PDB Chemical Component LMQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LMQ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.449 |
1.469 |
| CA |
CB |
1.547 |
1.530 |
| CA |
C |
1.522 |
1.507 |
| CB |
CB2 |
1.536 |
1.530 |
| CB |
CG |
1.547 |
1.530 |
| CG |
CD |
1.521 |
1.507 |
| CD |
OE1 |
1.235 |
1.213 |
| CD |
NE2 |
1.317 |
1.348 |
| C |
O |
1.233 |
1.209 |
| C |
OXT |
1.331 |
1.342 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.010 |
| CA |
HA |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.089 |
| CB2 |
HB21 |
1.100 |
1.090 |
| CB2 |
HB22 |
1.099 |
1.090 |
| CB2 |
HB23 |
1.100 |
1.090 |
| CG |
HG2 |
1.100 |
1.090 |
| CG |
HG3 |
1.100 |
1.089 |
| NE2 |
HE21 |
1.000 |
0.969 |
| NE2 |
HE22 |
1.000 |
0.970 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for LMQ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
CB |
109.6 |
109.5 |
| N |
CA |
C |
108.7 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
HA |
111.3 |
109.5 |
| CB |
CA |
C |
113.3 |
109.4 |
| CA |
CB |
CB2 |
110.4 |
109.5 |
| CA |
CB |
CG |
112.7 |
109.4 |
| CB |
CA |
HA |
106.5 |
109.5 |
| CA |
CB |
HB3 |
106.7 |
109.5 |
| CA |
C |
O |
120.1 |
120.0 |
| CA |
C |
OXT |
117.0 |
120.0 |
| C |
CA |
HA |
107.5 |
109.4 |
| CB2 |
CB |
CG |
109.8 |
109.5 |
| CB2 |
CB |
HB3 |
109.7 |
109.5 |
| CB |
CB2 |
HB21 |
109.5 |
109.5 |
| CB |
CB2 |
HB22 |
109.5 |
109.5 |
| CB |
CB2 |
HB23 |
109.5 |
109.5 |
| CB |
CG |
CD |
115.1 |
109.5 |
| CG |
CB |
HB3 |
107.3 |
109.5 |
| CB |
CG |
HG2 |
107.6 |
109.5 |
| CB |
CG |
HG3 |
106.4 |
109.5 |
| CG |
CD |
OE1 |
121.6 |
120.0 |
| CG |
CD |
NE2 |
117.8 |
120.0 |
| CD |
CG |
HG2 |
107.7 |
109.4 |
| CD |
CG |
HG3 |
106.4 |
109.5 |
| OE1 |
CD |
NE2 |
120.0 |
120.0 |
| CD |
NE2 |
HE21 |
110.0 |
120.0 |
| CD |
NE2 |
HE22 |
125.0 |
120.0 |
| O |
C |
OXT |
122.9 |
120.0 |
| C |
OXT |
HXT |
109.5 |
116.9 |
| H |
N |
H2 |
109.4 |
110.9 |
| HB21 |
CB2 |
HB22 |
109.5 |
109.5 |
| HB21 |
CB2 |
HB23 |
109.5 |
109.4 |
| HB22 |
CB2 |
HB23 |
109.5 |
109.5 |
| HG2 |
CG |
HG3 |
114.0 |
109.5 |
| HE21 |
NE2 |
HE22 |
125.0 |
120.0 |
Torsion Angles for LMQ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
N |
C |
235.6 |
240.0 |
| N |
CA |
CB |
CB2 |
290.9 |
180.0 |
| N |
CA |
CB |
CG |
54.1 |
300.0 |
| CB |
CA |
N |
HA |
117.5 |
120.0 |
| N |
CA |
CB |
HB3 |
171.7 |
60.0 |
| N |
CA |
C |
O |
317.4 |
340.0 |
| N |
CA |
C |
OXT |
140.4 |
160.0 |
| C |
CA |
N |
HA |
241.9 |
240.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| N |
CA |
CB |
C |
121.6 |
120.0 |
| CB |
CA |
N |
H |
200.8 |
176.1 |
| CB |
CA |
N |
H2 |
320.8 |
300.0 |
| N |
CA |
CB |
HA |
239.5 |
240.0 |
| CB |
CA |
C |
O |
79.5 |
100.0 |
| CB |
CA |
C |
OXT |
262.6 |
280.0 |
| C |
CA |
CB |
HA |
117.9 |
120.0 |
| CB2 |
CB |
CA |
CG |
236.7 |
240.0 |
| CB2 |
CB |
CA |
HB3 |
119.2 |
120.0 |
| CA |
CB |
CB2 |
HB21 |
18.8 |
60.0 |
| CA |
CB |
CB2 |
HB22 |
138.8 |
180.0 |
| CA |
CB |
CB2 |
HB23 |
258.8 |
300.0 |
| CA |
CB |
CG |
CD |
187.1 |
175.0 |
| CG |
CB |
CA |
HB3 |
242.5 |
240.0 |
| CA |
CB |
CG |
HG2 |
307.1 |
295.0 |
| CA |
CB |
CG |
HG3 |
69.6 |
55.0 |
| N |
CA |
C |
CB |
237.9 |
240.0 |
| C |
CA |
N |
H |
325.2 |
296.1 |
| C |
CA |
N |
H2 |
85.2 |
60.0 |
| N |
CA |
C |
HA |
120.5 |
120.0 |
| C |
CA |
CB |
CB2 |
169.3 |
60.0 |
| C |
CA |
CB |
CG |
292.5 |
180.0 |
| CB |
CA |
C |
HA |
242.7 |
240.0 |
| C |
CA |
CB |
HB3 |
50.1 |
299.9 |
| O |
C |
CA |
OXT |
176.9 |
180.0 |
| CA |
C |
OXT |
HXT |
176.8 |
180.0 |
| CB2 |
CB |
CA |
C |
169.3 |
60.0 |
| CA |
CB |
CB2 |
CG |
125.0 |
120.0 |
| CB2 |
CB |
CA |
HA |
51.4 |
300.0 |
| CA |
CB |
CB2 |
HB3 |
242.7 |
240.0 |
| CB2 |
CB |
CG |
CD |
310.7 |
295.0 |
| CG |
CB |
CB2 |
HB3 |
117.7 |
120.0 |
| CB2 |
CB |
CG |
HG2 |
70.7 |
55.0 |
| CB2 |
CB |
CG |
HG3 |
193.2 |
175.0 |
| HB21 |
CB2 |
CB |
HB22 |
240.0 |
240.0 |
| HB21 |
CB2 |
CB |
HB23 |
120.0 |
119.9 |
| HB22 |
CB2 |
CB |
HB23 |
240.0 |
239.9 |
| CG |
CB |
CA |
C |
292.5 |
180.0 |
| CA |
CB |
CG |
CB2 |
236.4 |
240.0 |
| CG |
CB |
CA |
HA |
174.6 |
60.0 |
| CA |
CB |
CG |
HB3 |
117.2 |
120.0 |
| CB2 |
CB |
CG |
HB3 |
240.8 |
240.0 |
| CG |
CB |
CB2 |
HB21 |
253.8 |
300.0 |
| CG |
CB |
CB2 |
HB22 |
13.8 |
60.0 |
| CG |
CB |
CB2 |
HB23 |
133.8 |
180.1 |
| CB |
CG |
CD |
OE1 |
114.3 |
360.0 |
| CB |
CG |
CD |
NE2 |
303.1 |
180.0 |
| CD |
CG |
CB |
HG2 |
240.0 |
240.1 |
| CD |
CG |
CB |
HG3 |
117.5 |
120.0 |
| HG2 |
CG |
CB |
HG3 |
237.5 |
239.9 |
| CD |
CG |
CB |
HB3 |
69.9 |
55.0 |
| CB |
CG |
CD |
HG2 |
120.0 |
120.0 |
| CB |
CG |
CD |
HG3 |
242.5 |
240.0 |
| OE1 |
CD |
CG |
NE2 |
171.2 |
180.0 |
| CG |
CD |
NE2 |
HE21 |
355.9 |
360.0 |
| CG |
CD |
NE2 |
HE22 |
175.9 |
180.0 |
| HG2 |
CG |
CD |
HG3 |
122.5 |
120.0 |
| CG |
CD |
OE1 |
NE2 |
189.0 |
180.0 |
| OE1 |
CD |
CG |
HG2 |
354.3 |
240.0 |
| OE1 |
CD |
CG |
HG3 |
231.8 |
120.0 |
| OE1 |
CD |
NE2 |
HE21 |
184.5 |
180.0 |
| OE1 |
CD |
NE2 |
HE22 |
4.5 |
0.0 |
| CG |
CD |
NE2 |
OE1 |
171.3 |
180.0 |
| NE2 |
CD |
CG |
HG2 |
183.1 |
60.0 |
| NE2 |
CD |
CG |
HG3 |
60.6 |
300.0 |
| HE21 |
NE2 |
CD |
HE22 |
180.0 |
180.0 |
| CA |
C |
O |
OXT |
183.2 |
180.0 |
| O |
C |
CA |
HA |
196.8 |
220.0 |
| O |
C |
OXT |
HXT |
360.0 |
0.0 |
| CA |
C |
OXT |
O |
176.9 |
180.0 |
| OXT |
C |
CA |
HA |
19.9 |
40.0 |
| H |
N |
CA |
CB |
200.8 |
176.1 |
| H |
N |
CA |
C |
325.2 |
296.1 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
HA |
83.3 |
56.1 |
| H2 |
N |
CA |
CB |
320.8 |
300.0 |
| H2 |
N |
CA |
C |
85.2 |
60.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
HA |
203.3 |
180.0 |
| N |
CA |
HA |
CB |
119.4 |
120.0 |
| N |
CA |
HA |
C |
241.1 |
240.0 |
| HA |
CA |
N |
H |
83.3 |
56.1 |
| HA |
CA |
N |
H2 |
203.3 |
180.0 |
| CB |
CA |
HA |
C |
121.7 |
119.9 |
| HA |
CA |
CB |
CB2 |
51.4 |
300.0 |
| HA |
CA |
CB |
CG |
174.6 |
60.0 |
| HA |
CA |
CB |
HB3 |
292.2 |
180.0 |
| HA |
CA |
C |
O |
196.8 |
220.0 |
| HA |
CA |
C |
OXT |
19.9 |
40.0 |
| HB3 |
CB |
CA |
C |
50.1 |
299.9 |
| CA |
CB |
HB3 |
CB2 |
119.6 |
120.1 |
| CA |
CB |
HB3 |
CG |
238.9 |
240.0 |
| HB3 |
CB |
CA |
HA |
292.2 |
180.0 |
| CB2 |
CB |
HB3 |
CG |
119.3 |
120.0 |
| HB3 |
CB |
CB2 |
HB21 |
136.1 |
180.0 |
| HB3 |
CB |
CB2 |
HB22 |
256.1 |
300.0 |
| HB3 |
CB |
CB2 |
HB23 |
16.1 |
60.1 |
| HB3 |
CB |
CG |
CD |
69.9 |
55.0 |
| HB3 |
CB |
CG |
HG2 |
189.9 |
175.0 |
| HB3 |
CB |
CG |
HG3 |
312.4 |
295.0 |
| HB21 |
CB2 |
CB |
CG |
253.8 |
300.0 |
| HB21 |
CB2 |
CB |
HB3 |
136.1 |
180.0 |
| CB |
CB2 |
HB21 |
HB22 |
120.0 |
120.0 |
| CB |
CB2 |
HB21 |
HB23 |
240.0 |
240.0 |
| HB22 |
CB2 |
HB21 |
HB23 |
120.0 |
120.0 |
| HB22 |
CB2 |
CB |
CG |
13.8 |
60.0 |
| HB22 |
CB2 |
CB |
HB3 |
256.1 |
300.0 |
| CB |
CB2 |
HB22 |
HB21 |
240.0 |
240.0 |
| CB |
CB2 |
HB22 |
HB23 |
120.0 |
120.0 |
| HB21 |
CB2 |
HB22 |
HB23 |
240.0 |
240.0 |
| HB23 |
CB2 |
CB |
CG |
133.8 |
180.1 |
| HB23 |
CB2 |
CB |
HB3 |
16.1 |
60.1 |
| CB |
CB2 |
HB23 |
HB21 |
120.0 |
120.0 |
| CB |
CB2 |
HB23 |
HB22 |
240.0 |
240.0 |
| HB21 |
CB2 |
HB23 |
HB22 |
120.0 |
120.0 |
| CB |
CG |
HG2 |
CD |
235.4 |
240.0 |
| HG2 |
CG |
CB |
HB3 |
189.9 |
175.0 |
| CB |
CG |
HG2 |
HG3 |
117.7 |
120.1 |
| HG2 |
CG |
CD |
OE1 |
354.3 |
240.0 |
| HG2 |
CG |
CD |
NE2 |
183.1 |
60.0 |
| CD |
CG |
HG2 |
HG3 |
242.3 |
240.0 |
| CB |
CG |
HG3 |
CD |
123.1 |
120.0 |
| HG3 |
CG |
CB |
HB3 |
312.4 |
295.0 |
| CB |
CG |
HG3 |
HG2 |
241.6 |
239.9 |
| HG3 |
CG |
CD |
OE1 |
231.8 |
120.0 |
| HG3 |
CG |
CD |
NE2 |
60.6 |
300.0 |
| CD |
CG |
HG3 |
HG2 |
118.5 |
119.9 |
| CD |
NE2 |
HE21 |
HE22 |
180.0 |
180.0 |
| CD |
NE2 |
HE22 |
HE21 |
180.0 |
180.0 |