PDB Chemical Component LN0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LN0

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C6	S1	1.765	1.814
S1	C5	1.811	1.814
O8	C8	1.267	1.207
O4	C1	1.385	1.429
C5	C1	1.506	1.531
C5	O5	1.418	1.430
C8	C9	1.531	1.506
C8	C7	1.539	1.508
C1	C2	1.485	1.532
O5	C4	1.503	1.429
C4	C7	1.478	1.530
C4	C3	1.477	1.531
C2	C3	1.471	1.532
C2	O6	1.437	1.429
C7	N1	1.430	1.465
C3	O7	1.419	1.430
N1	C10	1.468	1.348
C10	C11	1.500	1.507
C10	O9	1.252	1.212
C11	C12	1.500	1.540
C11	N2	1.444	1.479
C15	N2	1.484	1.469
C12	C13	1.472	1.545
C18	C17	1.524	1.531
N2	C14	1.448	1.485
C16	C13	1.485	1.530
C16	C17	1.496	1.531
C14	C13	1.500	1.550
C4	H1	1.100	1.091
C14	H2	1.100	1.089
C14	H3	1.100	1.090
C5	H4	1.100	1.090
C6	H5	1.100	1.090
C6	H6	1.100	1.090
C6	H7	1.099	1.090
C11	H8	1.100	1.090
C7	H9	1.100	1.090
C9	H10	1.101	1.090
C9	H11	1.100	1.090
C9	H12	1.100	1.090
C12	H13	1.100	1.090
C12	H14	1.100	1.091
C13	H15	1.100	1.090
N1	H16	1.000	0.971
C3	H18	1.100	1.090
C18	H19	1.100	1.090
C18	H20	1.100	1.091
C18	H21	1.100	1.089
C17	H22	1.101	1.090
C17	H23	1.100	1.090
C16	H24	1.100	1.091
C16	H25	1.099	1.090
C15	H26	1.100	1.091
C15	H27	1.100	1.090
C15	H28	1.100	1.090
O7	H29	0.950	0.966
C2	H30	1.100	1.090
O6	H31	0.950	0.966
C1	H32	1.099	1.090
O4	H33	0.950	0.968

Bond Angles for LN0

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
S1	C6	H5	109.5	109.5
S1	C6	H6	109.5	109.5
S1	C6	H7	109.5	109.5
S1	C5	H4	105.8	109.5
O4	C1	H32	109.1	109.6
O5	C5	C1	110.1	109.4
C5	C1	C2	112.5	109.2
C1	C5	H4	109.1	109.5
C5	C1	H32	107.5	109.5
O5	C5	H4	110.4	109.5
C8	C9	H10	109.5	109.5
C8	C9	H11	109.5	109.5
C8	C9	H12	109.5	109.5
C8	C7	N1	103.8	109.5
C8	C7	H9	110.0	109.5
C1	C2	H30	107.7	109.6
O5	C4	H1	107.1	109.5
C7	C4	C3	116.1	109.5
C4	C7	N1	115.1	109.5
C7	C4	H1	107.4	109.5
C4	C7	H9	110.9	109.5
C4	C3	O7	107.6	109.5
C3	C4	H1	107.4	109.4
C4	C3	H18	108.6	109.5
C2	C3	H18	108.7	109.6
O6	C2	H30	108.4	109.6
C2	O6	H31	109.5	114.0
C7	N1	C10	121.5	120.0
N1	C7	H9	111.6	109.5
C7	N1	H16	119.2	120.0
O7	C3	H18	109.4	109.5
C3	O7	H29	109.5	114.0
N1	C10	O9	119.3	120.0
C10	C11	C12	113.0	109.9
C10	C11	N2	110.8	109.9
C10	C11	H8	108.5	110.1
C12	C11	N2	106.8	107.0
C11	C12	C13	104.7	105.2
C12	C11	H8	108.5	109.9
C11	C12	H13	110.7	110.3
C11	C12	H14	110.7	110.3
N2	C11	H8	109.3	109.9
C14	C13	C12	104.9	102.9
C13	C12	H13	110.6	110.3
C13	C12	H14	110.6	110.3
C12	C13	H15	110.3	110.7
C17	C18	H19	109.5	109.4
C17	C18	H20	109.5	109.4
C17	C18	H21	109.5	109.4
C18	C17	H22	107.2	109.5
C18	C17	H23	107.2	109.5
N2	C14	H2	110.6	110.7
N2	C14	H3	110.6	110.8
C16	C13	H15	110.1	110.8
C16	C17	H22	107.3	109.4
C16	C17	H23	107.2	109.5
C13	C14	H2	110.5	110.7
C13	C14	H3	110.6	110.7
C14	C13	H15	109.9	110.7
H2	C14	H3	109.4	110.6
H5	C6	H6	109.5	109.5
H5	C6	H7	109.5	109.5
H6	C6	H7	109.4	109.4
H10	C9	H11	109.5	109.5
H10	C9	H12	109.4	109.4
H11	C9	H12	109.5	109.5
H13	C12	H14	109.5	110.4
H19	C18	H20	109.5	109.5
H19	C18	H21	109.4	109.5
H20	C18	H21	109.5	109.5
H22	C17	H23	109.5	109.5
H24	C16	H25	109.4	109.5
H26	C15	H27	109.5	109.4
H26	C15	H28	109.4	109.5
H27	C15	H28	109.5	109.4

Torsion Angles for LN0

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	S1	C5	H4	306.5	310.0
H5	C6	S1	H6	240.0	240.0
H5	C6	S1	H7	120.0	120.1
H6	C6	S1	H7	240.1	240.1
C1	C5	S1	H4	242.0	240.0
S1	C5	C1	H32	172.0	177.8
O5	C5	S1	H4	119.6	120.0
O8	C8	C9	H10	0.0	274.7
O8	C8	C9	H11	120.0	34.7
O8	C8	C9	H12	240.0	154.7
O8	C8	C7	H9	182.2	218.0
O4	C1	C5	H4	298.6	297.4
C5	C1	O4	H32	116.4	120.2
O4	C1	C2	H30	307.0	303.0
S1	C5	C1	H4	116.0	120.1
O4	C1	C5	H32	242.6	239.8
O5	C5	C1	H4	238.7	240.1
C5	C1	C2	H30	68.7	62.9
S1	C5	O5	H4	243.2	240.0
O5	C5	C1	C2	53.2	57.6
C1	C5	O5	H4	120.5	119.9
O5	C5	C1	H32	294.8	297.7
C5	O5	C4	H1	298.8	301.2
C9	C8	C7	N1	123.4	157.9
C9	C8	C7	H9	3.9	37.9
H10	C9	C8	H11	240.0	240.0
H10	C9	C8	H12	120.0	120.0
H11	C9	C8	H12	240.0	240.0
C8	C7	C4	C3	190.4	183.1
C4	C7	C8	N1	121.1	120.0
C8	C7	C4	H1	310.5	303.1
C4	C7	C8	H9	240.7	240.0
C8	C7	N1	C10	212.5	275.0
N1	C7	C8	H9	119.5	120.0
C8	C7	N1	H16	32.5	94.9
C2	C1	C5	H4	174.5	177.6
C5	C1	C2	H32	241.7	240.1
C1	C2	C3	H18	169.9	176.9
O6	C2	C1	H30	118.3	120.2
C1	C2	O6	H31	180.0	299.6
C7	C4	O5	H1	244.9	239.9
O5	C4	C7	H9	306.6	303.2
O5	C4	C3	O7	70.8	62.3
C3	C4	O5	H1	117.0	119.9
O5	C4	C3	H18	189.2	182.4
C8	C7	C4	N1	246.6	240.0
C8	C7	C4	H9	118.7	120.0
O5	C4	C7	H1	114.9	120.1
C7	C4	C3	O7	307.7	302.3
C3	C4	C7	H1	239.9	240.0
C7	C4	C3	H18	66.1	62.4
C4	C7	N1	C10	98.4	155.1
N1	C7	C4	H9	232.2	240.0
C4	C7	N1	H16	278.4	335.0
O5	C4	C3	H1	243.2	240.0
C3	C4	C7	N1	303.8	303.1
C7	C4	C3	H1	120.1	120.0
C3	C4	C7	H9	71.6	63.1
C2	C3	C4	H18	120.3	120.0
O7	C3	C4	H18	241.6	239.9
C4	C3	O7	H29	71.5	173.7
C5	C1	C2	C3	309.4	303.1
C2	C3	C4	H1	66.2	62.4
C4	C3	C2	H18	239.8	240.0
O7	C3	C2	H18	119.9	120.1
C2	C3	O7	H29	194.2	293.4
C5	C1	C2	O6	187.0	183.1
C1	C2	O6	H30	242.1	239.8
O6	C2	C3	H18	293.4	296.9
C8	C7	N1	H9	241.6	240.0
N1	C7	C4	C3	303.8	303.1
N1	C7	C4	H1	63.9	63.1
C4	C7	N1	H9	127.5	120.0
C7	N1	C10	O9	0.1	359.9
O7	C3	C4	H1	187.6	182.3
C4	C3	O7	H18	117.8	120.1
C2	C3	O7	H18	240.5	239.8
C10	N1	C7	H9	330.9	35.0
C7	N1	C10	H16	180.0	179.9
N1	C10	C11	N2	141.3	162.4
N1	C10	C11	H8	21.4	41.2
C12	C11	C10	N2	119.7	117.5
C10	C11	C12	C13	218.3	239.4
C12	C11	C10	H8	239.6	238.7
C10	C11	C12	H13	337.6	358.4
C10	C11	C12	H14	99.1	120.5
N2	C11	C10	H8	119.9	121.2
O9	C10	C11	C12	81.3	100.0
O9	C10	C11	N2	321.6	342.5
O9	C10	C11	H8	201.6	221.3
C10	C11	C12	N2	238.0	240.7
C10	C11	C12	H8	120.4	121.4
N2	C11	C12	H8	242.4	240.7
C14	C13	C12	C11	354.5	338.1
C13	C12	C11	H13	240.8	241.1
C13	C12	C11	H14	119.3	118.9
C11	C12	C13	H15	112.8	96.4
H13	C12	C11	H14	238.5	237.9
C10	C11	N2	C12	123.4	119.3
C10	C11	N2	H8	240.5	238.7
N2	C11	C12	C13	340.3	358.8
C12	C11	N2	H8	117.2	119.3
N2	C11	C12	H13	99.5	117.7
N2	C11	C12	H14	221.0	239.9
C11	N2	C14	H2	78.6	202.4
C11	N2	C14	H3	200.0	79.3
C15	N2	C11	H8	44.6	26.5
C15	N2	C14	H2	295.6	81.8
C15	N2	C14	H3	57.0	318.8
C13	C12	C11	N2	340.3	358.8
C13	C12	C11	H8	97.9	118.1
C11	C12	C13	H13	119.2	118.9
C11	C12	C13	H14	240.7	241.1
C16	C13	C12	H15	121.1	123.4
C12	C13	C14	H2	269.5	155.8
C12	C13	C14	H3	148.2	278.8
C14	C13	C12	H15	241.6	241.7
H13	C12	C13	H14	121.5	122.2
C16	C17	C18	H22	238.7	240.0
C16	C17	C18	H23	121.2	120.0
H19	C18	C17	H20	240.0	240.0
H19	C18	C17	H21	120.0	120.0
H20	C18	C17	H21	240.0	240.0
H22	C17	C18	H23	242.5	239.9
C13	C14	N2	H2	240.7	118.4
C13	C14	N2	H3	119.3	241.5
N2	C14	C13	H15	270.2	279.0
H2	C14	N2	H3	238.6	123.1
C16	C13	C12	H13	114.7	100.8
C16	C13	C12	H14	353.2	338.6
C12	C13	C16	H15	238.7	236.7
C16	C13	C14	H2	28.0	274.2
C16	C13	C14	H3	266.6	37.2
C14	C13	C16	H15	122.8	123.2
C16	C17	C18	H19	180.0	180.0
C16	C17	C18	H20	300.0	300.0
C16	C17	C18	H21	60.0	60.0
C18	C17	C16	H22	121.2	120.0
C18	C17	C16	H23	238.8	240.0
C17	C16	C13	H15	47.4	303.3
H22	C17	C16	H23	117.5	120.0
C11	C12	C13	C14	354.5	338.1
C14	C13	C12	H13	235.2	219.1
C14	C13	C12	H14	113.7	96.9
C12	C13	C14	H15	118.6	118.3
N2	C14	C13	H2	119.3	241.6
N2	C14	C13	H3	240.7	118.6
C16	C13	C14	H15	237.0	236.7
H2	C14	C13	H3	121.4	237.0
C7	C4	H1	C3	234.5	240.0
H1	C4	C7	N1	63.9	63.1
H1	C4	C7	H9	191.8	183.1
H1	C4	C3	O7	187.6	182.3
H1	C4	C3	H18	305.9	302.4
H2	C14	C13	C12	269.5	155.8
N2	C14	H2	H3	122.0	236.8
C13	C14	H2	H3	238.0	123.0
H2	C14	C13	H15	150.9	37.5
H3	C14	C13	C12	148.2	278.8
N2	C14	H3	H2	238.0	123.1
C13	C14	H3	H2	122.0	236.9
H3	C14	C13	H15	29.6	160.5
O5	C5	H4	C1	121.1	119.9
H4	C5	C1	C2	174.5	177.6
H4	C5	C1	H32	56.0	57.7
S1	C6	H5	H6	120.0	120.0
S1	C6	H5	H7	240.0	240.0
H6	C6	H5	H7	119.9	120.0
S1	C6	H6	H5	239.9	240.0
S1	C6	H6	H7	120.0	119.9
H5	C6	H6	H7	240.0	240.0
S1	C6	H7	H5	120.1	120.1
S1	C6	H7	H6	240.0	240.1
H5	C6	H7	H6	120.0	120.0
C10	C11	H8	C12	236.9	238.8
C10	C11	H8	N2	120.9	121.2
C12	C11	H8	N2	244.0	242.5
H8	C11	C12	C13	97.9	118.1
H8	C11	C12	H13	217.2	237.0
H8	C11	C12	H14	338.7	359.1
C8	C7	H9	N1	114.6	120.0
H9	C7	C4	C3	71.6	63.1
C4	C7	H9	N1	230.3	240.0
H9	C7	C4	H1	191.8	183.1
H9	C7	N1	C10	330.9	35.0
H9	C7	N1	H16	150.9	215.0
C8	C9	H10	H11	120.0	120.0
C8	C9	H10	H12	240.0	240.0
H11	C9	H10	H12	120.0	120.0
C8	C9	H11	H10	240.0	240.0
C8	C9	H11	H12	120.0	120.0
H10	C9	H11	H12	240.0	240.1
C8	C9	H12	H10	120.0	120.0
C8	C9	H12	H11	240.0	240.0
H10	C9	H12	H11	120.0	120.0
H13	C12	C11	N2	99.5	117.7
C11	C12	H13	C13	244.4	244.2
H13	C12	C11	H8	217.2	237.0
C11	C12	H13	H14	122.2	122.1
C13	C12	H13	H14	237.8	237.8
H13	C12	C13	H15	353.6	337.4
H14	C12	C11	N2	221.0	239.9
C11	C12	H14	C13	115.6	115.7
H14	C12	C11	H8	338.7	359.1
C11	C12	H14	H13	237.8	237.9
C13	C12	H14	H13	122.2	122.2
H14	C12	C13	H15	232.1	215.2
C14	C13	H15	C12	115.2	113.5
H15	C13	C12	H13	353.6	337.4
H15	C13	C12	H14	232.1	215.2
H15	C13	C14	H2	150.9	37.5
H15	C13	C14	H3	29.6	160.5
C7	N1	H16	C10	180.0	180.1
H16	N1	C7	H9	150.9	215.0
H16	N1	C10	O9	180.1	180.0
C4	C3	H18	O7	242.8	239.9
H18	C3	C4	H1	305.9	302.4
H18	C3	O7	H29	313.6	53.6
C17	C18	H19	H20	120.0	119.9
C17	C18	H19	H21	240.0	240.0
H19	C18	C17	H22	301.2	300.0
H19	C18	C17	H23	58.8	60.0
H20	C18	H19	H21	120.0	120.1
C17	C18	H20	H19	240.0	240.1
C17	C18	H20	H21	120.0	120.0
H20	C18	C17	H22	61.2	59.9
H20	C18	C17	H23	178.8	180.0
H19	C18	H20	H21	240.0	239.9
C17	C18	H21	H19	120.0	119.9
C17	C18	H21	H20	240.0	240.0
H21	C18	C17	H22	181.3	179.9
H21	C18	C17	H23	298.8	300.0
H19	C18	H21	H20	120.0	120.1
H22	C17	C18	H19	301.2	300.0
H22	C17	C18	H20	61.2	59.9
H22	C17	C18	H21	181.3	179.9
C18	C17	H22	H23	116.0	120.1
C16	C17	H22	H23	244.0	240.0
H23	C17	C18	H19	58.8	60.0
H23	C17	C18	H20	178.8	180.0
H23	C17	C18	H21	298.8	300.0
C18	C17	H23	H22	244.0	240.0
C16	C17	H23	H22	116.1	120.0
H24	C16	C13	H15	168.3	63.2
H24	C16	C17	H22	226.6	300.1
H24	C16	C17	H23	109.1	180.0
H25	C16	C13	H15	286.6	183.2
H25	C16	C17	H22	108.4	180.1
H25	C16	C17	H23	350.8	60.0
H27	C15	H26	H28	120.0	119.9
H26	C15	H27	H28	240.1	240.1
H26	C15	H28	H27	120.0	119.9
H29	O7	C3	H18	313.6	53.6
H30	C2	C3	H18	50.8	57.0
H30	C2	O6	H31	297.9	59.8
H31	O6	C2	H30	297.9	59.8
C5	C1	H32	C2	121.5	119.7
H32	C1	C5	H4	56.0	57.7
H32	C1	C2	H30	187.0	182.8
H33	O4	C1	H32	63.6	299.8