PDB Chemical Component LGJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LGJ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.404	1.383
C1	C4	1.400	1.380
C2	C9	1.401	1.383
C3	C6	1.410	1.379
C3	C7	1.406	1.382
C4	C14	1.411	1.393
C5	C8	1.412	1.379
C5	C13	1.412	1.394
C6	C15	1.405	1.396
C7	C16	1.410	1.390
C8	C17	1.412	1.389
C9	C19	1.413	1.379
C10	C13	1.396	1.393
C10	C18	1.395	1.381
C11	C15	1.397	1.394
C11	C16	1.394	1.386
C12	C20	1.378	1.381
C12	C21	1.410	1.393
C13	C14	1.460	1.483
C14	C19	1.406	1.394
C15	C22	1.453	1.480
C16	N29	1.400	1.401
C17	C18	1.400	1.393
C17	N32	1.399	1.398
C18	F37	1.334	1.351
C19	S41	1.773	1.762
C20	C24	1.480	1.470
C20	N29	1.378	1.370
C21	C26	1.479	1.507
C21	N27	1.338	1.310
C22	N28	1.293	1.304
C22	N30	1.360	1.381
C23	N30	1.376	1.348
C23	N31	1.400	1.349
C23	O33	1.232	1.218
C24	N32	1.413	1.348
C24	O34	1.222	1.216
C25	S41	1.771	1.814
C26	F38	1.370	1.399
C26	F39	1.377	1.399
C26	F40	1.363	1.399
N27	N29	1.334	1.401
N28	N31	1.372	1.401
O35	S41	1.454	1.422
O36	S41	1.469	1.420
C1	H1	1.080	1.081
C2	H2	1.080	1.080
C3	H3	1.080	1.080
C4	H4	1.080	1.080
C5	H5	1.079	1.080
C6	H6	1.080	1.080
C7	H7	1.080	1.080
C8	H8	1.080	1.080
C9	H9	1.080	1.080
C10	H10	1.080	1.080
C11	H11	1.080	1.081
C12	H12	1.080	1.080
C25	H25	1.100	1.090
C25	H25A	1.100	1.090
C25	H25B	1.100	1.090
N30	HN30	1.000	0.970
N31	HN31	1.001	0.971
N32	HN32	1.000	0.970

Bond Angles for LGJ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C4	119.4	120.1
C1	C2	C9	119.6	120.3
C2	C1	H1	120.3	119.9
C1	C2	H2	120.2	119.9
C1	C4	C14	121.3	119.9
C4	C1	H1	120.3	120.0
C1	C4	H4	119.4	120.0
C2	C9	C19	121.2	120.1
C9	C2	H2	120.2	119.9
C2	C9	H9	119.4	119.9
C6	C3	C7	120.4	120.2
C3	C6	C15	119.5	120.0
C6	C3	H3	119.8	119.9
C3	C6	H6	120.2	120.0
C3	C7	C16	119.3	120.2
C7	C3	H3	119.8	119.9
C3	C7	H7	120.4	119.9
C4	C14	C13	116.8	120.1
C4	C14	C19	119.4	119.7
C14	C4	H4	119.3	120.1
C8	C5	C13	120.6	120.0
C5	C8	C17	118.9	120.1
C8	C5	H5	119.7	120.0
C5	C8	H8	120.6	120.0
C5	C13	C10	119.8	119.9
C5	C13	C14	121.9	120.0
C13	C5	H5	119.7	120.0
C6	C15	C11	120.1	119.7
C6	C15	C22	121.0	120.1
C15	C6	H6	120.3	119.9
C7	C16	C11	120.2	120.0
C7	C16	N29	123.3	120.0
C16	C7	H7	120.3	119.9
C8	C17	C18	119.8	120.1
C8	C17	N32	120.8	120.0
C17	C8	H8	120.6	119.9
C9	C19	C14	119.0	119.9
C9	C19	S41	118.1	120.1
C19	C9	H9	119.4	120.0
C13	C10	C18	119.7	119.9
C10	C13	C14	118.2	120.0
C13	C10	H10	120.2	120.1
C10	C18	C17	121.2	120.0
C10	C18	F37	118.8	120.0
C18	C10	H10	120.2	120.0
C15	C11	C16	120.5	119.8
C11	C15	C22	118.9	120.1
C15	C11	H11	119.7	120.1
C11	C16	N29	116.5	120.0
C16	C11	H11	119.8	120.1
C20	C12	C21	104.0	107.7
C12	C20	C24	128.5	126.6
C12	C20	N29	105.7	107.0
C20	C12	H12	128.0	126.1
C12	C21	C26	128.3	125.5
C12	C21	N27	113.2	108.8
C21	C12	H12	128.0	126.2
C13	C14	C19	123.8	120.2
C14	C19	S41	122.9	120.1
C15	C22	N28	126.0	125.8
C15	C22	N30	119.0	125.7
C16	N29	C20	128.7	126.2
C16	N29	N27	117.3	126.1
C18	C17	N32	119.3	119.9
C17	C18	F37	120.0	120.0
C17	N32	C24	125.3	120.0
C17	N32	HN32	117.4	120.1
C19	S41	C25	104.5	104.5
C19	S41	O35	108.4	104.2
C19	S41	O36	108.1	104.3
C24	C20	N29	125.8	126.5
C20	C24	N32	118.2	120.0
C20	C24	O34	120.0	120.0
C20	N29	N27	114.0	107.7
C26	C21	N27	118.5	125.6
C21	C26	F38	114.8	109.5
C21	C26	F39	115.0	109.5
C21	C26	F40	112.9	109.5
C21	N27	N29	103.1	108.8
N28	C22	N30	115.0	108.5
C22	N28	N31	103.4	108.1
C22	N30	C23	106.1	108.3
C22	N30	HN30	126.9	125.9
N30	C23	N31	103.9	107.6
N30	C23	O33	128.6	126.2
C23	N30	HN30	126.9	125.9
N31	C23	O33	127.5	126.2
C23	N31	N28	111.6	107.5
C23	N31	HN31	124.2	126.2
N32	C24	O34	121.8	120.0
C24	N32	HN32	117.3	120.0
C25	S41	O35	108.8	110.5
C25	S41	O36	106.4	110.6
S41	C25	H25	109.5	109.5
S41	C25	H25A	109.5	109.5
S41	C25	H25B	109.5	109.5
F38	C26	F39	101.1	109.4
F38	C26	F40	105.1	109.5
F39	C26	F40	106.7	109.5
N28	N31	HN31	124.2	126.3
O35	S41	O36	119.7	121.0
H25	C25	H25A	109.5	109.5
H25	C25	H25B	109.5	109.5
H25A	C25	H25B	109.4	109.4

Torsion Angles for LGJ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C4	C14	359.6	360.0
C4	C1	C2	H1	180.0	180.3
C2	C1	C4	H4	179.7	180.0
C1	C2	C9	C19	359.3	360.0
C9	C2	C1	H2	180.0	180.0
C1	C2	C9	H9	179.3	179.9
C4	C1	C2	C9	0.4	0.0
C2	C1	C4	H1	180.0	179.7
C4	C1	C2	H2	180.4	180.0
C1	C4	C14	C13	179.6	180.0
C1	C4	C14	C19	0.6	360.0
C14	C4	C1	H4	180.0	180.0
C9	C2	C1	C4	0.4	0.0
C9	C2	C1	H1	180.4	179.7
C1	C2	C9	H2	180.0	180.0
C2	C9	C19	C14	0.9	360.0
C2	C9	C19	S41	180.2	180.0
C19	C9	C2	H9	180.0	180.1
C6	C3	C7	C16	359.8	360.0
C7	C3	C6	H3	180.0	180.3
C6	C3	C7	H7	179.8	180.0
C3	C6	C15	C11	359.7	359.9
C3	C6	C15	C22	182.2	179.9
C15	C6	C3	H6	180.0	180.1
C7	C3	C6	C15	359.8	0.1
C6	C3	C7	H3	180.0	179.7
C7	C3	C6	H6	179.9	180.0
C3	C7	C16	C11	1.0	360.0
C3	C7	C16	N29	179.5	180.0
C16	C7	C3	H7	180.0	180.0
C14	C4	C1	H1	179.7	180.3
C1	C4	C14	H4	180.0	180.0
C5	C13	C14	C4	94.0	113.6
C9	C19	C14	C4	359.1	0.1
C10	C13	C14	C4	275.7	293.5
C13	C14	C4	C19	179.0	180.0
C4	C14	C19	S41	179.8	180.0
C8	C5	C13	C10	359.1	0.0
C8	C5	C13	C14	180.8	180.0
C13	C5	C8	H5	180.0	180.2
C5	C8	C17	C18	0.4	0.0
C5	C8	C17	N32	178.9	180.0
C17	C8	C5	H8	180.0	180.0
C4	C14	C13	C5	94.0	113.6
C13	C5	C8	C17	0.1	359.9
C8	C5	C13	H5	180.0	179.8
C13	C5	C8	H8	180.1	180.0
C5	C13	C10	C18	1.2	360.0
C10	C13	C5	C14	178.3	180.1
C5	C13	C10	H10	181.2	179.9
C5	C13	C14	C19	273.0	293.6
C15	C6	C3	C7	359.8	0.1
C15	C6	C3	H3	179.9	179.8
C3	C6	C15	H6	180.0	179.9
C6	C15	C11	C16	1.1	0.0
C11	C15	C6	C22	177.5	180.0
C6	C15	C11	H11	181.1	180.0
C6	C15	C22	N28	356.9	180.0
C6	C15	C22	N30	173.7	359.7
C16	C7	C3	H3	179.8	180.3
C3	C7	C16	H7	180.0	180.0
C15	C11	C16	C7	358.5	360.0
C11	C16	C7	N29	181.5	180.0
C7	C16	C11	H11	178.6	180.0
C7	C16	N29	C20	81.2	45.2
C7	C16	N29	N27	258.2	225.1
C17	C8	C5	C13	0.1	359.9
C17	C8	C5	H5	180.1	179.7
C5	C8	C17	H8	180.0	180.0
C10	C18	C17	C8	359.8	360.0
C18	C17	C8	N32	181.6	180.1
C8	C17	C18	F37	180.0	180.0
C8	C17	N32	C24	314.7	18.2
C8	C17	N32	HN32	134.7	198.2
C19	C9	C2	H2	179.3	180.0
C2	C9	C19	H9	180.0	179.9
C4	C14	C19	C9	359.1	0.1
C13	C14	C19	C9	180.2	180.0
C14	C19	C9	S41	180.7	180.0
C9	C19	S41	C25	11.0	116.3
C9	C19	S41	O35	126.9	232.4
C9	C19	S41	O36	258.0	0.2
C4	C14	C13	C10	275.7	293.5
C5	C13	C10	C14	181.6	179.9
C10	C13	C5	H5	179.1	180.3
C13	C10	C18	C17	359.4	0.0
C13	C10	C18	F37	179.2	180.0
C18	C10	C13	H10	180.0	180.0
C10	C13	C14	C19	94.7	113.5
C8	C17	C18	C10	359.8	360.0
C18	C10	C13	C14	179.5	180.1
C13	C10	C18	H10	180.0	180.0
C10	C18	C17	N32	181.4	180.0
C17	C18	C10	F37	180.1	180.0
C6	C15	C11	C22	182.4	180.0
C11	C15	C6	H6	179.7	180.0
C7	C16	C11	C15	358.5	360.0
C15	C11	C16	N29	179.9	180.0
C16	C11	C15	H11	180.0	180.1
C11	C15	C22	N28	179.3	359.9
C11	C15	C22	N30	356.2	179.7
C7	C16	C11	N29	178.6	180.0
C11	C16	C7	H7	181.0	180.0
C16	C11	C15	C22	178.7	180.1
C15	C11	C16	H11	180.0	179.9
C11	C16	N29	C20	259.7	225.2
C11	C16	N29	N27	76.8	45.1
C20	C12	C21	C26	180.8	180.0
C20	C12	C21	N27	0.4	0.0
C21	C12	C20	H12	180.0	180.2
C16	N29	C20	C12	178.1	180.0
C24	C20	C12	N29	181.0	180.1
C12	C20	C24	N32	334.3	5.6
C12	C20	C24	O34	153.9	185.7
C12	C20	N29	N27	1.0	0.1
C21	C12	C20	C24	180.2	180.1
C21	C12	C20	N29	359.2	359.9
C20	C12	C21	H12	180.0	179.8
C26	C21	C12	N27	180.4	180.0
C12	C21	C26	F38	79.4	90.0
C12	C21	C26	F39	196.1	210.0
C12	C21	C26	F40	318.9	330.0
C12	C21	N27	N29	0.2	0.0
C4	C14	C13	C19	181.0	180.0
C13	C14	C4	H4	359.6	0.0
C5	C13	C14	C10	178.3	180.1
C14	C13	C5	H5	0.8	0.2
C9	C19	C14	C13	180.2	180.0
C14	C13	C10	C18	179.5	180.1
C14	C13	C10	H10	359.6	0.0
C13	C14	C19	S41	0.9	0.0
C4	C14	C19	C13	179.0	180.0
C19	C14	C4	H4	180.6	180.0
C9	C19	C14	S41	179.3	180.0
C14	C19	C9	H9	180.9	180.0
C14	C19	S41	C25	190.4	296.3
C14	C19	S41	O35	306.2	52.4
C14	C19	S41	O36	77.4	180.2
C6	C15	C22	C11	177.5	180.0
C22	C15	C6	H6	2.2	0.0
C22	C15	C11	C16	178.7	180.1
C22	C15	C11	H11	358.6	0.0
N28	C22	C15	N30	183.1	180.2
C15	C22	N28	N31	178.6	180.0
C15	C22	N30	C23	181.4	180.0
C15	C22	N30	HN30	1.4	0.0
C7	C16	N29	C11	181.5	180.0
N29	C16	C7	H7	359.5	360.0
N29	C16	C11	H11	360.0	0.1
C12	C20	N29	C16	178.1	180.0
C24	C20	N29	C16	357.2	359.9
C20	N29	C16	N27	183.0	180.1
C21	N27	N29	C16	181.8	180.0
C8	C17	C18	N32	178.5	179.9
C18	C17	C8	H8	180.4	180.0
C10	C18	C17	F37	179.9	180.0
C17	C18	C10	H10	179.3	180.0
C18	C17	N32	C24	133.2	198.1
C18	C17	N32	HN32	313.2	18.1
C8	C17	N32	C18	181.6	180.1
N32	C17	C8	H8	358.9	360.0
N32	C17	C18	F37	1.5	0.0
C20	C24	N32	C17	177.4	185.0
C17	N32	C24	O34	357.8	4.9
C24	N32	C17	HN32	180.0	180.0
C10	C18	F37	C17	180.1	180.0
F37	C18	C10	H10	359.2	0.1
F37	C18	C17	N32	1.5	0.0
C9	C19	S41	C14	180.7	180.0
S41	C19	C9	H9	0.2	0.0
C25	S41	C19	O35	244.2	243.9
C25	S41	C19	O36	113.0	116.1
C19	S41	C25	H25	180.0	60.0
C19	S41	C25	H25A	300.0	180.0
C19	S41	C25	H25B	60.0	300.0
O35	S41	C19	O36	228.8	232.2
C24	C20	C12	C21	180.2	180.1
C12	C20	C24	N29	178.9	179.9
C24	C20	C12	H12	0.2	359.8
C16	N29	C20	C24	357.2	359.9
C17	N32	C24	C20	177.4	185.0
C24	C20	N29	N27	180.1	179.9
N32	C24	C20	O34	180.4	180.0
C20	C24	N32	HN32	357.4	5.0
N29	C20	C12	C21	359.2	359.9
C12	C20	N29	C24	180.9	180.1
N29	C20	C12	H12	179.2	179.7
C16	N29	C20	N27	177.1	179.9
N29	C20	C24	N32	155.5	185.7
N29	C20	C24	O34	335.1	5.8
C21	N27	N29	C20	359.3	360.0
C12	C21	C26	N27	179.6	180.0
C26	C21	C12	H12	0.8	0.3
C26	C21	N27	N29	179.8	180.0
F38	C26	C21	F39	243.3	240.1
F38	C26	C21	F40	120.5	120.0
F39	C26	C21	F40	237.2	240.0
C12	C21	N27	C26	180.3	180.0
N27	C21	C12	H12	180.4	180.3
C16	N29	N27	C21	181.8	180.0
C20	N29	N27	C21	359.3	360.0
N27	C21	C26	F38	259.8	270.0
N27	C21	C26	F39	16.5	30.0
N27	C21	C26	F40	139.3	150.0
C15	C22	N28	N30	177.0	179.8
N28	C22	N30	C23	358.6	359.7
N28	C22	N30	HN30	178.6	179.8
C23	N31	N28	C22	358.8	359.9
C22	N28	N31	HN31	178.8	179.9
C15	C22	N30	N28	182.8	180.2
N30	C22	N28	N31	1.6	0.2
C22	N30	C23	N31	0.5	0.2
C22	N30	C23	O33	180.7	180.0
C23	N30	C22	HN30	180.0	180.0
C22	N30	C23	HN30	180.0	180.0
N31	C23	N30	O33	179.8	180.2
N30	C23	N31	N28	0.4	360.0
N30	C23	N31	HN31	180.4	180.0
C22	N28	N31	C23	358.8	359.9
N30	C23	N31	O33	180.2	179.8
N31	C23	N30	HN30	180.5	180.1
N28	N31	C23	HN31	180.0	180.0
N30	C23	O33	N31	179.7	180.2
O33	C23	N30	HN30	0.7	359.9
O33	C23	N31	N28	180.2	180.2
O33	C23	N31	HN31	0.2	0.2
C17	N32	C24	HN32	180.0	180.0
N32	C24	C20	N29	155.5	185.7
C20	C24	N32	O34	179.6	180.0
O34	C24	C20	N29	335.1	5.8
C20	C24	O34	N32	180.4	180.0
O34	C24	N32	HN32	177.8	184.9
C19	S41	C25	O35	115.6	111.6
C19	S41	C25	O36	245.8	248.3
O35	S41	C25	O36	130.2	136.7
H25	C25	S41	H25A	240.0	240.0
H25	C25	S41	H25B	120.0	120.0
H25A	C25	S41	H25B	240.0	240.0
F38	C26	C21	N27	259.8	270.0
C21	C26	F38	F39	124.4	120.0
C21	C26	F38	F40	235.3	239.9
F39	C26	F38	F40	110.9	120.0
F39	C26	C21	N27	16.5	30.0
C21	C26	F39	F38	235.8	240.0
C21	C26	F39	F40	126.1	120.1
F38	C26	F39	F40	250.3	240.1
F40	C26	C21	N27	139.3	150.0
C21	C26	F40	F38	125.8	120.0
C21	C26	F40	F39	232.7	239.9
F38	C26	F40	F39	106.9	119.9
C16	N29	N27	C20	182.5	180.1
N31	N28	C22	N30	1.6	0.2
N28	N31	C23	O33	180.2	180.2
C23	N31	N28	HN31	180.0	180.0
C19	S41	O35	C25	247.0	248.3
C19	S41	O35	O36	124.5	116.7
C25	S41	O35	O36	237.5	228.5
O35	S41	C25	H25	64.4	308.4
O35	S41	C25	H25A	184.5	68.4
O35	S41	C25	H25B	304.4	188.4
C19	S41	O36	C25	111.7	111.8
C19	S41	O36	O35	235.4	243.3
C25	S41	O36	O35	123.6	131.5
O36	S41	C25	H25	294.2	171.6
O36	S41	C25	H25A	54.2	291.7
O36	S41	C25	H25B	174.2	51.6
C2	C1	H1	C4	180.0	180.3
H1	C1	C2	C9	180.4	179.7
H1	C1	C2	H2	0.4	359.7
H1	C1	C4	C14	179.7	180.3
H1	C1	C4	H4	359.7	0.2
H2	C2	C1	C4	180.4	180.0
C1	C2	H2	C9	180.0	180.0
H2	C2	C1	H1	0.4	359.7
H2	C2	C9	C19	179.3	180.0
H2	C2	C9	H9	359.3	360.0
C6	C3	H3	C7	180.0	180.3
H3	C3	C6	C15	179.9	179.8
H3	C3	C6	H6	359.9	359.7
H3	C3	C7	C16	179.8	180.3
H3	C3	C7	H7	359.8	0.3
C1	C4	H4	C14	180.0	180.0
H4	C4	C1	H1	359.7	0.2
H4	C4	C14	C13	359.6	0.0
H4	C4	C14	C19	180.6	180.0
C8	C5	H5	C13	180.0	180.2
H5	C5	C8	C17	180.1	179.7
H5	C5	C8	H8	0.1	359.7
H5	C5	C13	C10	179.1	180.3
H5	C5	C13	C14	0.8	0.2
H6	C6	C3	C7	179.9	180.0
C3	C6	H6	C15	180.0	180.1
H6	C6	C3	H3	359.9	359.7
H6	C6	C15	C11	179.7	180.0
H6	C6	C15	C22	2.2	0.0
C3	C7	H7	C16	180.0	180.0
H7	C7	C3	H3	359.8	0.3
H7	C7	C16	C11	181.0	180.0
H7	C7	C16	N29	359.5	360.0
H8	C8	C5	C13	180.1	180.0
C5	C8	H8	C17	180.0	180.0
H8	C8	C5	H5	0.1	359.7
H8	C8	C17	C18	180.4	180.0
H8	C8	C17	N32	358.9	360.0
C2	C9	H9	C19	180.0	180.1
H9	C9	C2	H2	359.3	360.0
H9	C9	C19	C14	180.9	180.0
H9	C9	C19	S41	0.2	0.0
C13	C10	H10	C18	180.0	180.0
H10	C10	C13	C14	359.6	0.0
H10	C10	C18	C17	179.3	180.0
H10	C10	C18	F37	359.2	0.1
C15	C11	H11	C16	180.0	180.1
H11	C11	C15	C22	358.6	0.0
H11	C11	C16	N29	360.0	0.1
C20	C12	H12	C21	180.0	180.3
H12	C12	C20	C24	0.2	359.8
H12	C12	C20	N29	179.2	179.7
H12	C12	C21	C26	0.8	0.3
H12	C12	C21	N27	180.4	180.3
H25	C25	S41	O35	64.4	308.4
H25	C25	S41	O36	294.2	171.6
S41	C25	H25	H25A	120.0	120.0
S41	C25	H25	H25B	240.0	240.0
H25A	C25	H25	H25B	120.0	120.0
H25A	C25	S41	O35	184.5	68.4
H25A	C25	S41	O36	54.2	291.7
S41	C25	H25A	H25	239.9	240.0
S41	C25	H25A	H25B	120.0	120.0
H25	C25	H25A	H25B	240.0	240.0
H25B	C25	S41	O35	304.4	188.4
H25B	C25	S41	O36	174.2	51.6
S41	C25	H25B	H25	120.0	120.0
S41	C25	H25B	H25A	240.0	240.0
H25	C25	H25B	H25A	120.0	120.0
C22	N30	HN30	C23	180.0	180.0
HN30	N30	C23	N31	180.5	180.1
HN30	N30	C23	O33	0.7	359.9
HN31	N31	C23	O33	0.2	0.2
C23	N31	HN31	N28	180.0	180.0
C17	N32	HN32	C24	180.0	180.0
HN32	N32	C24	O34	177.8	184.9