 47.4 187.3
H13 C13 C14 H142 156.9 67.1
C15 C14 C13 H13 282.1 307.2
C13 C14 C15 H141 125.3 240.1
C13 C14 C15 H142 234.7 120.0
H141 C14 C15 H142 109.5 239.8
C16 C15 C14 H15 180.0 180.1
C14 C15 C16 C17 25.7 7.5
C14 C15 C16 H16 205.6 187.5
H141 C14 C13 H13 47.4 187.3
C13 C14 H141 C15 246.0 119.9
C13 C14 H141 H142 123.0 240.0
C15 C14 H141 H142 237.1 120.1
H141 C14 C15 C16 356.5 247.7
H141 C14 C15 H15 176.5 67.6
H142 C14 C13 H13 156.9 67.1
C13 C14 H142 C15 114.0 240.1
C13 C14 H142 H141 237.0 120.0
C15 C14 H142 H141 123.0 239.9
H142 C14 C15 C16 247.0 7.9
H142 C14 C15 H15 67.0 187.8
C16 C15 C14 H141 356.5 247.7
C16 C15 C14 H142 247.0 7.9
C14 C15 C16 H15 180.0 179.9
C17 C16 C15 H16 180.0 180.0
C15 C16 C17 C18 190.3 127.2
C15 C16 C17 H171 315.6 7.2
C15 C16 C17 H172 65.1 247.2
H15 C15 C14 H141 176.5 67.6
H15 C15 C14 H142 67.0 187.8
C14 C15 H15 C16 180.0 180.1
H15 C15 C16 C17 205.6 187.6
H15 C15 C16 H16 25.6 7.6
C17 C16 C15 H15 205.6 187.6
C15 C16 C17 H16 180.0 180.0
C18 C17 C16 H171 234.7 119.9
C18 C17 C16 H172 125.3 240.0
C16 C17 C18 H181 180.0 180.0
C16 C17 C18 H182 305.3 300.0
C16 C17 C18 H183 54.7 60.1
H171 C17 C16 H172 250.6 120.0
H16 C16 C15 H15 25.6 7.6
C15 C16 H16 C17 180.0 180.0
H16 C16 C17 C18 10.4 307.2
H16 C16 C17 H171 135.7 187.2
H16 C16 C17 H172 245.1 67.2
C18 C17 C16 H16 10.4 307.2
C16 C17 C18 H171 125.3 240.0
C16 C17 C18 H172 234.8 120.0
H171 C17 C18 H172 109.5 240.0
H181 C18 C17 H182 234.7 240.0
H181 C18 C17 H183 125.4 119.9
H182 C18 C17 H183 250.6 239.9
H171 C17 C16 H16 135.7 187.2
C16 C17 H171 C18 237.6 119.9
C16 C17 H171 H172 118.7 240.0
C18 C17 H171 H172 241.2 120.0
H171 C17 C18 H181 54.8 300.0
H171 C17 C18 H182 180.0 60.0
H171 C17 C18 H183 289.4 180.0
H172 C17 C16 H16 245.1 67.2
C16 C17 H172 C18 122.4 240.0
C16 C17 H172 H171 241.3 120.0
C18 C17 H172 H171 118.8 240.0
H172 C17 C18 H181 305.3 60.0
H172 C17 C18 H182 70.5 180.0
H172 C17 C18 H183 179.9 300.1
H181 C18 C17 H171 54.8 300.0
H181 C18 C17 H172 305.3 60.0
C17 C18 H181 H182 125.2 120.0
C17 C18 H181 H183 234.7 240.1
H182 C18 H181 H183 109.4 120.0
H182 C18 C17 H171 180.0 60.0
H182 C18 C17 H172 70.5 180.0
C17 C18 H182 H181 237.6 240.0
C17 C18 H182 H183 118.8 120.0
H181 C18 H182 H183 241.2 240.0
H183 C18 C17 H171 289.4 180.0
H183 C18 C17 H172 179.9 300.1
C17 C18 H183 H181 122.5 120.0
C17 C18 H183 H182 241.3 240.0
H181 C18 H183 H182 118.8 120.0