PDB Chemical Component LKG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LKG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C10 |
1.401 |
1.375 |
N1 |
C11 |
1.386 |
1.351 |
N1 |
N2 |
1.237 |
1.396 |
N3 |
C10 |
1.329 |
1.323 |
N3 |
N4 |
1.242 |
1.287 |
C4 |
C5 |
1.395 |
1.394 |
C4 |
C7 |
1.397 |
1.484 |
C4 |
C3 |
1.398 |
1.393 |
C5 |
C6 |
1.394 |
1.380 |
C6 |
C1 |
1.398 |
1.384 |
C7 |
C8 |
1.400 |
1.411 |
C7 |
N2 |
1.351 |
1.315 |
C8 |
C9 |
1.388 |
1.359 |
C10 |
C9 |
1.391 |
1.408 |
C13 |
C14 |
1.396 |
1.383 |
C13 |
C18 |
1.393 |
1.383 |
C13 |
C12 |
1.531 |
1.507 |
C15 |
C14 |
1.398 |
1.381 |
C15 |
C16 |
1.394 |
1.387 |
C17 |
C16 |
1.396 |
1.387 |
C17 |
C18 |
1.394 |
1.382 |
C16 |
O1 |
1.359 |
1.359 |
C12 |
C11 |
1.531 |
1.507 |
C11 |
N4 |
1.329 |
1.310 |
C3 |
C2 |
1.394 |
1.380 |
C2 |
C1 |
1.392 |
1.382 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.079 |
C8 |
H8 |
1.080 |
1.081 |
C15 |
H15 |
1.080 |
1.081 |
C17 |
H17 |
1.080 |
1.080 |
C14 |
H14 |
1.080 |
1.080 |
O1 |
HO1 |
0.950 |
0.967 |
C18 |
H18 |
1.080 |
1.080 |
C12 |
H12 |
1.100 |
1.090 |
C12 |
H12A |
1.100 |
1.090 |
C9 |
H9 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C2 |
H2 |
1.080 |
1.080 |
C1 |
H1 |
1.080 |
1.079 |
Bond Angles for LKG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
N1 |
C11 |
103.4 |
106.0 |
C10 |
N1 |
N2 |
122.5 |
120.1 |
N1 |
C10 |
N3 |
106.9 |
106.8 |
N1 |
C10 |
C9 |
119.7 |
119.4 |
C11 |
N1 |
N2 |
134.1 |
133.9 |
N1 |
C11 |
C12 |
123.5 |
126.1 |
N1 |
C11 |
N4 |
108.0 |
107.7 |
N1 |
N2 |
C7 |
121.7 |
120.4 |
C10 |
N3 |
N4 |
111.4 |
109.3 |
N3 |
C10 |
C9 |
133.4 |
133.8 |
N3 |
N4 |
C11 |
110.2 |
110.2 |
C5 |
C4 |
C7 |
120.0 |
120.1 |
C5 |
C4 |
C3 |
119.4 |
119.8 |
C4 |
C5 |
C6 |
120.5 |
119.9 |
C4 |
C5 |
H5 |
119.8 |
120.1 |
C7 |
C4 |
C3 |
120.6 |
120.1 |
C4 |
C7 |
C8 |
120.2 |
119.6 |
C4 |
C7 |
N2 |
119.7 |
119.6 |
C4 |
C3 |
C2 |
120.4 |
119.9 |
C4 |
C3 |
H3 |
119.8 |
120.1 |
C5 |
C6 |
C1 |
119.8 |
120.1 |
C6 |
C5 |
H5 |
119.7 |
120.1 |
C5 |
C6 |
H6 |
120.1 |
120.0 |
C6 |
C1 |
C2 |
120.1 |
120.2 |
C1 |
C6 |
H6 |
120.1 |
119.9 |
C6 |
C1 |
H1 |
120.0 |
119.9 |
C8 |
C7 |
N2 |
120.1 |
120.8 |
C7 |
C8 |
C9 |
119.4 |
120.1 |
C7 |
C8 |
H8 |
120.3 |
119.9 |
C8 |
C9 |
C10 |
116.6 |
119.2 |
C9 |
C8 |
H8 |
120.3 |
120.0 |
C8 |
C9 |
H9 |
121.7 |
120.4 |
C10 |
C9 |
H9 |
121.7 |
120.4 |
C14 |
C13 |
C18 |
120.8 |
120.1 |
C14 |
C13 |
C12 |
120.1 |
120.0 |
C13 |
C14 |
C15 |
119.3 |
120.0 |
C13 |
C14 |
H14 |
120.3 |
119.9 |
C18 |
C13 |
C12 |
119.0 |
119.9 |
C13 |
C18 |
C17 |
119.8 |
120.1 |
C13 |
C18 |
H18 |
120.1 |
120.0 |
C13 |
C12 |
C11 |
111.4 |
109.5 |
C13 |
C12 |
H12 |
108.8 |
109.5 |
C13 |
C12 |
H12A |
108.4 |
109.5 |
C14 |
C15 |
C16 |
119.8 |
120.0 |
C14 |
C15 |
H15 |
120.1 |
120.0 |
C15 |
C14 |
H14 |
120.4 |
120.0 |
C15 |
C16 |
C17 |
120.7 |
119.9 |
C15 |
C16 |
O1 |
120.1 |
120.1 |
C16 |
C15 |
H15 |
120.1 |
120.0 |
C16 |
C17 |
C18 |
119.5 |
119.9 |
C17 |
C16 |
O1 |
119.2 |
120.1 |
C16 |
C17 |
H17 |
120.2 |
120.0 |
C18 |
C17 |
H17 |
120.2 |
120.0 |
C17 |
C18 |
H18 |
120.1 |
119.9 |
C16 |
O1 |
HO1 |
109.5 |
114.0 |
C12 |
C11 |
N4 |
128.5 |
126.1 |
C11 |
C12 |
H12 |
108.8 |
109.5 |
C11 |
C12 |
H12A |
108.4 |
109.5 |
C3 |
C2 |
C1 |
119.9 |
120.2 |
C2 |
C3 |
H3 |
119.8 |
120.1 |
C3 |
C2 |
H2 |
120.0 |
119.9 |
C1 |
C2 |
H2 |
120.0 |
120.0 |
C2 |
C1 |
H1 |
119.9 |
119.9 |
H12 |
C12 |
H12A |
111.0 |
109.5 |
Torsion Angles for LKG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
N1 |
C10 |
N2 |
180.2 |
179.8 |
C10 |
N1 |
C11 |
C12 |
181.0 |
180.0 |
C10 |
N1 |
C11 |
N4 |
359.8 |
360.0 |
C10 |
N1 |
N2 |
C7 |
359.7 |
0.0 |
N1 |
C10 |
N3 |
N4 |
359.9 |
360.0 |
N3 |
C10 |
N1 |
C9 |
179.6 |
180.1 |
C8 |
C9 |
C10 |
N1 |
359.7 |
0.1 |
N1 |
C10 |
C9 |
H9 |
179.7 |
179.6 |
C10 |
N1 |
C11 |
N2 |
179.8 |
180.3 |
C11 |
N1 |
C10 |
N3 |
0.2 |
0.0 |
C11 |
N1 |
C10 |
C9 |
180.6 |
179.9 |
C11 |
N1 |
N2 |
C7 |
179.5 |
180.3 |
N3 |
N4 |
C11 |
N1 |
0.1 |
360.0 |
C13 |
C12 |
C11 |
N1 |
286.4 |
90.0 |
C12 |
C11 |
N1 |
N4 |
181.2 |
180.0 |
N1 |
C11 |
C12 |
H12 |
166.4 |
330.0 |
N1 |
C11 |
C12 |
H12A |
45.6 |
210.0 |
C10 |
N1 |
N2 |
C11 |
180.2 |
179.7 |
N2 |
N1 |
C10 |
N3 |
180.0 |
180.2 |
N2 |
N1 |
C10 |
C9 |
0.4 |
0.1 |
N2 |
N1 |
C11 |
C12 |
1.2 |
359.7 |
N2 |
N1 |
C11 |
N4 |
180.0 |
179.7 |
C4 |
C7 |
N2 |
N1 |
179.7 |
180.2 |
C8 |
C7 |
N2 |
N1 |
0.1 |
359.5 |
N3 |
C10 |
N1 |
C11 |
0.2 |
0.0 |
N3 |
C10 |
N1 |
N2 |
180.0 |
180.2 |
N1 |
C10 |
N3 |
C9 |
180.5 |
179.9 |
C10 |
N3 |
N4 |
C11 |
360.0 |
0.0 |
C8 |
C9 |
C10 |
N3 |
180.3 |
180.0 |
N3 |
C10 |
C9 |
H9 |
0.3 |
359.5 |
N1 |
C11 |
N4 |
N3 |
0.1 |
360.0 |
N4 |
N3 |
C10 |
C9 |
179.4 |
180.1 |
C12 |
C11 |
N4 |
N3 |
178.9 |
180.0 |
C7 |
C4 |
C5 |
C3 |
180.3 |
180.3 |
C5 |
C4 |
C7 |
C8 |
198.4 |
180.0 |
C5 |
C4 |
C7 |
N2 |
18.7 |
359.3 |
C5 |
C4 |
C3 |
C2 |
359.9 |
0.0 |
C5 |
C4 |
C3 |
H3 |
179.9 |
180.0 |
C4 |
C5 |
C6 |
C1 |
0.0 |
0.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
H6 |
180.0 |
180.0 |
N1 |
N2 |
C7 |
C4 |
179.7 |
180.2 |
C5 |
C4 |
C7 |
C3 |
179.7 |
179.7 |
C7 |
C4 |
C5 |
C6 |
180.3 |
180.0 |
C7 |
C4 |
C5 |
H5 |
0.3 |
0.0 |
C7 |
C4 |
C3 |
C2 |
179.6 |
179.7 |
C7 |
C4 |
C3 |
H3 |
359.6 |
359.7 |
C8 |
C7 |
C4 |
N2 |
179.6 |
180.7 |
C4 |
C7 |
C8 |
C9 |
180.4 |
180.0 |
C4 |
C7 |
C8 |
H8 |
0.4 |
359.9 |
C5 |
C4 |
C3 |
C7 |
180.3 |
180.3 |
C3 |
C4 |
C5 |
C6 |
360.0 |
359.7 |
C3 |
C4 |
C5 |
H5 |
179.9 |
179.8 |
C3 |
C4 |
C7 |
C8 |
18.7 |
0.3 |
C3 |
C4 |
C7 |
N2 |
199.1 |
179.6 |
C4 |
C3 |
C2 |
C1 |
0.2 |
0.5 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
C4 |
C3 |
C2 |
H2 |
180.2 |
180.0 |
C6 |
C5 |
C4 |
C7 |
180.3 |
180.0 |
C6 |
C5 |
C4 |
C3 |
360.0 |
359.7 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
C5 |
C6 |
C1 |
C2 |
0.1 |
0.5 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
H1 |
180.1 |
179.9 |
C1 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
C6 |
359.8 |
359.3 |
C6 |
C1 |
C2 |
H2 |
179.8 |
179.8 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.5 |
N1 |
N2 |
C7 |
C8 |
0.1 |
359.5 |
C8 |
C7 |
C4 |
C3 |
18.7 |
0.3 |
C4 |
C7 |
C8 |
N2 |
180.4 |
179.3 |
C7 |
C8 |
C9 |
C10 |
0.1 |
359.4 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.1 |
C7 |
C8 |
C9 |
H9 |
180.1 |
180.0 |
N2 |
C7 |
C4 |
C3 |
199.1 |
179.6 |
C4 |
C7 |
N2 |
C8 |
179.6 |
180.7 |
N2 |
C7 |
C8 |
C9 |
0.0 |
0.7 |
N2 |
C7 |
C8 |
H8 |
180.0 |
180.6 |
N1 |
C10 |
C9 |
C8 |
359.7 |
0.1 |
N3 |
C10 |
C9 |
C8 |
180.3 |
180.0 |
C9 |
C8 |
C7 |
N2 |
0.0 |
0.7 |
C7 |
C8 |
C9 |
H8 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
H9 |
180.0 |
179.5 |
C9 |
C10 |
N1 |
C11 |
180.6 |
179.9 |
C9 |
C10 |
N1 |
N2 |
0.4 |
0.1 |
N1 |
C10 |
C9 |
N3 |
179.4 |
180.1 |
C9 |
C10 |
N3 |
N4 |
179.4 |
180.1 |
C10 |
C9 |
C8 |
H8 |
180.1 |
179.6 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.5 |
C18 |
C13 |
C14 |
C12 |
179.1 |
180.2 |
C14 |
C13 |
C18 |
C17 |
0.5 |
0.0 |
C14 |
C13 |
C18 |
H18 |
180.5 |
179.9 |
C14 |
C13 |
C12 |
C11 |
282.8 |
90.0 |
C14 |
C13 |
C12 |
H12 |
42.8 |
210.0 |
C14 |
C13 |
C12 |
H12A |
163.6 |
330.0 |
C13 |
C14 |
C15 |
C16 |
0.4 |
360.0 |
C13 |
C14 |
C15 |
H15 |
180.4 |
180.0 |
C15 |
C14 |
C13 |
H14 |
180.0 |
180.1 |
C14 |
C13 |
C18 |
C12 |
180.9 |
179.8 |
C18 |
C13 |
C14 |
C15 |
359.3 |
0.0 |
C18 |
C13 |
C14 |
H14 |
179.3 |
180.0 |
C18 |
C13 |
C12 |
C11 |
103.7 |
269.7 |
C18 |
C13 |
C12 |
H12 |
223.7 |
29.7 |
C18 |
C13 |
C12 |
H12A |
344.5 |
149.7 |
C16 |
C17 |
C18 |
C13 |
0.0 |
360.0 |
C13 |
C18 |
C17 |
H17 |
180.0 |
180.0 |
C17 |
C18 |
C13 |
H18 |
180.0 |
180.1 |
N1 |
C11 |
C12 |
C13 |
286.4 |
90.0 |
C14 |
C13 |
C12 |
C18 |
179.1 |
180.2 |
C12 |
C13 |
C14 |
C15 |
180.2 |
179.8 |
C12 |
C13 |
C14 |
H14 |
0.2 |
359.7 |
C12 |
C13 |
C18 |
C17 |
179.6 |
180.3 |
C12 |
C13 |
C18 |
H18 |
359.6 |
0.2 |
C13 |
C12 |
C11 |
N4 |
107.9 |
270.0 |
C11 |
C12 |
C13 |
H12 |
240.0 |
240.0 |
C11 |
C12 |
C13 |
H12A |
119.2 |
120.0 |
H12 |
C12 |
C13 |
H12A |
239.2 |
240.0 |
C15 |
C14 |
C13 |
C18 |
359.3 |
0.0 |
C15 |
C14 |
C13 |
C12 |
180.2 |
179.8 |
C13 |
C14 |
C15 |
H14 |
180.0 |
179.9 |
C14 |
C15 |
C16 |
C17 |
0.1 |
0.1 |
C14 |
C15 |
C16 |
O1 |
179.6 |
180.0 |
C16 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
H15 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
H14 |
180.4 |
180.0 |
C15 |
C16 |
C17 |
C18 |
359.7 |
360.0 |
C17 |
C16 |
C15 |
O1 |
180.5 |
180.1 |
C15 |
C16 |
C17 |
H17 |
179.7 |
180.0 |
C15 |
C16 |
O1 |
HO1 |
251.5 |
90.0 |
C13 |
C18 |
C17 |
C16 |
0.0 |
360.0 |
C15 |
C16 |
C17 |
O1 |
179.5 |
179.9 |
C17 |
C16 |
C15 |
H15 |
180.1 |
180.0 |
C18 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
C16 |
C17 |
C18 |
H18 |
180.0 |
180.1 |
C17 |
C16 |
O1 |
HO1 |
71.0 |
270.0 |
C17 |
C18 |
C13 |
C12 |
179.6 |
180.3 |
C13 |
C18 |
C17 |
H18 |
180.0 |
179.9 |
C18 |
C17 |
C16 |
O1 |
180.2 |
180.0 |
C16 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
C15 |
C16 |
O1 |
C17 |
180.5 |
180.1 |
O1 |
C16 |
C15 |
H15 |
359.6 |
360.0 |
O1 |
C16 |
C17 |
C18 |
180.2 |
180.0 |
O1 |
C16 |
C17 |
H17 |
0.1 |
0.0 |
C12 |
C11 |
N1 |
N2 |
1.2 |
359.7 |
N1 |
C11 |
C12 |
N4 |
178.6 |
180.0 |
N3 |
N4 |
C11 |
C12 |
178.9 |
180.0 |
C13 |
C12 |
C11 |
H12 |
120.0 |
120.0 |
C13 |
C12 |
C11 |
H12A |
240.8 |
240.0 |
H12 |
C12 |
C11 |
H12A |
120.8 |
120.0 |
N4 |
C11 |
N1 |
N2 |
180.0 |
179.7 |
N1 |
C11 |
N4 |
C12 |
181.3 |
180.0 |
N4 |
C11 |
C12 |
H12 |
347.9 |
150.0 |
N4 |
C11 |
C12 |
H12A |
227.1 |
30.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
C6 |
C1 |
C2 |
C3 |
359.8 |
359.3 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.5 |
C3 |
C2 |
C1 |
H1 |
179.8 |
179.8 |
C2 |
C1 |
C6 |
H6 |
180.1 |
180.5 |
C6 |
C1 |
C2 |
H1 |
180.0 |
179.5 |
C1 |
C2 |
C3 |
H3 |
180.2 |
180.5 |
C3 |
C2 |
C1 |
H2 |
180.0 |
179.5 |
H5 |
C5 |
C4 |
C7 |
0.3 |
0.0 |
H5 |
C5 |
C4 |
C3 |
179.9 |
179.8 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C6 |
C1 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
0.0 |
360.0 |
C5 |
C6 |
H6 |
C1 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.0 |
360.0 |
H6 |
C6 |
C1 |
C2 |
180.1 |
180.5 |
H6 |
C6 |
C1 |
H1 |
0.1 |
359.9 |
H8 |
C8 |
C7 |
N2 |
180.0 |
180.6 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.1 |
H8 |
C8 |
C9 |
C10 |
180.1 |
179.6 |
H8 |
C8 |
C9 |
H9 |
0.1 |
0.1 |
C14 |
C15 |
H15 |
C16 |
180.0 |
180.0 |
H15 |
C15 |
C14 |
H14 |
0.4 |
0.0 |
H15 |
C15 |
C16 |
C17 |
180.1 |
180.0 |
H15 |
C15 |
C16 |
O1 |
359.6 |
360.0 |
C16 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
H17 |
C17 |
C16 |
O1 |
0.1 |
0.0 |
H17 |
C17 |
C18 |
H18 |
0.0 |
0.1 |
H14 |
C14 |
C13 |
C18 |
179.3 |
180.0 |
H14 |
C14 |
C13 |
C12 |
0.2 |
359.7 |
C13 |
C14 |
H14 |
C15 |
180.0 |
180.1 |
H14 |
C14 |
C15 |
C16 |
180.4 |
180.0 |
H14 |
C14 |
C15 |
H15 |
0.4 |
0.0 |
H18 |
C18 |
C13 |
C12 |
359.6 |
0.2 |
C13 |
C18 |
H18 |
C17 |
180.0 |
180.1 |
H18 |
C18 |
C17 |
H17 |
0.0 |
0.1 |
C13 |
C12 |
H12 |
C11 |
238.4 |
240.0 |
C13 |
C12 |
H12 |
H12A |
119.2 |
120.0 |
H12 |
C12 |
C11 |
N4 |
347.9 |
150.0 |
C11 |
C12 |
H12 |
H12A |
240.8 |
240.0 |
C13 |
C12 |
H12A |
C11 |
121.1 |
120.0 |
C13 |
C12 |
H12A |
H12 |
240.5 |
240.0 |
H12A |
C12 |
C11 |
N4 |
227.1 |
30.0 |
C11 |
C12 |
H12A |
H12 |
119.5 |
120.0 |
C8 |
C9 |
H9 |
C10 |
180.0 |
179.5 |
H9 |
C9 |
C8 |
H8 |
0.1 |
0.1 |
C4 |
C3 |
H3 |
C2 |
180.0 |
180.1 |
H3 |
C3 |
C2 |
C1 |
180.2 |
180.5 |
H3 |
C3 |
C2 |
H2 |
0.2 |
0.1 |
C3 |
C2 |
H2 |
C1 |
180.0 |
180.5 |
H2 |
C2 |
C3 |
H3 |
0.2 |
0.1 |
H2 |
C2 |
C1 |
H1 |
359.8 |
0.3 |
C6 |
C1 |
H1 |
C2 |
180.0 |
180.5 |
H1 |
C1 |
C6 |
H6 |
0.1 |
359.9 |
H1 |
C1 |
C2 |
H2 |
359.8 |
0.3 |