PDB Chemical Component LK4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LK4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N31 C30 1.164 1.162
C30 C27 1.279 1.429
C27 C28 1.381 1.395
C28 C29 1.373 1.395
C27 C26 1.408 1.394
C26 C25 1.399 1.395
C29 C24 1.376 1.390
C25 C24 1.398 1.390
C24 C23 1.491 1.501
C23 O22 1.386 1.427
O22 C20 1.370 1.361
C20 C19 1.419 1.392
C19 C18 1.418 1.395
C20 C21 1.361 1.395
C21 C15 1.366 1.404
C18 C16 1.407 1.404
C15 C16 1.394 1.416
C16 C17 1.396 1.404
C15 C14 1.373 1.405
C14 C13 1.361 1.394
C17 C12 1.411 1.385
C13 C12 1.375 1.381
C12 S11 1.599 1.767
S11 O33 1.476 1.451
S11 O32 1.475 1.450
S11 N 1.624 1.709
N CA 1.463 1.462
CA C 1.522 1.518
C O 1.239 1.224
C OXT 1.242 1.360
CA CB 1.545 1.538
CB CG 1.523 1.531
CG CD 1.511 1.509
CD OE1 1.249 1.224
CD OE2 1.252 1.356
C28 H28 1.081 1.087
C26 H26 1.080 1.088
C29 H29 1.080 1.087
C25 H25 1.080 1.087
C23 H231 1.100 1.095
C23 H232 1.100 1.096
C19 H19 1.080 1.086
C21 H21 1.080 1.089
C18 H18 1.080 1.088
C14 H14 1.080 1.088
C17 H17 1.080 1.089
C13 H13 1.079 1.087
N H 1.000 1.030
CA HA 1.100 1.097
CB HBC1 1.101 1.097
CB HBC2 1.100 1.097
OXT HXT 0.950 0.981
CG HGC1 1.100 1.096
CG HGC2 1.100 1.097
OE2 HE2 0.950 0.981

Bond Angles for LK4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N31 C30 C27 170.4 179.9
C30 C27 C28 114.6 120.0
C30 C27 C26 124.5 120.0
C27 C28 C29 119.8 120.0
C28 C27 C26 120.9 120.0
C27 C28 H28 120.1 120.9
C28 C29 C24 119.6 119.6
C29 C28 H28 120.1 119.1
C28 C29 H29 120.2 119.5
C27 C26 C25 119.6 120.0
C27 C26 H26 120.2 120.8
C26 C25 C24 117.5 119.7
C25 C26 H26 120.2 119.2
C26 C25 H25 121.3 119.4
C29 C24 C25 122.6 120.7
C29 C24 C23 112.1 119.7
C24 C29 H29 120.2 120.8
C25 C24 C23 125.1 119.7
C24 C25 H25 121.3 120.9
C24 C23 O22 117.9 109.0
C24 C23 H231 106.8 111.0
C24 C23 H232 104.8 110.7
C23 O22 C20 112.8 117.0
O22 C23 H231 106.7 109.0
O22 C23 H232 104.8 109.1
O22 C20 C19 126.1 120.0
O22 C20 C21 112.6 120.0
C20 C19 C18 119.1 120.0
C19 C20 C21 121.3 120.0
C20 C19 H19 120.5 120.3
C19 C18 C16 118.6 120.7
C18 C19 H19 120.5 119.7
C19 C18 H18 120.7 118.8
C20 C21 C15 119.3 120.7
C20 C21 H21 120.4 119.1
C21 C15 C16 122.5 119.3
C21 C15 C14 113.6 121.5
C15 C21 H21 120.4 120.2
C18 C16 C15 119.2 119.3
C18 C16 C17 123.2 121.5
C16 C18 H18 120.7 120.5
C15 C16 C17 117.6 119.3
C16 C15 C14 123.9 119.3
C16 C17 C12 118.3 120.0
C16 C17 H17 120.9 119.8
C15 C14 C13 118.0 120.7
C15 C14 H14 121.0 120.5
C14 C13 C12 120.9 119.3
C13 C14 H14 121.0 118.9
C14 C13 H13 119.6 119.3
C17 C12 C13 121.4 121.5
C17 C12 S11 125.2 119.3
C12 C17 H17 120.8 120.2
C13 C12 S11 113.4 119.2
C12 C13 H13 119.6 121.4
C12 S11 O33 113.5 108.0
C12 S11 O32 106.7 106.9
C12 S11 N 106.5 101.6
O33 S11 O32 114.2 120.2
O33 S11 N 106.0 109.1
O32 S11 N 109.6 109.4
S11 N CA 119.1 120.5
S11 N H 106.4 118.2
N CA C 112.0 108.1
N CA CB 110.1 112.1
CA N H 106.4 116.4
N CA HA 107.5 107.2
CA C O 119.7 125.5
CA C OXT 119.9 111.9
C CA CB 109.9 112.2
C CA HA 107.7 107.7
O C OXT 120.4 122.6
C OXT HXT 109.5 115.3
CA CB CG 110.2 116.2
CB CA HA 109.6 109.3
CA CB HBC1 109.2 108.8
CA CB HBC2 109.1 108.3
CB CG CD 111.9 113.9
CG CB HBC1 109.2 109.8
CG CB HBC2 109.1 107.3
CB CG HGC1 108.7 111.3
CB CG HGC2 108.1 109.8
CG CD OE1 117.3 123.9
CG CD OE2 119.8 112.7
CD CG HGC1 108.6 108.5
CD CG HGC2 108.1 107.3
OE1 CD OE2 122.8 123.4
CD OE2 HE2 109.5 115.1
H231 C23 H232 116.3 107.9
HBC1 CB HBC2 110.0 106.0
HGC1 CG HGC2 111.4 105.6

Torsion Angles for LK4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N31 C30 C27 C28 257.7 104.7
N31 C30 C27 C26 76.9 284.7
C30 C27 C28 C29 178.5 179.9
C28 C27 C30 C26 180.8 180.0
C30 C27 C28 H28 358.5 0.0
C30 C27 C26 C25 180.7 180.0
C30 C27 C26 H26 0.7 0.1
C30 C27 C28 C26 179.2 180.0
C27 C28 C29 C24 1.9 0.1
C29 C28 C27 H28 180.0 179.9
C27 C28 C29 H29 181.9 180.0
C28 C27 C26 C25 359.9 359.9
C28 C27 C26 H26 179.9 180.1
C29 C28 C27 C26 359.3 360.0
C27 C28 C29 H28 180.0 180.1
C28 C29 C24 C25 357.6 360.0
C28 C29 C24 C23 183.0 180.0
C24 C29 C28 H29 180.0 180.1
C30 C27 C26 C28 180.8 180.0
C26 C27 C28 C29 359.3 360.0
C26 C27 C28 H28 179.3 180.1
C27 C26 C25 C24 359.8 0.1
C25 C26 C27 H26 180.0 179.9
C27 C26 C25 H25 179.7 180.0
C27 C26 C25 H26 180.0 180.1
C29 C24 C25 C26 1.5 360.0
C26 C25 C24 C23 175.4 180.0
C24 C25 C26 H25 180.0 180.1
C24 C29 C28 H28 181.9 180.0
C28 C29 C24 H29 180.0 179.9
C26 C25 C24 C29 1.5 360.0
C25 C24 C29 C23 174.6 180.0
C29 C24 C25 H25 181.5 180.0
C29 C24 C23 O22 232.0 90.0
C29 C24 C23 H231 352.0 210.1
C29 C24 C23 H232 116.0 329.9
C24 C25 C26 H26 179.7 179.9
C26 C25 C24 H25 180.0 179.9
C29 C24 C25 C23 186.1 180.0
C25 C24 C29 H29 177.6 180.0
C25 C24 C23 O22 57.6 270.0
C25 C24 C23 H231 177.6 30.1
C25 C24 C23 H232 301.5 149.9
C29 C24 C23 C25 174.4 180.0
C23 C24 C29 H29 3.0 0.0
C23 C24 C25 H25 355.4 0.0
C24 C23 O22 C20 131.5 181.3
O22 C23 C24 H231 240.0 239.9
O22 C23 C24 H232 116.0 120.1
H231 C23 C24 H232 236.0 240.2
C24 C23 O22 H231 120.0 121.3
C24 C23 O22 H232 244.0 238.9
C23 O22 C20 C19 8.8 0.0
C23 O22 C20 C21 190.6 179.9
H231 C23 O22 H232 124.0 117.6
C20 O22 C23 H231 11.5 60.0
C20 O22 C23 H232 247.5 302.4
O22 C20 C19 C18 181.3 179.9
C19 C20 O22 C21 178.2 180.1
O22 C20 C19 H19 1.3 360.0
O22 C20 C21 C15 179.0 180.0
O22 C20 C21 H21 359.0 0.1
O22 C20 C19 C21 181.9 179.9
C20 C19 C18 C16 0.0 0.0
C18 C19 C20 H19 180.0 179.9
C20 C19 C18 H18 180.0 180.0
C19 C20 C21 C15 0.7 360.0
C19 C20 C21 H21 180.7 180.0
C18 C19 C20 C21 359.3 0.0
C20 C19 C18 H19 180.0 180.1
C19 C18 C16 C15 0.5 360.0
C19 C18 C16 C17 180.1 180.0
C16 C18 C19 H18 180.0 180.0
O22 C20 C21 C19 178.3 180.1
C21 C20 C19 C18 359.3 0.0
C21 C20 C19 H19 179.4 180.1
C20 C21 C15 C16 359.8 0.0
C20 C21 C15 C14 180.0 180.0
C15 C21 C20 H21 180.0 179.9
C20 C21 C15 H21 180.0 180.1
C18 C16 C15 C21 359.5 0.0
C21 C15 C16 C17 180.0 180.0
C16 C15 C21 C14 179.8 180.0
C21 C15 C14 C13 179.9 180.0
C21 C15 C14 H14 360.0 360.0
C16 C18 C19 H19 180.0 180.0
C19 C18 C16 H18 180.0 180.0
C21 C15 C16 C18 359.5 0.0
C15 C16 C18 C17 180.5 180.0
C18 C16 C15 C14 179.3 180.0
C18 C16 C17 C12 180.8 180.0
C18 C16 C17 H17 0.9 360.0
C21 C15 C16 C14 180.2 180.0
C16 C15 C21 H21 179.8 180.0
C18 C16 C15 C17 179.6 180.0
C15 C16 C18 H18 180.5 180.0
C15 C16 C17 C12 0.4 0.0
C15 C16 C17 H17 180.4 180.0
C16 C15 C14 C13 0.1 0.0
C16 C15 C14 H14 180.1 180.0
C18 C16 C17 C15 180.5 180.0
C17 C16 C18 H18 0.1 0.0
C17 C16 C15 C14 359.8 360.0
C16 C17 C12 C13 359.6 0.0
C16 C17 C12 S11 180.9 180.0
C12 C17 C16 H17 180.0 180.0
C21 C15 C14 C16 179.8 180.0
C14 C15 C21 H21 0.0 360.0
C14 C15 C16 C17 359.8 360.0
C15 C14 C13 C12 359.8 0.0
C13 C14 C15 H14 180.0 180.0
C15 C14 C13 H13 179.8 180.0
C15 C14 C13 H14 180.0 180.0
C17 C12 C13 C14 0.3 360.0
C14 C13 C12 S11 179.2 180.0
C12 C13 C14 H13 180.0 180.0
C16 C17 C12 H17 180.0 180.0
C14 C13 C12 C17 0.3 360.0
C13 C12 C17 S11 178.7 180.0
C17 C12 C13 H13 180.4 180.0
C17 C12 S11 O33 332.3 204.6
C17 C12 S11 O32 205.6 335.3
C17 C12 S11 N 88.6 90.0
C12 C13 C14 H14 179.8 180.0
C14 C13 C12 H13 180.0 180.0
C17 C12 C13 S11 181.1 180.0
C13 C12 C17 H17 179.5 180.0
C13 C12 S11 O33 153.5 24.7
C13 C12 S11 O32 26.7 155.3
C13 C12 S11 N 269.8 270.0
C17 C12 S11 C13 178.8 180.0
S11 C12 C17 H17 0.8 0.0
S11 C12 C13 H13 359.2 0.0
O33 S11 C12 O32 126.7 229.3
O33 S11 C12 N 243.7 114.7
O32 S11 C12 N 117.0 245.3
C12 S11 N CA 73.9 270.0
C12 S11 N H 193.9 115.8
C12 S11 O33 O32 237.3 122.9
C12 S11 O33 N 116.6 250.3
O32 S11 O33 N 239.3 127.4
O33 S11 N CA 195.2 156.1
O33 S11 N H 315.2 1.9
C12 S11 O32 O33 126.3 236.6
C12 S11 O32 N 245.1 109.3
O33 S11 O32 N 118.7 232.8
O32 S11 N CA 318.9 22.9
O32 S11 N H 78.9 228.6
C12 S11 N O33 238.8 113.9
C12 S11 N O32 115.1 247.2
O33 S11 N O32 236.3 133.3
S11 N CA C 77.4 145.9
S11 N CA CB 200.0 270.1
CA N S11 H 240.0 154.2
S11 N CA HA 319.4 30.0
S11 N CA H 120.0 205.4
N CA C O 219.6 4.5
N CA C OXT 40.4 184.6
C CA N CB 237.4 235.8
C CA N HA 118.1 115.9
N CA CB CG 172.0 302.6
CB CA N HA 240.7 240.1
N CA CB HBC1 292.0 178.2
N CA CB HBC2 52.3 63.4
N CA C CB 122.7 124.1
C CA N H 317.4 300.5
N CA C HA 242.1 244.5
O C CA OXT 179.2 179.9
CA C OXT HXT 179.2 179.9
C CA CB CG 295.8 64.5
CB CA C HA 119.4 120.3
C CA CB HBC1 55.8 300.0
C CA CB HBC2 176.1 185.3
CA C O OXT 180.8 180.1
O C CA CB 96.9 240.3
O C CA HA 337.5 120.0
O C OXT HXT 360.0 360.0
CA C OXT O 179.2 179.9
OXT C CA CB 277.7 60.4
OXT C CA HA 158.3 300.1
N CA CB C 236.2 238.1
CB CA N H 80.1 64.7
N CA CB HA 118.0 118.7
CB CA C O 96.9 240.3
CB CA C OXT 277.7 60.4
C CA CB HA 241.8 240.6
CA CB CG CD 187.9 176.0
CG CB CA HBC1 240.0 124.5
CG CB CA HBC2 119.7 239.2
CA CB CG HGC1 307.8 299.0
CA CB CG HGC2 68.9 55.6
HBC1 CB CA HBC2 239.7 114.7
CG CB CA HA 54.0 183.9
CA CB CG HBC1 120.0 236.0
CA CB CG HBC2 240.3 121.3
CB CG CD OE1 195.3 4.5
CB CG CD OE2 14.3 184.0
CD CG CB HGC1 240.0 236.9
CD CG CB HGC2 119.0 120.4
HBC1 CB CG HBC2 120.3 245.3
HGC1 CG CB HGC2 238.9 243.4
CD CG CB HBC1 67.9 300.0
CD CG CB HBC2 307.6 54.7
CB CG CD HGC1 120.0 124.6
CB CG CD HGC2 241.0 238.3
OE1 CD CG OE2 181.0 180.6
CG CD OE2 HE2 181.0 180.6
HGC1 CG CD HGC2 121.0 113.7
CG CD OE1 OE2 179.0 179.4
OE1 CD CG HGC1 75.3 240.0
OE1 CD CG HGC2 314.2 126.3
OE1 CD OE2 HE2 360.0 0.1
CG CD OE2 OE1 181.0 180.6
OE2 CD CG HGC1 254.3 59.4
OE2 CD CG HGC2 133.3 305.7
C27 C28 H28 C29 180.0 179.9
H28 C28 C27 C26 179.3 180.1
H28 C28 C29 C24 181.9 180.0
H28 C28 C29 H29 1.9 359.9
C27 C26 H26 C25 180.0 179.9
H26 C26 C25 C24 179.7 179.9
H26 C26 C25 H25 359.7 359.9
C28 C29 H29 C24 180.0 180.1
H29 C29 C28 H28 1.9 359.9
H29 C29 C24 C25 177.6 180.0
H29 C29 C24 C23 3.0 0.0
C26 C25 H25 C24 180.0 180.1
H25 C25 C26 H26 359.7 359.9
H25 C25 C24 C23 355.4 0.0
C24 C23 H231 O22 233.1 239.9
C24 C23 H231 H232 116.5 121.5
H231 C23 O22 C20 11.5 60.0
O22 C23 H231 H232 243.5 241.6
C24 C23 H232 O22 124.8 120.0
C24 C23 H232 H231 242.4 238.4
H232 C23 O22 C20 247.5 302.4
O22 C23 H232 H231 117.6 118.3
C20 C19 H19 C18 180.0 179.9
H19 C19 C20 C21 179.4 180.1
H19 C19 C18 C16 180.0 180.0
H19 C19 C18 H18 360.0 359.9
C20 C21 H21 C15 180.0 179.9
H21 C21 C15 C16 179.8 180.0
H21 C21 C15 C14 0.0 360.0
C19 C18 H18 C16 180.0 180.0
H18 C18 C19 H19 360.0 359.9
H18 C18 C16 C15 180.5 180.0
H18 C18 C16 C17 0.1 0.0
C15 C14 H14 C13 180.0 180.0
H14 C14 C13 C12 179.8 180.0
H14 C14 C13 H13 359.8 360.0
C16 C17 H17 C12 180.0 180.0
H17 C17 C12 C13 179.5 180.0
H17 C17 C12 S11 0.8 0.0
C14 C13 H13 C12 180.0 180.0
H13 C13 C14 H14 359.8 360.0
H13 C13 C12 S11 359.2 0.0
S11 N H CA 232.1 155.3
H N CA C 317.4 300.5
H N CA CB 80.1 64.7
H N CA HA 199.4 184.6
N CA HA C 120.8 116.1
N CA HA CB 240.4 238.3
HA CA N H 199.4 184.6
HA CA C O 337.5 120.0
HA CA C OXT 158.3 300.1
C CA HA CB 119.6 122.2
HA CA CB CG 54.0 183.9
HA CA CB HBC1 174.0 59.5
HA CA CB HBC2 294.3 304.7
CA CB HBC1 CG 239.4 128.2
HBC1 CB CA HA 174.0 59.5
CA CB HBC1 HBC2 119.7 243.8
HBC1 CB CG CD 67.9 300.0
CG CB HBC1 HBC2 240.3 115.6
HBC1 CB CG HGC1 187.9 63.0
HBC1 CB CG HGC2 308.9 179.6
CA CB HBC2 CG 120.4 233.9
HBC2 CB CA HA 294.3 304.7
CA CB HBC2 HBC1 240.2 116.6
HBC2 CB CG CD 307.6 54.7
CG CB HBC2 HBC1 119.8 242.8
HBC2 CB CG HGC1 67.5 177.7
HBC2 CB CG HGC2 188.6 294.3
CB CG HGC1 CD 238.0 233.9
HGC1 CG CB HBC1 187.9 63.0
HGC1 CG CB HBC2 67.5 177.7
CB CG HGC1 HGC2 119.0 119.1
HGC1 CG CD OE1 75.3 240.0
HGC1 CG CD OE2 254.3 59.4
CD CG HGC1 HGC2 241.0 245.2
CB CG HGC2 CD 121.3 124.3
HGC2 CG CB HBC1 308.9 179.6
HGC2 CG CB HBC2 188.6 294.3
CB CG HGC2 HGC1 240.6 239.9
HGC2 CG CD OE1 314.2 126.3
HGC2 CG CD OE2 133.3 305.7
CD CG HGC2 HGC1 119.3 115.6